FastQCFastQC Report
Sat 31 Dec 2022
SRR5847061.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847061.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106133
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGCCGTCT6870.6473010279554898No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGC6220.5860571170135584No Hit
CACAATGGGGCTGATGTATAGAAACTATATTAAACTTCCAAAGAAAGCACGT1830.17242516465189903No Hit
GCCAAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1440.13567881808674023No Hit
TTGCAGAGGGCATGTTTCTCACATTGCTGTATTTTAGAAAATAGGGGTTAAG1350.12719889195631898No Hit
GGCACTGGGTGGGTGACGCGCAGCACGGCGGGCCTGGGCCTGGTGTGTGGGC1340.1262566779418277No Hit
CCAAGTGGGGATATCATCTCAACTTAGTATTATACCCACACCCACCCAAGAA1320.12437224991284519No Hit
TCACCGGGGAAAGACAAACACTTTCCTTCTTATCTCAAGATATTTACCTACG1310.12343003589835395No Hit
TCGTTGGGGATTCCGTAACCCAGATGATGTCTTCAGGGAATTTTTTGGTGGA1310.12343003589835395No Hit
TTGCCTGGGGGCCAAGATGGCGGCAGCTGCGGCTTCGCTTCGCGGGGTAGTG1310.12343003589835395No Hit
GAACGAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1300.12248782188386269No Hit
ATTCGAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1280.12060339385488021No Hit
TAGTATGGGAGTGAATATTGCCATTATTATAAAATATCTATTTACTAAGCCT1270.11966117984038895No Hit
CCTCATGGGATATCATAGTGGCCCAGGTGGAGGATCTAATTAAACTAAAAAG1260.11871896582589771No Hit
AAGCACGGAGGAACTGTAAGCTTTTATCTTTTAACCAACTGAACAATACACC1250.11777675181140644No Hit
TGATTTGGGGTTGCTGTTTGTATTTCTTTCACAGTTTTGATAATATCACATC1240.11683453779691519No Hit
TTTGGCTGGGAGGCATTTGGTTTGCTTCCATCTTTTTTTATGCAGTGCCTGT1240.11683453779691519No Hit
CGTAAGGGGCTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAG1230.11589232378242394No Hit
GCAAAGCGGGACGTTGCTTCGACAGCAACTGGATGATGCTCACAAGAAAGCT1220.11495010976793268No Hit
ATGCAAGGGCTCATCTGGTAGTCCATTACTCTTCTCAGTCTATTTTTACATT1220.11495010976793268No Hit
CTGCATCGGGTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGC1220.11495010976793268No Hit
CATCAAGGGGAGGCAGTTCAAATTCTCACCACCTTCTTTTCTCTCTTACAGC1210.11400789575344143No Hit
TTTATTGGGGCTCTTCCGATCTCTTTAAGGGGAGGCATTGAGGCAGCCAGCG1190.11212346772445894No Hit
GATGTAGGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCG1180.11118125370996768No Hit
CATAATGGGGAAGAAACAACATGATTTATTAAAAAGAATGTTACAACAGCAG1170.11023903969547644No Hit
AATTGCGGGTATGTGCTTCCAAGTTCTGCTTGCTTTAGAAATCTTTACATTT1170.11023903969547644No Hit
TCTTGGGGGATCGCTTGAGTCATTTTTATCACAATAATCCTACTGTGAAGCT1170.11023903969547644No Hit
CACATTGGGTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAG1160.10929682568098517No Hit
TATAAAGGGGATCTTTCAAAAATTAAAGCAAAATAAAGAAATTCCCAGATAA1160.10929682568098517No Hit
GAACAAGGGATGAATAATCTTTATCTGCAGGATGGTGGATTGGTAAATTAGG1160.10929682568098517No Hit
AAGCAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1160.10929682568098517No Hit
TACTAGGGAACTGTAGTAGGTGTGTAGTTTGGGGAAGTCAAATGGCCATTTT1160.10929682568098517No Hit
CTTACTGGGATATGATCCTATATCTAGAAAACCCTGTCATCTCAGCTCAAAA1160.10929682568098517No Hit
AGCAAGGGAGAATGGCTAATACTAAAAGGTTTAAAAATAACAGATGCTGACA1150.10835461166649393No Hit
ACGCCAGGGTGTGTGTGTCATGCACATCTGTGTGTTGCATAGCATAAGCCAA1140.10741239765200267No Hit
TTCAATGGGAGAATTTAACATCCATTCCAATGTTGGAGGCTTGTATTACTTA1140.10741239765200267No Hit
CGAGTTGGGAATGGAATGAAACTAGAAATCAATAACAGAAGGAAAACTGGAA1140.10741239765200267No Hit
AACTGAGGGAGTATTACAAAGAAAAATGCCCAGAAACTTTGATTTGAGTTGA1140.10741239765200267No Hit
TCCTAAGGGCCGTCTTTATAGATTTTCCTTTTCTGGATACTTCGTACAAATA1130.10647018363751143No Hit
TCAACAGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA1130.10647018363751143No Hit
GACTAGGGTGGCGCTGGGCAATAACAAATGGAAAATATTTGCAATTTTTGTC1120.10552796962302016No Hit
GCATTGGGAGTGCATTTTTTGTTCTATTTTTAGTGTAGATTTAAGCACTTTG1120.10552796962302016No Hit
GAGGCAGGAGAATTGGTTGAGCCCAGGAGATGGAGGCTGCAGTAAGCCATGA1120.10552796962302016No Hit
CATGCAGGGTCTGGCTTCGGGATATCAATTGATAGTAAAATAAGTAAGTTGT1120.10552796962302016No Hit
CGTCTTGGGATCAGGTAACCTATAAAGGAAAACCTATCAGATTAACAGCAGA1110.10458575560852892No Hit
CGTAGTGGGAAGAAAGAAAGAGGAAGAGAGAGGGAGAGAGAGAAAGAAAGAG1110.10458575560852892No Hit
TTGCATGGGAAAGAAGTTTCTCCATTGTCTTACTAACAAAACCTTTTGGGTT1110.10458575560852892No Hit
ACACGCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1100.10364354159403766No Hit
TGAAATGGGTGGCAAGGAAATATGTTTAAAGCCGAGAACTAAAATAGCTTTT1100.10364354159403766No Hit
CATCACATTGCTTATCTGTAAATTCCCACTCCGAAAGTGAGAAGACTGGATC1090.10270132757954642No Hit
CACCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1090.10270132757954642No Hit
AGAAAAGGGATGGTCGGTGGGAGGAAAGTCTGATGGTTTCCGCTGCTAAGCG1090.10270132757954642No Hit
TATCGTGGGTTTCATGACAAAAGAACTACTCAGTGCTGAAGCAGTGTCAGAA1090.10270132757954642No Hit
GCTCTAGGGGGAATTGAGACCGGAGGGAATCTGGCCCCTAGAGGCTGGTACT1080.10175911356505518No Hit
GTGGTAGGGTGAACTTGATTAAGGTCACCCATCAAGAAAGACAAACACTGGT1080.10175911356505518No Hit
GTAGTAGGGAGAACTTTGAGGGACAGTCTCCCTGAAAATGGATAGACTGATG1080.10175911356505518No Hit
GAACTAGGAATCTTAGTTTAAACTAGGCTTTAACTGCCAGATGAGGTTTATA1070.10081689955056392No Hit
ACAGGGGATCCCATAAGTCAAAAATAATAATAAGTGAGAAAAACAAGTTGCA1070.10081689955056392No Hit
TGAATAGGTGGAACATTTTCAGCTTGTTAAAATTTGTGAGTTTTGATGTTGT1070.10081689955056392No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)