FastQCFastQC Report
Sat 31 Dec 2022
SRR5847057.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847057.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131078
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGCCGTCT12650.9650742306107813No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGC9320.7110270220784571No Hit
AGCGGTGGGGAATGCTTTGAAAGAAACTAATCAGAATCTTGGAACATCATGA2120.16173576038694518No Hit
CCTCCTGGGGGCATTCATATTTTTAGGACTGAATTCAAAGGGAAATGCTTCT1940.14800347884465737No Hit
ACCTCTGGGGAGGACAGGTGTGTTGGGCGTGTTGAGAGCCTTGAAGTGACTA1870.14266314713376768No Hit
TTAGGCGGGTGAGCCAATTCATTTAATTGTCAAATGTCTATATCCATGGTTT1790.13655991089275088No Hit
CACGCAGGGAGCTCCATGCCAGTGGATCCAGGCCCCAAGCTTACATTCAGGG1750.13350829277224247No Hit
CGTGTTGGGCATGTGAACAGCATAAGTTTGGAGCACTAGTTTGATTATTATG1750.13350829277224247No Hit
TCGAGACGGGTGGTGAAATGTCATTGCTATGATTATAGGTCCCCAATGATTG1750.13350829277224247No Hit
AGACAAGGGTATTGCTATAATTCACATTTACTGAAGAACTTGTGGACTATTG1660.12664215200109857No Hit
CTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCCTGTCTCTTATAC1650.12587924747097148No Hit
GTATGGGGCCCCCACAACAGGCCCCAGTGTGTGATGTTCCCTTTCCTGTGTC1650.12587924747097148No Hit
GAACTAGGGTGCAAGATTCAAAACTGAAATATGTGTAGCTTTCTTACTAGCA1640.1251163429408444No Hit
CATCAGGGGATTACAAATAACAAATATACGAACCCACGTTCTATATTTTGTT1640.1251163429408444No Hit
CAGCATGGGAGTCGCAATAGTGTACCTAGTTAAATATGGCTTTATTTTTGGA1590.12130182029020888No Hit
CTAAATGGGCACTGTCATTTTAGGTGTATTTTTTTGCAGAGTACAACATGTA1590.12130182029020888No Hit
CTACTAGGGGAAATGAAACATGGCATGCAGTGATCCGGGTGTTCAGTTCTCC1570.11977601122995468No Hit
GAGAGTGGGAACGCGGGAGCTGGGAACATGTGCATCCGTGACTCAAATTTTT1560.11901310669982759No Hit
TAATCTGGGTAGGCAATGGCTTTCAACATTGTCATTTAAGGCAAAATGTTTG1560.11901310669982759No Hit
CGACAAGGGATTGCAAGAGGCGAGTTTAAAATTCTGCAGATGGCCTTATTTG1550.11825020216970049No Hit
ATGATGGGGTAAGACGGAGGTCACTGGTGACCACATTCCCACTCCGCAAGAC1550.11825020216970049No Hit
AAGGCGGGGAGCGTCGCAGCAACTGAGACCAGGAAAAGTCTGCCCCGGCTGG1540.11748729763957338No Hit
TGTAATGGGGTACAGAATGGACTCAAAAAGGCAAATTTAAGGGTTATTGGAC1530.1167243931094463No Hit
ACAATGGGGGGAACAAAGATAAGAATTATATCTGACTTCTTCTCAGAAACCA1530.1167243931094463No Hit
AGTAGAGGGGGGTTTCGGCCGCCCAGCCCGTCTCTGGGGGCTGCGAAGGCTC1530.1167243931094463No Hit
AGCAATGGGCTGTAAATACCTCAGTAATATGGGTCCTTTCATTTTTCCAGCC1520.11596148857931918No Hit
GTTCAAGGGGGGACACTGTGTAGAGTCACCATTCAGAAGACTTGGCGAACTG1520.11596148857931918No Hit
GAGCAAGGGGGTGAAAGTGCAAAATGAAATCTCTTGTTCTTTTCTTTGGTCA1510.11519858404919207No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCCTGTCTCT1510.11519858404919207No Hit
GCATACGGGACTGTTAAACGTGTGACAGGAAAATCGAGTTGAGACTGCCATG1500.11443567951906498No Hit
CAGAAGGGTCTGGCAATGGGCAAGAAGACTGCTCTTGACTGATAACAGCTCT1490.11367277498893788No Hit
CAGTTTGGGAAGAGAACCTGGGTATCATCTAATTAGCCCAACGGTGACAAAT1490.11367277498893788No Hit
ATGATGGGGTAAAAACCAGCATTATGATTAACTTTTTTTTATAACTTTTATA1490.11367277498893788No Hit
CTCAATGGGGTGATTGTACAAAAGGAAGCTGATACTTGTTTCTGGCCAGTAC1490.11367277498893788No Hit
ATGCGAGGGCATCAATGCCCAGATACAGATGAACAAGTATCAAGAAAATCCA1490.11367277498893788No Hit
ATTAAGGGGATACAGCCGCGAGGCTAAAAAACGGATTTCCTCTTCCTAGCTT1480.11290987045881079No Hit
CACCTTGGGAGTTTCAGACAAAACAGACTTTAAGCCAACAAAGAAAAAAGAC1480.11290987045881079No Hit
TCCGTGGGGAGAGAGAGAGAAAGAGAAAAAAATATATAACAGATGAAGCAAA1470.11214696592868369No Hit
GCAATTGGGAGGATTTCTTTAACAGAACGAGTTGTGGTTCGAGAAGGATTTC1460.11138406139855658No Hit
TGTACTGGGACCTGAGGTAGAATTTAGAATTACTGCCCATTTTAAGAGTGTG1450.1106211568684295No Hit
CACCACGGGTGAGCAGGACTTTCCTTATCCCAGTTGATTGTGCAGAATACAC1440.10985825233830239No Hit
GACAAGGGGATGGCTTGTATTTAGTTGTTGTATCTGTTAGATCTTTCAGTCT1440.10985825233830239No Hit
TCTAATGGGATAAACATTTTGGTAAAAATTACGTAAGCAACAAAATGAATTA1440.10985825233830239No Hit
TTGTCGGGGGTTGTAAAAAGGAAGAGACCACTGATACATGCAACAACCTGAA1440.10985825233830239No Hit
ACGTCCGGGTCATGCTGTCAGGCTTAATTGGCCTAATTGCTTCTAAAGCAAC1420.1083324432780482No Hit
GCCTATGGGCGATCTGACAGGGGGGATAATGCAGGACTATCAAGAAGTGAAA1420.1083324432780482No Hit
CGCCAGGGGTATCAGGAGACCAAAAAGAAATAATATCTTATGATGTAAAAGA1420.1083324432780482No Hit
GCATCAGGGCACCAGAACTAATATACCAAACAACCAACCAACCAAAGAAAGC1410.10756953874792108No Hit
GTAACAGGGTAGCCAGATCTGTATTACCAGCCCAGTTCTCACTTATTTTCCA1400.10680663421779399No Hit
GGTAGCGGGCTATAAAATTTCATTCACATTTCCTCCCTTCTCCCACATCCTT1400.10680663421779399No Hit
ACTAACGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1400.10680663421779399No Hit
CGCATAAGGGTACTCTCAAGTCACTAACCTTCCTCTTTGATCTCTTTGTAGG1390.10604372968766689No Hit
GCGGACGGGGTGATGGAAAAGGACTGAATGATCCAATAAAGAAGACTTGGTG1390.10604372968766689No Hit
GTTGTCGGGATTGTTTAAAGTGATTACATTTAACGTCCTCTCCCATGACTTC1390.10604372968766689No Hit
TCAAGCAGGGCCGATCTAATGGCGGGAGAAGAAGCCCTGAAAAGAAAGACTT1390.10604372968766689No Hit
GCTCATGGGTGACCTTTGAAATTTGCATGTGACCTCATCTAGCTATGAATTC1380.10528082515753978No Hit
TCCACTGGGCGATCTGTTTCTGGGCAATCCCAACCTGATGAGCTTTATTACA1380.10528082515753978No Hit
CTGCTTGGGATACTGGAAGTTCAAGGCACAGCAGGCCGTTGGACAAGGACAA1370.10451792062741269No Hit
TGGAAATGGGAGGGTATTCTTCAGGTGCAAAGAAAATAAGCCTAAATGGCAG1370.10451792062741269No Hit
GTGGCGGGGTTGGTGATGATGTGGGCAAATCAGACTAAGCTTTTAATGAATA1370.10451792062741269No Hit
TTTCATGGGGTGTCAGATTCTGTGTCTGTGTCGCCTCAGTTTCCTTATCTGT1370.10451792062741269No Hit
TGCTTAGGGGTGTCTCCAGAACATCTTGTAGAGTCATTTCATTTAACACAGG1360.10375501609728559No Hit
TGTGCTGGGATTACAGGCATGAGCCACCATACCTGGCCATGCGTTCATTTCT1360.10375501609728559No Hit
GGACTTGGGCAAAGCTTGCTATGTGAAAATCCCCACATAACCATTGAAGTTT1360.10375501609728559No Hit
GGGCTGGGGGAGAAGATAGAGGCAGAACTGCAGGACATCTGCAATGATGTTC1360.10375501609728559No Hit
AAGCGGGGATGTAATGGAAGCCAAATTAAATTGATACAGAACCCATTTCTCA1360.10375501609728559No Hit
ATTTAGGGTTTCTGACTCCTGGAAGGAACTGGGCAGTCCCACCAGAGCAGAA1350.10299211156715848No Hit
TATTAAGGGGGAAATACTAGCTACCCTGAAAAACCAGTTGTTTGGTAATTGA1350.10299211156715848No Hit
CAGCTAGGGATCCCTGTTGTTTTTGAGTTGGTTTTGGAATGGATTCAAGTTC1350.10299211156715848No Hit
TACTAAGGGATGAGCATTTTCTTTGATTGTCAAGTTAACACTCAAAAAGTTT1340.1022292070370314No Hit
TTGAGAGGGAGGAAGGGCCGGAGGCTGCACGGCGCTGCAGCAGAGTCTGTGT1340.1022292070370314No Hit
AAAATACATAAGGGACACAAAAAACTCAATAGCAAGGAAACAAAGAATCTGA1340.1022292070370314No Hit
AGCAGCGGGAGCCAGTATATTTGTTTTATTTATTTTTTTTAAGAAGAAAAAA1340.1022292070370314No Hit
GTACAAGGATATCAAAAAGAATAAAATACCTAGAAATAAATTTTAACAAAGA1340.1022292070370314No Hit
TATGAAGGGGCACACAGATGTGAATTAAATGATCACACAAATAAATATTTAA1340.1022292070370314No Hit
TTCTATGGGTATTTCCAACACTTTACTTTCAGTCTATGCACATCCTTAAATC1330.10146630250690428No Hit
ATGCCAGGGACCATATTTTTATTAGTCTCATTTCCTTAATTTTTACTACCTC1330.10146630250690428No Hit
TCTAACGGGATTTCCTTGTAGCTTTATTCCTTGCATCTTTGGGTCTACTGAG1330.10146630250690428No Hit
GCTGCCGGGGCAGGGAGGTCTGGTTTGGTTTTCATCAGTCTGTGAGACCTGC1320.1007033979767772No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)