FastQCFastQC Report
Sat 31 Dec 2022
SRR5847055.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847055.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences150135
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC8410.5601625203983082No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT6660.443600759316615No Hit
TGCAGCGGGAACTCAATCACAGACCCAAATATTTTCAGTAGGCAATGGTTGT2550.16984713757618145No Hit
GCAAATGGGGGAATCGGTTCCCGGGTGATCCTCGCGCCTGCCGCTGCTCGGC2150.14320444932893728No Hit
TCGACCAGGGTAGCTTCTTTGGTGGCGAACTTGGATTGTGATGCCCTCAGGA2140.14253838212275619No Hit
ATTGTAGGGTTTCTTGTATTTCTATATACAAATAACAACCTAGATGAAAAAT2130.1418723149165751No Hit
AGCTATGGGTGGGAGTGCCCTGCAGAGTCGCTGTGCTCAGGTGCTTTCTGTG2120.14120624771039397No Hit
TTTGAGGGGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCCAATATC2070.13787591167948846No Hit
AGTAGTGGGCTTATTTCAACTGGTTATTGTAAACGCTGCTTACTAGAGACAT2040.13587771006094515No Hit
GCAATAGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC2010.13387950844240185No Hit
AATGCAGGGCGATCTTCGTGTGGGGATGAAGTAACATGATCACATCATCAAC1990.13254737403003963No Hit
GACTAGGGGGATACCCTAAATAACCATAGTTGTCAGTCATTCTTTGAAGTTA1990.13254737403003963No Hit
TGTACAGGGGGCCTTGGAGGCGATGGCCCACGGGGCTGCTAGCCGTGCTGCG1970.13121523961767742No Hit
AGCTGGGGTGGGCAGGCGGGCGGCTGGCAGCTGTGGCGCCGACATGGCTGCG1970.13121523961767742No Hit
CAACATGGGACGCTCTTCCGATCTCTACTGCCGGGAGCTACATAGGGACTTG1960.13054917241149633No Hit
TCCAATGGGGAAATACTTAATTGTGCAGGTTGTAAAAAAGATTAGTGCATTT1930.12855097079295302No Hit
ACCTCAGGGAACTTAGAGAACCAAACAAAACACTTTTTTGTTTGTCAAGGAT1920.1278849035867719No Hit
CTTGCTCGGGATTCAAATGCATATAAAATACCACCATGTTACACTGTTTTCT1890.1258867019682286No Hit
TCGCATGGGCTGATCATTGAAAACTTATAAACCTAACAGAAAAGCCACATAA1890.1258867019682286No Hit
GATCGCGGAGCCGGTTCAGGGGCTGGCGCGCCAAGTCCGGGATATCCGACGT1870.1245545675558664No Hit
AACTCTGGGATTGGGAAGTGTGTGATTTCGGCAGACCTGCTGGGAAAATTTA1860.1238885003496853No Hit
GATGCAGGGGATGAGTTTCGTGAAGCGATTTCCTGCCGCTGATTTAAAGTGT1860.1238885003496853No Hit
AGACTCGGGCAGGCGGAACCAGCAGTTGGAGGAAGAGAACAATCTCTTGCGG1860.1238885003496853No Hit
AGAAAGGGGGATCTTCTTGTGGGAGTGGAAGGAGGAGGGGCGAAAGTACGCC1850.12322243314350419No Hit
GCCAATGGGTACCTTGCAAAGGTCCCATCTTCAAATACTATCGTATTGGGAC1840.12255636593732308No Hit
AGTGGGTGGAGAGCATGGGTGGTAAAGTACCACCTGCTACTCAGAAAGCTAA1840.12255636593732308No Hit
ACTAAAGGGATTCCCTGCCTGTGCAATCCTTTGTATTTCCTCCATGCCTTAT1840.12255636593732308No Hit
GCAGCTGGGATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATC1830.12189029873114197No Hit
AGTATGGGAGATGGAAAATAAGAAGATGCACTTTCTGTAACTTTGTCTAAGG1820.12122423152496087No Hit
GTAACAGGGCGATCTTGAAGCGGGTAAAAGTGGCCTTTCTGTTACGTCTGTG1810.12055816431877976No Hit
GCTCTATGAGGTATGAGCCAGGGATCCTTTCCTGGTCCCTAAGATCAAACCC1800.11989209711259866No Hit
TGACAGGGCAACTTAAAAGTCAGTAGATACATTCATCCCTAACAAGAGTCAG1800.11989209711259866No Hit
TAACTTGGGTCTTGAAATAACCAGGCGATACTTTGTTTTGTATATATTTGTG1800.11989209711259866No Hit
TAACTTGGGTGGCAGAGATGGTTTTTTAATGAAATCCCACCATCTATCTGAG1780.11855996270023646No Hit
ACTATAGGGACTTCTGACATTTGTAGACTCCTGGCGGGTGCAGGGAGGGGCA1780.11855996270023646No Hit
GGCTACGAGAGAGAGACAGGGGCAGTTTGAAGCTTTTATCTCCCTCTTCACT1780.11855996270023646No Hit
TTAGAGGGGACTGATCCTAGCTCTGGCCTGTGAACTATAGTTTTCATTTTGC1770.11789389549405535No Hit
ACTTCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1760.11722782828787424No Hit
CACACAGGGGTGGGACACATGATTACGTATTGTGCACAGGTTCACTTGGTAA1760.11722782828787424No Hit
AATGCTGGGGGAAATGCTGTGAAGCATCAGATGACCCATCACTCTTTTGCCT1750.11656176108169314No Hit
GTTACTGGGATCATGATGGAGACTTTGGAATTACGCTCGCAGAGCTGCGGGC1740.11589569387551203No Hit
AAATGCGGGATTGGCTTCCTAGGGTTTATCGTGTGAGCACACCATATATTTA1740.11589569387551203No Hit
CAAACACGGGCGATCTCAATAAGGGGCTGCTAGAGTCTGTGCCGTGCTGCCT1740.11589569387551203No Hit
CCATGGAAGGGTATAGATACCACCGTGTAATAGAAGACTTAAGTCAATGAAA1740.11589569387551203No Hit
GGCCTGACGCCTGAGCAGCGAGTAGACAAGATTTTCAGCAAGATGGATAAGA1720.11456355946314982No Hit
TTAGAGGGGAACAAATGAAAGTTTGCTGTGTGATTGCAGTTTTAAATTATAA1720.11456355946314982No Hit
AAAGTAGGGTGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC1720.11456355946314982No Hit
TTTGCCGGGGATCTTCTTCTGAACAACTTAGGAGAAACTTTTGATCTTCAGC1720.11456355946314982No Hit
CACTAGGGGTCTGGATGGAGGGCAAGTTACCATGCACTCCCAAGATGTACGA1710.11389749225696874No Hit
CGACCTGGGATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTT1700.11323142505078763No Hit
CGTTGCGGGCGCTCTTCCGATCTTCATGCGGGGAGGCATTGAGGCAGCCAGC1700.11323142505078763No Hit
CATTATGGGTGGTGACTGGTATCAAGGTTGTCGATCTGCTAGCTCCCTATGC1690.11256535784460653No Hit
GGACATGGGGACTGTGCCCGGAGGGAGGCGGCGGTGGCCAGTAATGCCTGGG1680.11189929063842542No Hit
TTTAAGGCGGATTGAGTTTACCTGATTAAACTTTAAAAGTTAATTGTAGATT1670.11123322343224432No Hit
GATATAGGGACACCCAGAAGACGTCAGGTGACTTCAGTCCTGCTGCAGTTGT1670.11123322343224432No Hit
CTATCAGGGACTTCCTGGAGCATGGCATCCCCCCCAGCTGCTGCATGAACGA1660.11056715622606321No Hit
GCTTTGGGGATCTTTGGCGGGGAGAGGAAAAAAAGGAAAAAAAAGGTTTAAA1650.1099010890198821No Hit
GTATCTGGGGGGTTTATGTGGTTTTCCAGAGGAAGACCACGGAGTGAAATTG1650.1099010890198821No Hit
GATTTAGGGAAGCAGCTTCGTTATATATTTTAAGAATTGGTGGCTGACCATG1650.1099010890198821No Hit
CAACCTGGGAGAACACATTGCAAGCAACTCGCAGTCCGAACCAGTTCTTCAT1650.1099010890198821No Hit
AGCCAGAAACAGACCATGAAACAAACAAGCAAACAGAAAAGCAAACACTCCC1650.1099010890198821No Hit
TATGGTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1640.109235021813701No Hit
GTCAATGGGAGTCCAGGAGATGTACAAATAATATCCAAAGTCTGAAGGCTTA1640.109235021813701No Hit
GGTTTTGGGGGGATGTCGCGGTCTCGTGGTGGAACATCTGACCCTTTTCAAG1630.1085689546075199No Hit
AGGTCAGGGATACAGTCGCCCCCTAAAATTGGGAATTGGGTTCATTCCAATG1620.1079028874013388No Hit
TCCGAAAGGGTGTGTGGAAATAATGTAGCTGTCTATTGGATGCCACTATTAG1610.10723682019515769No Hit
TGGCGGGCATGAAAGCTGATGCCAAGGCCAAAAGAAGTTTAAAGCATCTGTA1610.10723682019515769No Hit
AGAAGAGGGGGGGGATTAACTTTGCATGAATAATGTGAGTGCGCTTGGAAAA1600.10657075298897659No Hit
GGTGTTGGGTAATTCTTGCCCTGCATCATGCATTTGGCAATATGTCACATAG1600.10657075298897659No Hit
CGTTGGGGGTGTACCTATGCATTTTCTGACTTTCTTGTTCTTTAAACTTCAT1590.10590468578279548No Hit
TGCAGTGGGATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTG1590.10590468578279548No Hit
TTACAAGGGCTGTGTGCAGACTGCGCCATTGGTGGGCAATAGCGTTGACAAC1590.10590468578279548No Hit
TGGCCTGGGGCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAA1590.10590468578279548No Hit
TTGTGCGGGGACCAAAATGCACAAAAGAGATGTAGAACTGGGATGGCAGTCA1580.10523861857661437No Hit
GTTTCTGGGCCAGGAAGAAAATTTTAACAAATTCCAGGAAACGAAAATTAAA1580.10523861857661437No Hit
TTGAAAGGGACCTCCCAACACGACCCAAGAGCAGGTTTACAATGCATGTGCG1580.10523861857661437No Hit
CGCAAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1570.10457255137043327No Hit
TTAGGGATGGGAGAACTGGGCTGTGACAGGCAATCCGAAGAGCAAATGAAGA1570.10457255137043327No Hit
ATGCCAGGGGGAACTGTAAGCTTTTATCTTTTAACCAACTGAACAATACACC1560.10390648416425216No Hit
TATTTGGGTATAAACTCAAATCTATTTTATCCTTCATCTGTTTGGATTGATG1560.10390648416425216No Hit
TGTGCTAGGGAGAATTTTAAAGTTTTTTTTTGATTGTTGAAGCATTTATCTT1560.10390648416425216No Hit
ACTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1560.10390648416425216No Hit
TAGCCCAGTTTATTTTGAACTCAGTGTTGTTACATGGTCAAGCCGCATAAAA1560.10390648416425216No Hit
TTATGAGGGATATGGCATTTTCTAACTTAGGAAGCCACAATGTTCTTGGCCC1550.10324041695807105No Hit
ATAATAGGCACCAGGGCAATTGGGCAAGAGAAAAAAAATAAAAATATCAAAA1550.10324041695807105No Hit
ATCTAAGGGAAGACTATAAGTTTCTATGATATTTTCCCCAGGATTCCATTTT1550.10324041695807105No Hit
GTATAGGGGATTTAACAACTGGAGTATTAGCCACATGGGTTATTTTTTCAAT1540.10257434975188998No Hit
ATTTGTGGGCCTTAAGCGTTTGAATGTAAATACTTCTCCCCACCCCGAATAA1540.10257434975188998No Hit
CTACCGGGAGGCCACATGTGAGGACACAGATAGGAGGCGGCCATCTGCAAGC1540.10257434975188998No Hit
AACAGCGGGATGGAATGAAATGGAATGAAGTGGACTCTAATGGAATGGAATG1540.10257434975188998No Hit
TGTTAAGGGACTTGTAAAGCCTTTTACACCAAGTGTCAAGGAGATTTCTAAT1540.10257434975188998No Hit
AAACACGGGCTATCAGCGGGACTGACCCATATTATGTACAGCATTTCTGATC1540.10257434975188998No Hit
CTGTACACGGGGCCCCAGAGTCTCTGTTCATCAGAAACTGGGTACAGCCTAA1530.10190828254570887No Hit
GTAACCGGGCAGTTCCTTGATTCTGCAGATACTGCTGCTGTTTTACGATTTC1530.10190828254570887No Hit
GTGTGCGGGTGGTCAGTGTGCAAAGAAAAGAACTGCTTGCATTTCTTTATTT1530.10190828254570887No Hit
CTGAAGAGGGAGTGCACCTTGTGTTTGACAACAGTGTTACTCCGGGTGCAGA1520.10124221533952776No Hit
ACACCTGGCCAACTTGGGATTTTGAGGCTGTTTTAATCATTCGTACGCATCA1520.10124221533952776No Hit
AAGACAGGGCTGATAATTTTCTGATCCAGAAAATACCAGCAGCTGCCAAACT1510.10057614813334666No Hit
TAGTTAGGGAATATCTTATGATGTAAAAGATGCTATTGGGATAAGTTTATTA1510.10057614813334666No Hit
GCAGTGGGGTATATGTTTGTAATTCCATAAAATTGGGATGATGAATATAATT1510.10057614813334666No Hit
CGGCAAGGGATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTA1510.10057614813334666No Hit
ATCAACGGGTTATATTCTGAAATTTTGTGATTTACTTATAAATCTTCAATGG1510.10057614813334666No Hit
TTAATTGGGAAGTACTTTATATATTCCCTAAATTAATCCTCCCAAAACCTGT1510.10057614813334666No Hit
CCACCTGCTCACCGCCAGTTAGCTTTTCCCAGGATGGTGGTGGCACTGATCA1510.10057614813334666No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)