FastQCFastQC Report
Sat 31 Dec 2022
SRR5847053.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847053.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences148210
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC7650.5161595034073274No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT6360.4291208420484448No Hit
ATTGTAGGGTTTCTTGTATTTCTATATACAAATAACAACCTAGATGAAAAAT2420.16328182983604345No Hit
TCCAATGGGGAAATACTTAATTGTGCAGGTTGTAAAAAAGATTAGTGCATTT2330.1572093650900749No Hit
TGCAGCGGGAACTCAATCACAGACCCAAATATTTTCAGTAGGCAATGGTTGT2320.15653464678496729No Hit
AGCTATGGGTGGGAGTGCCCTGCAGAGTCGCTGTGCTCAGGTGCTTTCTGTG2050.1383172525470616No Hit
AGCCAGAAACAGACCATGAAACAAACAAGCAAACAGAAAAGCAAACACTCCC2040.137642534241954No Hit
AGAAAGGGGGATCTTCTTGTGGGAGTGGAAGGAGGAGGGGCGAAAGTACGCC1950.13157006949598543No Hit
AATGCAGGGCGATCTTCGTGTGGGGATGAAGTAACATGATCACATCATCAAC1900.12819647797044734No Hit
TAACTTGGGTCTTGAAATAACCAGGCGATACTTTGTTTTGTATATATTTGTG1890.1275217596653397No Hit
CCATGGAAGGGTATAGATACCACCGTGTAATAGAAGACTTAAGTCAATGAAA1880.12684704136023212No Hit
TCGACCAGGGTAGCTTCTTTGGTGGCGAACTTGGATTGTGATGCCCTCAGGA1870.1261723230551245No Hit
GCAAATGGGGGAATCGGTTCCCGGGTGATCCTCGCGCCTGCCGCTGCTCGGC1860.12549760475001687No Hit
GTAACAGGGCGATCTTGAAGCGGGTAAAAGTGGCCTTTCTGTTACGTCTGTG1850.12482288644490924No Hit
CAACATGGGACGCTCTTCCGATCTCTACTGCCGGGAGCTACATAGGGACTTG1850.12482288644490924No Hit
GTCAATGGGAGTCCAGGAGATGTACAAATAATATCCAAAGTCTGAAGGCTTA1850.12482288644490924No Hit
TAACTTGGGTGGCAGAGATGGTTTTTTAATGAAATCCCACCATCTATCTGAG1840.12414816813980163No Hit
GCAATAGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC1840.12414816813980163No Hit
TTAGAGGGGAACAAATGAAAGTTTGCTGTGTGATTGCAGTTTTAAATTATAA1820.1227987315295864No Hit
AATGCTGGGGGAAATGCTGTGAAGCATCAGATGACCCATCACTCTTTTGCCT1800.12144929491937116No Hit
GGCCTGACGCCTGAGCAGCGAGTAGACAAGATTTTCAGCAAGATGGATAAGA1800.12144929491937116No Hit
CGCACAGGGATGTTGTTTGAAGAGGAATTGATACTATGATGAAGGAAACAGG1800.12144929491937116No Hit
TTTGAGGGGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCCAATATC1800.12144929491937116No Hit
AGCTGGGGTGGGCAGGCGGGCGGCTGGCAGCTGTGGCGCCGACATGGCTGCG1800.12144929491937116No Hit
GCCAATGGGTACCTTGCAAAGGTCCCATCTTCAAATACTATCGTATTGGGAC1780.12009985830915591No Hit
GTACTAGGGCAGGTACATCTGTGAACACAACTGGCTATTGGAGGAAGCAAAA1780.12009985830915591No Hit
AGACTCGGGCAGGCGGAACCAGCAGTTGGAGGAAGAGAACAATCTCTTGCGG1780.12009985830915591No Hit
GGCTACGAGAGAGAGACAGGGGCAGTTTGAAGCTTTTATCTCCCTCTTCACT1780.12009985830915591No Hit
CTATCAGGGACTTCCTGGAGCATGGCATCCCCCCCAGCTGCTGCATGAACGA1770.1194251400040483No Hit
ATGCCAGGGGGAACTGTAAGCTTTTATCTTTTAACCAACTGAACAATACACC1740.11740098508872544No Hit
TTAGAGGGGACTGATCCTAGCTCTGGCCTGTGAACTATAGTTTTCATTTTGC1740.11740098508872544No Hit
CATTATGGGTGGTGACTGGTATCAAGGTTGTCGATCTGCTAGCTCCCTATGC1730.11672626678361783No Hit
AGTATGGGAGATGGAAAATAAGAAGATGCACTTTCTGTAACTTTGTCTAAGG1730.11672626678361783No Hit
CACACAGGGGTGGGACACATGATTACGTATTGTGCACAGGTTCACTTGGTAA1720.11605154847851022No Hit
TGGCGGGCATGAAAGCTGATGCCAAGGCCAAAAGAAGTTTAAAGCATCTGTA1720.11605154847851022No Hit
GTAGTGGGGAAGTAGTGGCTTTCTGGATGGTAATTCCATCTTAAGGTGTCAG1720.11605154847851022No Hit
CAATTCGGGCAAATACAATGAATATAGGCAGAGCATATAGAGTTTGTAGATT1710.11537683017340261No Hit
GCACTAGGGAGACTTGATGATGAAGTAGGTGGTCCTGAAAGTTAACAGGAGG1700.11470211186829497No Hit
AGTAGTGGGCTTATTTCAACTGGTTATTGTAAACGCTGCTTACTAGAGACAT1700.11470211186829497No Hit
TTTTGCAAGGGTCTCTGAAGGTACTGTCGTCTTCCACTCCCGCTTTATTTAC1690.11402739356318736No Hit
CGCAAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1680.11335267525807975No Hit
GCAGCTGGGATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATC1680.11335267525807975No Hit
CTTGCTCGGGATTCAAATGCATATAAAATACCACCATGTTACACTGTTTTCT1670.11267795695297214No Hit
CGTTGGGGGTGTACCTATGCATTTTCTGACTTTCTTGTTCTTTAAACTTCAT1670.11267795695297214No Hit
AACACCGGGGCATGCTGCCCTGTCCGGAGCTGCAATCTAGTCCTGCCTCCTG1670.11267795695297214No Hit
AAACACGGGCTATCAGCGGGACTGACCCATATTATGTACAGCATTTCTGATC1670.11267795695297214No Hit
GCTTTGGGGATCTTTGGCGGGGAGAGGAAAAAAAGGAAAAAAAAGGTTTAAA1660.1120032386478645No Hit
CAATTTGGGCTTTTCAAGGAAGCCTGAATCCTTTTTGCATGGCTTAGATGTA1660.1120032386478645No Hit
ACTAAAGGGATTCCCTGCCTGTGCAATCCTTTGTATTTCCTCCATGCCTTAT1660.1120032386478645No Hit
GTCAAGGGTTAGGTTTATAACTGATTACTTTTCTCAGATTTGTTGTAATTTC1650.11132852034275689No Hit
CGGCAAGGGATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTA1650.11132852034275689No Hit
TGTACAGGGGGCCTTGGAGGCGATGGCCCACGGGGCTGCTAGCCGTGCTGCG1650.11132852034275689No Hit
AGAAGAGGGGGGGGATTAACTTTGCATGAATAATGTGAGTGCGCTTGGAAAA1650.11132852034275689No Hit
TTTAAGGCGGATTGAGTTTACCTGATTAAACTTTAAAAGTTAATTGTAGATT1640.11065380203764928No Hit
GATCGCGGAGCCGGTTCAGGGGCTGGCGCGCCAAGTCCGGGATATCCGACGT1630.10997908373254167No Hit
AAAGTAGGGTGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC1630.10997908373254167No Hit
TTTGCCGGGGATCTTCTTCTGAACAACTTAGGAGAAACTTTTGATCTTCAGC1630.10997908373254167No Hit
TCGCATGGGCTGATCATTGAAAACTTATAAACCTAACAGAAAAGCCACATAA1620.10930436542743403No Hit
ACCTCAGGGAACTTAGAGAACCAAACAAAACACTTTTTTGTTTGTCAAGGAT1620.10930436542743403No Hit
GTTTTAGGGAACTCTCAATTCCCTGAAAAACTAGTAATACTGTCTTATCTGC1620.10930436542743403No Hit
GCTATGGGCGATCTTTGCCTGGGGTGCCATAAAATTTCAGTAGCTACCTATT1620.10930436542743403No Hit
GATGCAGGGGATGAGTTTCGTGAAGCGATTTCCTGCCGCTGATTTAAAGTGT1610.10862964712232642No Hit
GTAATGGGGCTGGCTTTTGGCTGGTAACAGAACTCAGAGTGCACACTGTCAC1610.10862964712232642No Hit
AGTTTTGGGGAAATTTCCCTGACCCTAAATAATACATTTTGAAATGAAACAA1610.10862964712232642No Hit
CACTAGGGGTCTGGATGGAGGGCAAGTTACCATGCACTCCCAAGATGTACGA1610.10862964712232642No Hit
GCAGTGGGGTATATGTTTGTAATTCCATAAAATTGGGATGATGAATATAATT1600.10795492881721881No Hit
ACGACAGGGAGAAATGTTACTGGGAGGAGGAAAGGAAAATCACTTTTTTTCC1600.10795492881721881No Hit
GCTTCATTTATAATTAGAGCAAGAAAGTCCTGCTTGACATTGTATTGGAGCC1600.10795492881721881No Hit
CCACCTGCTCACCGCCAGTTAGCTTTTCCCAGGATGGTGGTGGCACTGATCA1600.10795492881721881No Hit
TATTTGGGTATAAACTCAAATCTATTTTATCCTTCATCTGTTTGGATTGATG1590.1072802105121112No Hit
GAAATTGGGATCTACAGCACGGGGCTGGCCTGTTCCTAATGAGCTACGCTGG1590.1072802105121112No Hit
AGCAATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1590.1072802105121112No Hit
TGTAACGGGTAAGGAAGAGAGATTACTTTAATTTAGCTTATGAGTCTGGAAT1590.1072802105121112No Hit
ATCTACGGGGTGAGATAATGAGAGAAGGCAGTGCTTTTGAGGATGACGACAT1590.1072802105121112No Hit
GCCTCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1580.10660549220700359No Hit
CTGTCTCCCCTCACTTGTCATATGCTCTGACATGCTAACATTTCTTTTGTTC1580.10660549220700359No Hit
GACTAGGGGGATACCCTAAATAACCATAGTTGTCAGTCATTCTTTGAAGTTA1580.10660549220700359No Hit
CATAAAGGGAAACCAGATATATGACTTGCAGCACTTCTAAAAGATTGAAAAC1560.10525605559678834No Hit
GCCAAAGGGGTTGAGTATTTATGGTATTGCACTTACACAACCCTGAAAAATC1560.10525605559678834No Hit
GGTGTTGGGTAATTCTTGCCCTGCATCATGCATTTGGCAATATGTCACATAG1550.10458133729168073No Hit
GGTTTTGGGGGGATGTCGCGGTCTCGTGGTGGAACATCTGACCCTTTTCAAG1540.10390661898657312No Hit
GTGCAGGGAATGCAAATCTGGCTCAGCATTCAAAAATTGATATATCCCACAA1540.10390661898657312No Hit
AAGACAGGGCTGATAATTTTCTGATCCAGAAAATACCAGCAGCTGCCAAACT1540.10390661898657312No Hit
ACACCTGGCCAACTTGGGATTTTGAGGCTGTTTTAATCATTCGTACGCATCA1540.10390661898657312No Hit
GGACATGGGGACTGTGCCCGGAGGGAGGCGGCGGTGGCCAGTAATGCCTGGG1540.10390661898657312No Hit
GTGTGCGGGTGGTCAGTGTGCAAAGAAAAGAACTGCTTGCATTTCTTTATTT1540.10390661898657312No Hit
GTTACTGGGATCATGATGGAGACTTTGGAATTACGCTCGCAGAGCTGCGGGC1530.10323190068146548No Hit
AGGCATGGGCCCACAGAAGCAGAGTTACAGGACATGATTAATGAAGTAGATG1530.10323190068146548No Hit
TTGATTGGGACTATCTAAAACCTAATTGCAAATTGACCACAGACCTCTAACC1530.10323190068146548No Hit
TGCCTAGGGGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAATCACTTGT1530.10323190068146548No Hit
ACTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1530.10323190068146548No Hit
AGCCAAGGCGGGTGGGTCACCTGAGGTCGGGAGTTCGAGACTAGCCTGACCA1520.10255718237635787No Hit
AGAGGGGATTTACAGTAGGAATAGACGTAGACACACGAGCATATTTCACCTC1520.10255718237635787No Hit
CTGAAGAGGGAGTGCACCTTGTGTTTGACAACAGTGTTACTCCGGGTGCAGA1520.10255718237635787No Hit
AGTGGGTGGAGAGCATGGGTGGTAAAGTACCACCTGCTACTCAGAAAGCTAA1520.10255718237635787No Hit
TTCGCCGGGGTAGAATGGAAGGCCAAAACTGAAAAATTCTGGCAAATTGCCC1520.10255718237635787No Hit
GACTAAGGGGAATGTTTTTGTGGAAGTTCTGTAACTGTACCAGAAATTGAAG1520.10255718237635787No Hit
TTATATGCGGGAGAGTGGAAGAACTGCAAAACAAGATTGTAAATTGTCTCAA1510.10188246407125026No Hit
ATTACTGGGAGACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGGCTGATT1510.10188246407125026No Hit
TAATATGGGATAGAGTCATAGATTATCAGATTCAAAACACAATTTGTAATTT1510.10188246407125026No Hit
GTCAATGGGAAAGGGCTGGACTACTATAAAAGTTACAAATACGTAGTTAGAC1510.10188246407125026No Hit
TAGCCCAGTTTATTTTGAACTCAGTGTTGTTACATGGTCAAGCCGCATAAAA1510.10188246407125026No Hit
ATTTGTGGGCCTTAAGCGTTTGAATGTAAATACTTCTCCCCACCCCGAATAA1500.10120774576614265No Hit
CTACTTGGGGTACACGATAAACTTACAGAAAACAAATATTAATTTTTTTATT1500.10120774576614265No Hit
ATCTAAGGGAAGACTATAAGTTTCTATGATATTTTCCCCAGGATTCCATTTT1500.10120774576614265No Hit
GGTATTGGGGTATAAGAAAAATAACCATTGTGGGGTTTTTGTGCATCTTATA1490.10053302746103501No Hit
TAGTTAGGGAATATCTTATGATGTAAAAGATGCTATTGGGATAAGTTTATTA1490.10053302746103501No Hit
ACCGCAGGGATGTTGGTTAGGGCAAAATACTAAGTATTCACAACTGTAGCAA1490.10053302746103501No Hit
AAATGCGGGATTGGCTTCCTAGGGTTTATCGTGTGAGCACACCATATATTTA1490.10053302746103501No Hit
ATCAACGGGTTATATTCTGAAATTTTGTGATTTACTTATAAATCTTCAATGG1490.10053302746103501No Hit
CTTACTGGGTTAGCAACATTTGTCAATTGTCTTCACAATAGTCTTCAACAAG1490.10053302746103501No Hit
GGCTTGGGGTGCAATGTTTTACTCACAATTTGCACATTCACATTTTTTGGAC1490.10053302746103501No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)