FastQCFastQC Report
Sat 31 Dec 2022
SRR5847033.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847033.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145840
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC8880.6088864509051015No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT7450.5108337904552934No Hit
TTGCTTTGGGAGGGGCCAGGATCCAGTTCCCTCATCTCTGGCAGGAAAGATC2290.15702139330773449No Hit
TCTCAAGGGGAAAACTAAGGAGAGTCGTGAAGCAGTTGAGAAAGAATTTGAG2070.14193636862314868No Hit
TAGTTGGGGACGTGAAAAAATGCTCATTATCTCTGGCCGTCAGAGAAATGCA1880.12890839275918814No Hit
GTGGTTGGGACTATTGGCCAGTTCCGTTCAACGAAGTGGTTGCTTTTTTTAG1850.12685134393856282No Hit
GACAATGATAATTTTGTGTTGGATCCCTATTCTGGAGTCATAAAGTCAAATG1840.12616566099835436No Hit
TAGCTAGGGAGCTAAGTGATTATGTCAGTTTATTTAATTTTGTCTAAGAACT1800.12342292923752057No Hit
TACAAAGGGGGGGAAAAATCCTAAAGCTGTCTTCCAAAAGGAAAGGTAAAAT1800.12342292923752057No Hit
AGTGCGGGGAACTGACGGCAACATGTAAACACTCGAAAAGCAATGACACTAT1780.12205156335710367No Hit
TTTCATGGGAGTTACATTGGTTTTAGATTGTGGTTTCCACATCACTGTAATA1780.12205156335710367No Hit
TAAATAGGGGCAGCAATTCCTTATTCTTTAATCATATCCTTAGGGTATTTAG1730.11862314865606144No Hit
ATTGCTGGGCGATCTATGTGCGGGCTATTCTGATTTTTCGGTCACCCTGAAG1730.11862314865606144No Hit
TGCAAGGGGATAATCAGATGTGTTATAAGCCAAGTGCTAACACATAGAAGAC1720.11793746571585298No Hit
TAAGAAGGGAGCCAACTACGTAACCATGAATTAAAGCGTATACTATTTTCTT1720.11793746571585298No Hit
TCAAGTGGGCTGGAGTGGAATACAATAATCTAGTTGTATGCAATGATGCAAT1710.11725178277564455No Hit
CGATTTGGGGTTGGCCAGGCTGATCTTAAACTCCTGCAGGAAATCCACCTGC1700.1165660998354361No Hit
GCGCTCGGGACAGAAAGCACTGAAAAATGTTATTATTAATATTTTCGCCCTA1690.11588041689522764No Hit
GGCTATGGGCAGACTTCCCAATTTTAAATCTGGTTTCCCCCTGAATATGTGG1680.1151947339550192No Hit
AGTTTGGGCGATCTATTCGGGGGATGCTTATGTGGTTGTTCAGTTTGTTCCC1680.1151947339550192No Hit
TATCATAGGGACAAGAAGCAGAATTCTTTCAGCTCAAGGGACTGGCAGAGGA1670.11450905101481074No Hit
GTTTAAGGGGATAAGGCCCTAATGATGCTCTTTAATGATGGCACCTTTCAGG1660.11382336807460232No Hit
AGGCTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAACAGGGTCGTCTAC1660.11382336807460232No Hit
AGTAGGGGGGGCAGAAGGGAAACGTGAAGAAGGTGAAGATGGCGGTGGCCAG1660.11382336807460232No Hit
CAACCTGGGAGAGCCTTTATTCTGTAGCCAGACGACACGAGGAGTCTGTGTC1660.11382336807460232No Hit
CACAGTGGGGTCCGATCTATAGGAGGGCTATGAAAGTTTCTGTATAACAGGC1640.11245200219418541No Hit
TTGTCGGGGGAGCTGCCAGAATCCTCTCTAAGGCTTTCATAAATTATTAAGA1620.11108063631376851No Hit
GAAGCAGGGAGGGGCAGGGAAGGGGGTGGTGGAGCCCAGTGAGAGTTGGAGG1610.11039495337356008No Hit
GCTGAGGGGATGTGGATTTTTGAAAATAAATATATTGGAAATATTTTTTGAG1600.10970927043335163No Hit
CTACAGGGAAGATTATTTCATTTTAAATGCATAGGCTTCTCAAATTATATTT1590.10902358749314317No Hit
TTCAATGGGAAGTGATCTCCTAGCTTGTAAGCAAACTGAGATGCACTATCCC1590.10902358749314317No Hit
CTTGCAGGGGAACCATATGGGCAGTGTACAAAATATGAAACAACTGTTTCCA1590.10902358749314317No Hit
ATGCTGGGATGACTCCTTCAAGGAAAAGAGGCCCTGCTCCCTTTACCTGCTG1580.10833790455293472No Hit
AAACGCGGGCCCATTCACAATTACTACAAAGAGAATAAAATACCTAGAAATA1560.10696653867251783No Hit
GCCGTAGGGAATGAGGGATCTGAAGGAAACGGCCCCAGAGTCACCCATCCCC1560.10696653867251783No Hit
CGTAATGGGGTACCTGTGCCTAGGATTGGTTTTAAATTTGTAAATAATTTTC1550.10628085573230939No Hit
TGATTTGGGCAAAAACATTAAACAGAAGAAATCATTTTTTTGCTATGTAATA1550.10628085573230939No Hit
TGCGATGGGGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATCAGAGAG1550.10628085573230939No Hit
ATGTATGGGATAGTTGATTCGGATGAAGAAGATTCTTCAAATAATGCCGACG1550.10628085573230939No Hit
CCAGATTGAAGAGACAGGCAAATACAGAGAACAGGAGCAGAAGCCTCTGCAG1540.10559517279210093No Hit
ATACCCGGGACACCAGTGGAGGAGCACACCAACATGCACCAGCAAACGCCAG1540.10559517279210093No Hit
GTTACAGGGATGATTCTCAGGAAAATTCAAACTCTTTGTGCAAAGATTTGCC1530.10490948985189248No Hit
TTGAAGGGGGGAAGTTCAGGTATTTTGAGCCAGAAATACCAATACTCCACAG1530.10490948985189248No Hit
CTACTCGGGACGTTGGATACGAATAAAATAGTTGTATCATATTTAATGCATG1520.10422380691168404No Hit
CACACAGGGGGTGATGGAACTATAACAACAAAGGAATTGGGAACTGTAATGA1510.10353812397147558No Hit
TAGCTGGGGACCACGGTCCAGAGGGGCAGAACGGGCGGCGCTTGCCTTGCCC1510.10353812397147558No Hit
TGTAGCGGGCTGCATCAGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGA1510.10353812397147558No Hit
GGAATCAGGGATACTACAATATTAAGAAATGCCTTAGTACATAAGACTTGTA1510.10353812397147558No Hit
ACGCGTGGGGGCAGCCGGAACGCCTGAGCGCTGGGCGCCTGGTCTGCCGGAC1510.10353812397147558No Hit
TCGAATGGGCTCCATCTACATGAAAGAAAAGTTACCTAACAAGAAATTTGAG1510.10353812397147558No Hit
GTACTAGGGATAAAACTTAAAACTTTACAGTCAGAGGTTCAATTCCTCTTCT1500.10285244103126714No Hit
TACCTAGGGCACTTTCTTAGACCATGTCAACCCGATTCTGAATTTAGGGTTC1500.10285244103126714No Hit
GATTGTGGGGTTGGAATAGGATGTAAATAAGTGGAGGTGGGCATTGAAAGTT1500.10285244103126714No Hit
AAATCCGGGAAGACCTAATGATCTATTGCTTATAAGAAACACATTTCACCTG1490.1021667580910587No Hit
AGCTATGGGATTGAGTGGGAATGATTAATTGGATTTGCTGAAAATTATTTTC1490.1021667580910587No Hit
CTGGTCGGGAAGCCAGAACCTTACTAAAGTAGAGGGCACGATCAGTGTGAAT1470.1007953922106418No Hit
GTATCAGGGAGCCAGAGAAGAGGGTCAAAAGAACGATAAAATAGAAAACAAC1470.1007953922106418No Hit
ATTGTAGGGACCAGTCATATGATGACAAAAAAATAATAATTTGAAACTATTT1470.1007953922106418No Hit
AAACAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1470.1007953922106418No Hit
AACTAGGGGCCGATCTGGCCAGGGATATTAGCATGGCTATATTTGCTAGTAG1460.10010970927043335No Hit
GTATTCGGGCGATCTACATGCGGGATGGAAGATGGAAAAGGGAGATATGGAC1460.10010970927043335No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)