FastQCFastQC Report
Sat 31 Dec 2022
SRR5847026.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847026.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45598
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC4831.0592569849554805No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT4440.9737269178472739No Hit
GTAACAGGGTAAAGAGGCAATATCTAGTAGCTAAATAATAGCTAAAATTGTT1950.42765033554103254No Hit
ATTAACGGGAGAGAATGAGAGACATGTGGAGTAGACCTGATCTGACCTCTGT1860.407912627746831No Hit
CACGCCGGGATCCCTGCTACAGGCCCCAGTGTGTGTTGTTCCCCTCCCTTTG1550.33992718978902586No Hit
TTGCATGGGACAGACCAACTAGGCTACATCTGTGATGAGCAGCTAGCAAAGC1250.27413483047502085No Hit
AAGTGGGGGGAAATTCTGAAGTTTAGACCAAGTTGCCCATTTCTGCGTAATT1180.2587832799684197No Hit
GAAGCAGGGTGGAGGATAATGAAAAGTCCGTGTTTTGAAGTTTTCAGATTAT1090.23904557217421818No Hit
TGTCAAGGGCGGCGTTTGGGCTACGGTTGTTGTTGGCGACTGTGCTTCAAGC1050.23027325759901748No Hit
GCTGTAGGGGTGTTCATTTTTTACTACATTTTATTAAAACCTGCTTTATACT1030.22588710031141718No Hit
TTAGCAGGGTGAGATTTTTAACATGAAGGGATGTTGAATTTTATGGAAATCC1020.22369402166761698No Hit
TTACCAGGGGGTAAAAACAACTCAGAATACAAAATCTTTATAAAGGGAGGCC1020.22369402166761698No Hit
GTTAGTGGGAAGGAGCTGGTGGAGATTGCGGTGCCTGAGAACCTGGTGGGAG970.21272862844861615No Hit
CTGTAGGGATGGGAAAAGATTTGATAACACCAATCAACAGGAAGCTGGGGTG970.21272862844861615No Hit
CAAAACGGGGAATAATTAAAGATAAAGCACTTCTTCCCAAAGGGAATTATCA950.20834247116101584No Hit
GTTTAGGGGAGAGCACAGCTTGGTTTTATACATTTTAGGGAGACATGAGACA940.20614939251721565No Hit
ATTCCAGGGTTTGTCTAAGCACTGGCCAGTCTGTTGTGGGCATTGTTTTCTA940.20614939251721565No Hit
ACCTCACAGGCCCACCCCCTGCCGGGCATGCCGTGGGATCATGGGCAGGGAA910.19957015658581514No Hit
CTGTCAGGGACTGGAGTTTTTGGTGCTGAATAGAGCCAGTTGCTAAAAAATT900.197377077942015No Hit
CATTCTGGGGTATTGCAATGGTATGAATCTGCTCATGTGGAGACTGGCTATA890.19518399929821484No Hit
CTCTGTCGGGGATATACGGTATCAGAGACTGGTGGTGGAGCTGCTTATCAAA890.19518399929821484No Hit
TTAATGGGGAGCTTAAAACATTTTCTAATTTTCATTTTATTTCTCTTTTGAC880.19299092065441467No Hit
GTACCAGGGGCAACGTCTTAAAAACAGGCGTGGTGCGCTGCTGCGTGGGACA880.19299092065441467No Hit
GAACTTGGGCCAACAGGGAAATGGCAAATAGCCCAGTGTGCGTAGAGTTTAC860.18860476336681434No Hit
GTATATGGGATTCCACTTTAGGGAAATTCTCCTTTAAATGGGTCAGAAAATA850.18641168472301417No Hit
TCATTAGGGATGAAAGAAATCTTAGATAAGAAGGTTGAGAAGGTGACAATCT850.18641168472301417No Hit
AAATACGGGCGCTGATCTGGATGTGGGGTGCCAAAGTACCCTTGTGATTCAG840.184218606079214No Hit
TGCTATGGGTACATCTGCAATATTGTGTTTTTAACGCCAGCACCCAGAACTT830.18202552743541384No Hit
TGCTTTTGGGAAATTATTTCAACTAGAAAGCAAAAATAGGTGGCTTCGACAG820.17983244879161367No Hit
CGTAAAGGGATGAGAACAAGAATAGAGTCATCATGTATTCTTTGTTATTTGC810.1776393701478135No Hit
TCAACAGGGAAAGGGCTAGATTCTGGTAAATGGCATATATGAATGCACAGTT800.17544629150401334No Hit
GAATTTGGGTCGTGGCAGAGTTGACTGGAGACAACATTCCTAAGGACTTTAG800.17544629150401334No Hit
TGTAAAGGGATCTCATGGTGTGCGATGAGCAAACGCCTGATTATTCATTATA790.17325321286021317No Hit
TAACCAGGGTCCATGGTTGATGTTAAAGTGGATAAGATAAAAGGAGGAAAAT790.17325321286021317No Hit
TGTCTTGGGGCTTCTGGTACCTGATTTCCTGACATTGCTATTTATATGATGC790.17325321286021317No Hit
TGTCTGGGGATTGCATATTTTATGTATTTGGACCAAAAGGTTACAAGTAATT790.17325321286021317No Hit
CATGGTGGGCTGCAGAATTCCTCAGTGTTTGTTTATATGAAAGTTCATTGTG790.17325321286021317No Hit
ACCGCAGGGATGTGTGAAAAGGACGCAGACTGAAAACGTTTTGGTTTTGTAC780.171060134216413No Hit
ATAGCAGGGAGCACTTTTTCCTTCTGAAAATATTTACATTTTGCTAACCTAG780.171060134216413No Hit
TACTCAGGGGAAGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGC780.171060134216413No Hit
AGCATAGGGATTTTGGAAGCAGCTGCTGGTGGCTTGGGACATCAGTGGGGCC770.16886705557261283No Hit
GGCTATGGGTACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACT770.16886705557261283No Hit
GTTCTTGGGCTGGTTCCTGGAGGCATCAAAGGCTGCATCCGTTCTGCCAACA770.16886705557261283No Hit
CACAGCGGATTTTGTGCAGTGATTATTTTTTAAAGTCTTCTTTCATGTAAGT750.1644808982850125No Hit
AGAGTAGGGAGTTGCAGCTGATGCCTGAATGTATCCTAGCTGACAAATTATT750.1644808982850125No Hit
CACTCAGGGAGCCACAGAACTAATCATATTTTATATCTTCTTCGAAACCACA750.1644808982850125No Hit
GACTTGGGACATATTTCAGTATAGTAAAAAGAGGAAGTCTATCACTGTAGTG750.1644808982850125No Hit
ACTCACGGGGAGACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAG740.16228781964121233No Hit
AAAAGCGGGAGCCATCCCCTCCTCAGCAAGGCATCTACCGGCCCCTCACAGA740.16228781964121233No Hit
GTATCTGGGAGTGAAGCTGATGCCTAGGAACTTTTAAAGGGATCCTTTCAAA730.16009474099741217No Hit
GGGACTGGGATGCATGTGTCTCTGTGTATATGGCATATACCTAGTAAGTATG730.16009474099741217No Hit
ATACAGGGGGTGCCCTTGGAGGCAACCTCCCATTTTAGATGTTTAAAGGACC720.157901662353612No Hit
GGATATGGGAGTTTGATTTTTCTTTCCATATTTGAATTAATTTTTTCTGTTT720.157901662353612No Hit
ATGCATGGGATTGATGTGTTCCATGTCCAATTCATGAAAATAAACTGTTCTA710.15570858370981183No Hit
CCATCAAGGGTTCTTGATGGTGCCCTTTGAATAAGAAAAGTTTTACATTTTC710.15570858370981183No Hit
GTTCGCGGGTCCTTTTAAGAATATGGAGATGAAGATTGTTTTCTCCAATTTT710.15570858370981183No Hit
AGCCTGGGTTATTTGGAACTGGAAACATGTTTCCCCACGAAAGTTTTGTTAT700.15351550506601166No Hit
CTCTATGCGGGCAACAAAATATGTTTTTACTGGATAAAAACAAGTTTTGTTC690.1513224264222115No Hit
AAATTAGGGAATATATATGTACCTAATATTGGAACACCAAAATATGTAAATC690.1513224264222115No Hit
CATGCAGGGGACTATACAAATTGTAAAACAGATACTATAATATTTCCTTTAT690.1513224264222115No Hit
TATCGGGATCTTGATCTGTTTCCTCTATCTTGTTTCAGTGCACACGCTTGTG690.1513224264222115No Hit
TGTGCTGGGTAGTGAGGTGTGTGTATTTGTGTGTACACACATGAGATGGACA680.14912934777841133No Hit
GTAGCAGGGATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCT680.14912934777841133No Hit
TATTATGGGCATCACAAATCCAAGAATGTTTGCATCCTAAATGCTAGTTTGC670.14693626913461116No Hit
TTTGCAGGGACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAA670.14693626913461116No Hit
ATGATAGGGAAGTATACCAAACAGAAGTAAACATATTCACAAGAAGACAATC670.14693626913461116No Hit
GTTTTGGGGTGTGCATGAAATACTCTCTTTCCATAGCTAATTTACATTGTCT670.14693626913461116No Hit
CTCACCGGGCGCTCTTCCGATCTTCGATTGGGCCGATCTTGGTTAGGGATTT670.14693626913461116No Hit
TGACATGGGAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTG660.144743190490811No Hit
CATCTTGGGAAGTGTACAGTATTTACCTTCCTTTGTCTTACATTGGCTTTTT660.144743190490811No Hit
TGACGGGGACAGCAAGACGAGAAGACCCTATGGAGCTTTAATTTATTAATGC650.14255011184701083No Hit
GGGTAACGGGCAGTATACAAGAGTCAATTGATTTCCTCTAGACCAGCAATGA650.14255011184701083No Hit
GGTTTAGGGATATCCAAATTCAACTGTTTGGTTCACTCTTGGTGCCTCATAT650.14255011184701083No Hit
CCAGCGGATTAACATTGGAAAATAGACATAATCTTTAATTTTTAAAATATTT650.14255011184701083No Hit
TAATTAGGGATTTTTTAGACAGTTTGATTATTCTTAAAAATTGAAAACATAA640.14035703320321066No Hit
TTTCAGGGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGA640.14035703320321066No Hit
GTTTAGGGATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCC640.14035703320321066No Hit
GTCTGGGGGCAGGCCCCACTGACATTAAAAGAATACTAAAGGAATGTCACAA640.14035703320321066No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTTATACA630.1381639545594105No Hit
AGTTAAGGGCACGACGCTCTTCCACTCTACGGCTGGGATTGCCATGGTTGAG630.1381639545594105No Hit
CACCATGGGAAGGAAATAATGAAATTTGTGTATATATGAAATACTTAAAATA620.13597087591561033No Hit
CTAAATGGGATGGCCCTAAGCATGGAGAGTCAATATGTTTAACAAGCTAAAC620.13597087591561033No Hit
TAAGCAGGGGAAATTCACCATGAAAAAACAAGAATAACAAATAGAAGGGAAG610.13377779727181016No Hit
ATCAAAGGGTGTTCTGTGTCAGTTTCCTCTGCGCCACGTGCTTTCACAGTTT610.13377779727181016No Hit
TGTCAGGGGCAGTGGAAGTTGTAACTATCTGCCACACTATATAACAGGAGCA610.13377779727181016No Hit
TGCAATGGGACCCACCATATTCTTCCTTGAGGAATTACAGCATGTAATTCTA600.13158471862801No Hit
ATCGCCGGGTATATATTGTTGTTATCCTCATTAGATTAATAAGGAAACTGAG600.13158471862801No Hit
TACATGGGAGTCATGAACCACCACACCTGGCCTACATGATTTTTTTAAATCC600.13158471862801No Hit
TAGATAGGGAAGACGAGAAGACCCTATGGAGCTTTAATTTATTAATGCAAAC600.13158471862801No Hit
GTACTTGGGTACCAACAAGAAGGGAATGCAGGTAGTTGTTTAGGAGATGGTA590.12939163998420986No Hit
ACAGCTGGGGTATCTTTGCTGTAAAGTGCAAGGAAATTTTAAATTCTGGGAC590.12939163998420986No Hit
TAATATGGGGCAATAGGCTATAAGGAATAGCAGGAGAAATTTTACTGAAGTG590.12939163998420986No Hit
GACCTAGGGGTGGATGGCCCCTCCGGGAAACTGTGGCGTGATGGCCGCGGGG590.12939163998420986No Hit
TACTATGGGATAGGAGATTCTGCTTATTGATCGGCTTGTTGCCTGTCTGCTC590.12939163998420986No Hit
TTATGAGGGCATTCTGGATTATTGTTCCAGCATTGCACAGTCCCACTAAACC580.12719856134040966No Hit
GTATATGGGTCTATCAAGAGTGCTGAATTTCTGCATGTTGAAAGACTTAGTG580.12719856134040966No Hit
AGTGTTGGGGGTTTGATTAGATTTTTTAAAAAAATATGACTTCATCTGTGAT580.12719856134040966No Hit
TAATCGGGTGATCCAGCAGTTCTATGCCTATATACATGCCCAAAGTAATTGC580.12719856134040966No Hit
CAACATGGGAGTGCTCTGAGCCCTAGGATTCATCTTTCTTTTCACCGTAGGT580.12719856134040966No Hit
GCTCAAGGGGAATGGTGTTTACAGTGCTGCAAATTACACCAATGGGAGCTTT570.1250054826966095No Hit
TGGTGCGGGGGTGGCAGGGCCAAGGTCCCCACTTTCTTGCTGACTGTAAACT570.1250054826966095No Hit
GTGCTAGGGCTAATTAACTGTTGATGAGCATTTTGGATATTCTAGGAGAAAG570.1250054826966095No Hit
AACGATGGGATCTGTAGAGGTTTGTTGTTGTTGTTGTTGTTTTTGAGATGAA570.1250054826966095No Hit
AACCAAGGGATAAACAATGTTAAATAAAGGTAGACTCAGTCTTTAAGATATT570.1250054826966095No Hit
CCTAACGGGGGGGGGTGGCGCTGGGGACAACCAGAAAGTTTCAAGCGACAGG560.12281240405280934No Hit
GTTAGGGAAGCACTAATATTCAGGCCTTACATTATACCAATTAAATCAGAAT560.12281240405280934No Hit
GAATTAGGGGGTTTGCTGTGGAGGAAATAATGTACTAGATCATTGTCACAGA560.12281240405280934No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAA560.12281240405280934No Hit
GACTCCGGGCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTG560.12281240405280934No Hit
AATGCAGGGAATGATATGAAATGATGAAATGATAAAAAGTGAAATGATTAAA550.12061932540900916No Hit
ATGTATGGGGGGCAGAGGTGCACTTTATGAAACTGGCACTTGACTGAACAGA550.12061932540900916No Hit
TATCATGGGTCTATGGCCGGGGATCTAATGTGGGGATTATGAAATGTTTTAA550.12061932540900916No Hit
GCTGATGGGTGGCTTTTATAGTGACAGGCAAAGAGGAATTTATTGAGATCAC550.12061932540900916No Hit
TGAAAAGGGATGTAAAGATTGTATTACATTTGTATACAAAATTTTTTTGCAT550.12061932540900916No Hit
CATACACGGGACACGACGCTCTTTCGATCTAATAACGGGAACATTAAGCATG540.11842624676520899No Hit
GAGCTAGGGAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACC530.11623316812140884No Hit
CACAAAGGGTCCGATCTGCTATGGGGATTATTCAAGCTATGTAAAATATGCA530.11623316812140884No Hit
CTTGTAGGGATAGACAAGTGGGAAAAATGGTGTTAATACTTTCTAATATTTC530.11623316812140884No Hit
TTGTAGGGGAATTATGTCCATTTTGTTATAGACTAAATCAGGGGTTTGTTCT530.11623316812140884No Hit
TGCAATGGGGAAGGTCATAAATCTTTCAGAGTGACATCACCAACTGTACTGC530.11623316812140884No Hit
GGAAACGGGATGAGACATCTATGAGAAACTTTTGGAGCAGTGCACTCACTCA530.11623316812140884No Hit
ACACTAGGGATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTT530.11623316812140884No Hit
ACTCATGGGAAATGGGTTACCTCCAAATATGAAAATCTATAACAACCTATGG520.11404008947760867No Hit
TTTCGGGGGCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATACTACC520.11404008947760867No Hit
TATATGGGGATGTAGAATTTAAAGAATATGTTAAAAATTATTAATTTTAATA520.11404008947760867No Hit
CTAGCCGGGATGTGACAATTGTCAAAAAATGCACTAAAATGTAAATGGAGAT510.11184701083380849No Hit
GCACTGGGGAAGGAATCTTTCTTGAAGGAAATTTAAATACAGAATGAAACAT510.11184701083380849No Hit
CGAGCCGGATTGGTACTGTTTGGTATTTGCAAACAAAAATGTAGTTAATGTA510.11184701083380849No Hit
ATGTAAGGGGGGTACACACTGAGGCCTTGATGATAACATTGGAAATGATGTG510.11184701083380849No Hit
TAAGCTGGGGGCCACCATTGCTTCCAGTGAGAACCTCTCTATCCAGGAAAGA500.10965393219000832No Hit
GGATCTGGGTAAACAGTTGTTACAATGTATTGTCAAAGACAAGCTCTCCTTG500.10965393219000832No Hit
TAATAAGGGAGTGTAATTTCATTGCCTTTTAAAGGCTAGACATAGCTTTTGA500.10965393219000832No Hit
GTATATGGGACCAATGGATACATAAACTGGAGCCCTAGAAGGATGAAAAAAG490.10746085354620817No Hit
AATAGAGGGATATATAAACACTCCACAGTGTTTATATTGGGAAGATATTGGG490.10746085354620817No Hit
CCAACAACGTGAAGACGGCCGTGTGCGACATCCCGCCCCGCGGCCTGAAGAT480.105267774902408No Hit
TGTCCAGGGAGAATACTCCTTGGTCAATTGTAGGTATTCTTTTTGGTTTAAT480.105267774902408No Hit
ATTCTCGGGAATGAGATGAAAGAAAGCCTCGGTGTCAGGCATGTGGTAATTT480.105267774902408No Hit
ACTGTTGGGGAAACCGGTTAAGGGAGAAATTTTAAACATGGCAAACTTAAGA480.105267774902408No Hit
GTCATAGGGATACCAAAATTGAACAGTTTCTCGGGCTTATATGCCATCATGA480.105267774902408No Hit
TCACTTGGGATGACAAACACTATGTGTTGGTTCTCCCTTTAAAACACCACCT480.105267774902408No Hit
CGACATGGTATTCAGACTTCCGATGGGCTTATCTTGTCCCCTCCAGGTACAA480.105267774902408No Hit
ACAACGGGGTATGAAGCTTAGCACAGCTCTAGTTACATTCTTATGATATGGC480.105267774902408No Hit
ATTAAGGGGCAGGCACCGCCTCCAGGACAACGTGCGCGAGGACCTCTATGAG480.105267774902408No Hit
TACGGTAGGGGGGCTCGGGGACGCGCTTCCTGGTGCTGGGCCCTGGCGCTGC480.105267774902408No Hit
GAAACAGGGGGTTTTTGTCTGAGGGTGCTCTGTAATCCTCCTGCTACTTGGT480.105267774902408No Hit
TTCAATGGGAAGACTGAAGGTTTTTTTCCCTTGACATTATAATCTACCAGAA470.10307469625860782No Hit
GATTTAGGGATCTGGTAGCAAGAGGGGCTGTTAGAGATGGAATATCTTTTCT470.10307469625860782No Hit
GTCACCGGGTAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGATCAGCCC470.10307469625860782No Hit
CAGCTCGGGAATAATAAACAATGTAGTTCCCTAGCATCATTTGATTAAAAGG470.10307469625860782No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTT470.10307469625860782No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAA470.10307469625860782No Hit
CTTTTAGAGGGGACCATATCGATTATAAATGTCTCTCTGTAAATTATAACTT470.10307469625860782No Hit
GCATTCGGGCACCATGGCTAGTTTTTCCTCTGAAGATTGTTCGCCTCAAGGC470.10307469625860782No Hit
GGGCATGGGTATTTACTCAAAACATATGCCAAATTTAGTGTTGAAAGGCTCA460.10088161761480767No Hit
AGTTAAGGGCCTGGAGACCGCGGCCAAGCACGAGCTGGAGCTGATGGAACTC460.10088161761480767No Hit
AACTCAGGGCCGCCACGCAGTTTTATCCGGTAAAGCGAATGATTAGAGGTCT460.10088161761480767No Hit
GAATAGGGGCGATCTCAATGCGGGCTTCACTGATGCTTGTCTGGTAATAATC460.10088161761480767No Hit
CACGCTGGGCTGTATCTAAAGAATAGATTAAAACATAGGTTACTATTTATTA460.10088161761480767No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)