FastQCFastQC Report
Sat 31 Dec 2022
SRR5847019.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847019.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84192
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT8621.023850247054352No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC7510.8920087419232231No Hit
AGAGAGGGTGGGTCTCTGAGTCTGAGAAGGGATACCGCAGCATTCACGTCGC2090.24824211326491827No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTTATACA1660.19716837704294946No Hit
TAACCGGGATCTGAGATTGTTCTAGAAACTGATGAGGAAAGAGTCGTACTAA1590.18885404789053592No Hit
AACGGCGGTTCTGATCGGGGCCACGGTGATCGGCCTGATGAACCGGTTCGCC1530.18172748004561004No Hit
AATGGCGGGAGTTGCAGGTAATTTTTTGTCTGCTAGTAGTGTTCTAGATTAT1460.1734131508931965No Hit
AGGTTAGGGGCACTCGCGCAGACCTAGCGCGTCCAGGTGGGAGGTTAGTGTG1450.17222538958570885No Hit
TGTTCAGGGAATTCTGTGGGCGTGTACTGCTGTGATAAGATGTTTGTTCTCT1440.17103762827822122No Hit
GGGCGGGGAAGTTGCTGGATAATACATGCACTATGATCCTATTTCTGTAAAA1380.16391106043329534No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTT1380.16391106043329534No Hit
GCAAGGGGAAAGACAGAGATGGGAAAACAAAGCAGGTATCTAGTGGATTAGA1360.16153553781832003No Hit
TAACTTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1360.16153553781832003No Hit
GCATATGGGATTCATAGTAAATGCCGTATACAGATGTATCATCTTTAATCTT1360.16153553781832003No Hit
CTTAACGGGATTGAATGAATAAAGAATATGTGGTATATATACACAATGAAAT1320.15678449258836943No Hit
TTCGTTGGGAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTC1310.1555967312808818No Hit
TAATGTGGGTGTGCTCGGGAGGCGTGAGCCACCGCACCCGGCCATGTATACT1310.1555967312808818No Hit
GTATGCGGGAACCTCTGCCTCCTGGGTTCAAGTGATTCTTCTGCTGAGGCAG1310.1555967312808818No Hit
GGATGGGAAGAGTAAAGTAGACACTAATAAAGCACACCCTGACAATAAGGCA1300.15440896997339415No Hit
ATTCACGGGATATTAAGACAGTGTACAAAACTGTAAATAAAATGTGTACAGT1280.15203344735841884No Hit
ACTATTGGCTACCGAGGGGAATATAAAATTGTTTAATCACTTCCTGCATGTT1280.15203344735841884No Hit
CTGTCGGGGAAAAAATCTAGATGTAATCAAGAGCTGGATTTGTCTTCTGATG1270.1508456860509312No Hit
ATCAAGGGGATACAAGAGCAAAATTCAAGTAATACAAATATTTAACATTTTG1260.14965792474344355No Hit
AACTGGCGGGACCCACTTAAATGCTTAGCTTTTCTTGTAATTTCATCAAGAA1260.14965792474344355No Hit
ACGGGTGGGAGAGATGGGGTTCTCTTGCTGTCTCTCTGGCTGATTCCACGCA1250.14847016343595593No Hit
ACGCTCGGGAACTCTTTTAATTTATATACAAAGCAAAGAACAACATTAATGG1250.14847016343595593No Hit
ATTGCAGGGATTTTTGATGATGTTAGCAGCTGTTGATGCTCAGTGACTAGAT1240.14728240212846824No Hit
ACAAACGGGACACGACGCTCTCCGATCTAGCTCGGGATTCTAAGGATATGCT1240.14728240212846824No Hit
ATTGAAGGGAACAAATAGAAAGAAGAAAGCCTGTAATCTGTTTCAGAATGCT1230.14609464082098061No Hit
TTCAGTGGGTCGCTTTCATGCATGGAGGAGGGGAATCTACGCAAAGAAAGGC1230.14609464082098061No Hit
ACAGAAGGGACAGAAAACCACTGATAGTATTTGTTGCCAATGATAAAATTTA1220.14490687951349296No Hit
GGTTACGGGATTTTATTTGAATATAAGTTTAAGGAGTGAGAATGGAGAGTTG1190.14134359559103005No Hit
GAGCACGGGAAGACCATCTTATTCATTTTAATAGTTAATTATTGAGTTAATT1190.14134359559103005No Hit
TACTGTGGGACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTT1180.14015583428354236No Hit
ATAACTGGGAAACTTTAGTTTTGTCAAATTTTTTTCTATTGCTTTTTTGGTC1180.14015583428354236No Hit
AACAGTGGGATGGCCAGCAATCCTGTTCCCCCTCAGCATCCTGATTTAATTT1180.14015583428354236No Hit
TCAAACGGGAGCTGCTCTGCAAGGTTGAGGGGCCATCACAGGGCGCCTGGCT1180.14015583428354236No Hit
GCTTAAGGGATATTACAGTATGTTAAACATATGTTTTCTCCAAGCACCACCA1180.14015583428354236No Hit
TTTCTGGGAGTGATAAGGAAGGAAAAAGGTAAAAATACAGTATACTTCACGA1170.13896807297605474No Hit
TCGTCCAGGGAGGCCCCAAGTTATTTTTTAGCAATCTTACGAGTGAAATGTT1170.13896807297605474No Hit
ATTACGGGAAGAAATGAAGATATGCATTTCCAGTTCCAGAGAGAAATTCACA1170.13896807297605474No Hit
CTCAAGAAGGGAGAACATGACTTTTAAAAATGGAAGGGATTAAAAATCCTTT1130.13421702774610414No Hit
ATCTTAGGGACTAAAAATTTGTTCCTTTTTCACTATGGGCAGTTCACACAAG1130.13421702774610414No Hit
ATACTAGGGACGCCCCAAATAGCTTCCGTTTGGGCCCTTACATTCACAGATA1130.13421702774610414No Hit
GTAACTGGGGATCTGCTACGGGGATGCAAGAACTTATCTATAAACACATACA1130.13421702774610414No Hit
TTTGGCGGGATGGCTTTATTTGTTTTTTTTGTTTTGTTTTGGTTTTTTTTTT1120.13302926643861648No Hit
AATCGGGGGATCAGTGGAGTGGAAGGTGACTTGCTTGGCCCTTGTTCTTTTT1120.13302926643861648No Hit
TTGTACGGGGCTGCCGGGAGCTTTACCCAGCGTCCTGTGAGCCTCAAAACCA1110.13184150513112886No Hit
AGTAATGGGCATGTGTTCTCATGTCTTTTTGCAGATTTAAAGGTTTTATTGT1100.1306537438236412No Hit
TTCATAGGGACTTTCAGTCAATATGTGTCTTTACAGGTAATGTGAGTTTCTT1100.1306537438236412No Hit
AACGTCCGGGATTAGTATCAAAGATGTTATGGTAATTCAATATGTACAGTTT1090.12946598251615354No Hit
GTTGTTGGGATCCCATTGTCAATACATTTTTTAAACATGTTTTAAAATTGAG1080.12827822120866592No Hit
TCTTGCGGGGATATTTCAGATGGGCTTTTGATGCACTGTTGCCAAGGAAGGC1080.12827822120866592No Hit
GTAATTGGGAGGGAAAGACTGATGAAAAGTAAAATGGACTACTTTTGTAACT1070.12709045990117826No Hit
GTTGACGGGACTCACTCGTGTCTCGCTACCAGCTCCCCGCTGCCCTGCGCTC1070.12709045990117826No Hit
CTATGAGGGATCCAGCTGGGCCGGAAGCTTATCACAAAATACAATCGCCGGG1060.1259026985936906No Hit
GGTCTGGGAGTTTGAAAAGCCTAATATTTATTTGTATGTCAATATTTTTCAT1050.12471493728620296No Hit
GTGTAAGGGAAGGATGTTTTTCTTTATTTTTGTTAATATTAAAAAGTCTGTA1050.12471493728620296No Hit
AAATAAGGGGAAAGTATCTTGGTCTAGTGCAGTATTCTGATTTTCTCTTTTT1050.12471493728620296No Hit
GATTAGGGATTTGTGGCTTGAACTTGCCAGACGCAAATACCACAGACTCCAA1040.12352717597871532No Hit
TGCAAAGGGAGAGGCTGCCCCGGAGGATGCCGCAAGCTCCCCCTAGCCTCTG1040.12352717597871532No Hit
TACGCTGGGATTTGAAATAAGTTATGGCTTAAAATGCTTTTGGAGTTTATTT1040.12352717597871532No Hit
GTACTGGGGAACATTTAGCTGTATGATTTTGTCCTCGTTGTTGCCTAAAACG1040.12352717597871532No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAACTGTCTCTTATACAC1040.12352717597871532No Hit
CTGCTGGGGATAGAAAAGATTTTATTTTAAAATGAGTTGTAAAGCTTGTGTT1030.12233941467122766No Hit
CGTTTTGGGATGCCTCCTCTGGCTTCCTCATGTAAAGCAGTAGTAGTTCATT1030.12233941467122766No Hit
TTTCAGGGGGCTCCCAGTGTTTCCATTTCATGTTTTAATTCTCATTTTAAAA1030.12233941467122766No Hit
TTTATTGGGAACATATACTTGGCAATAAGTCACAAAAACATTCGTATTTTTT1020.12115165336374002No Hit
TCGACAGGGATGGGCAGGTTGAAGGTTAGGTAACACTGACTGGAGGACCGAA1020.12115165336374002No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCCTGTCTCTTATAC1020.12115165336374002No Hit
GATCGGGAAGATTTGGAAGCAACCTAAGTGTCCATCAGTAGATAAATGGATC1020.12115165336374002No Hit
GTAAGCGGGAGAGCCCTTCCCATCACTGACAGTGTCGGGTTGAGAGCCACCC1020.12115165336374002No Hit
TACGCAGGGACCGAAGGGCATCTTATAAGGGAGGTGGGGGAGGCGGGGTCAT1020.12115165336374002No Hit
GAAGTGGGGCAGACCCTGCTCGCCGCTCCATATGACGGCGGCATCGACAGCG1010.11996389205625238No Hit
AAATGAGGGAAAGTTTGCCAAGAGAAGTATTAAAATGCACTGTATATTTTAT1010.11996389205625238No Hit
AATGCAGGGAAGTTATGGGCAAGTCACTGAACCATGGGCCATCAGTTTCATT1010.11996389205625238No Hit
TAGGCCGGATGTGTTATCTGATATTGTCTACCTTTTCTGCTATTGGTGCCGC1010.11996389205625238No Hit
TTTAGCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1010.11996389205625238No Hit
AAGTCAGGGGACGCTCTTCCGATCTGTTTATGGGATTTCAATTGTACTTTTT1000.11877613074876472No Hit
CATTCTGGGGTTCCATTGGTCTATGCTTCTATTTTTGTACCAGTACATTGTT1000.11877613074876472No Hit
GTCGAGGGATGTACTGAGCACCTACTAAATACCCAAAATTATGCTAGAGTGG1000.11877613074876472No Hit
GTTAAAGGGACCAGTAATAGTTGCATTGATACTGCTGGCACCAGTTAATTCT990.11758836944127707No Hit
CTGGCATGGGAAATTCCATAATGTGCCTTATCTTTTCATTGCAGGATGACAG990.11758836944127707No Hit
TTGCTAAGGGATTTGAAAAAGAGCTCAATATCACTCATCATAAGAGAAATGC990.11758836944127707No Hit
TCGCGGGAGTGTTTGGTTTGGAAACCATCGCATATTAAATTATTCAGCAACT990.11758836944127707No Hit
AGTTCGGGACTTCTAAATGGAAGGGAAAAAGTTACCCACACAAGTTAGAAAA970.11521284682630178No Hit
TTAATGGGGCTAGGAGTTTGAGGCCAGCCTGGACAACAATGTGAGATTGTGG970.11521284682630178No Hit
AAAAGTGGGACAGCTGAGCAGTGTTTCGGCGATGGCTTGAACTGGGCTGGTT950.1128373242113265No Hit
TCTCAAGGGGACTGTAAGTCTGAACTACAGAGCCATGGTGCTTAACTGATAA950.1128373242113265No Hit
CTTCATGGGGGAGGCGAGGACTAGATTATTCTCTTTAGTTCCCCCAAATTTT950.1128373242113265No Hit
TATATAGGGTGGCATAAATCTAAGAAGAAGGCCTTTACCAAGTACTGCAAGA940.11164956290383886No Hit
AGATCAGGGAAGAGACCTACTGTCCGAAAACATTGTTACATACATTATTTTT940.11164956290383886No Hit
AAGCTGGGGATAACTTGTGTGATTTCAAATTAAACTTGCATTATGTGTTAAT940.11164956290383886No Hit
ATTAAAGGGAGGAACTTATGTGTGGGCTACATAAAATTTGGTGTTGAGGGAG940.11164956290383886No Hit
ACACAGGGCGATCTATATGCGGGATAGGAATCCTTGTGATTTTTTGCACATT940.11164956290383886No Hit
ATGCCTGGGGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGAAATATA940.11164956290383886No Hit
AATATAGGGATGACACACTAGGGAGTTGTGGCAGGCCTGAGAGTCTCCTCAG930.11046180159635119No Hit
TCACTGCGGGACCAGCAGCCAATCAGATAACTCCAGTCGTGTTTATACTTCT930.11046180159635119No Hit
AGTCTCGGGATTATAATCAATTTGCAAAGAAAATTGCTGAACCCTTGTTTTT930.11046180159635119No Hit
TTGGTAGGGATTTAGATTTTGTGGTGGCTAATTTAAACCATGTAAAATAAAA930.11046180159635119No Hit
TATAGCGGGATTTGCGAATGGTTCCATTCTCTCTCCTGTACTTTTTCCAGAC930.11046180159635119No Hit
GTGCCTGGGAGGTCATTTTCATAGCCTGTTTATTTTGTAGGTCTAATTTAGT930.11046180159635119No Hit
TGGTCAGGGATTTGACGCTACTGTAAAACTCCTTGGCCACAAATTTGGAAAG930.11046180159635119No Hit
TTAATTGGGAGCTGTAAAAATGAACTTTTAAAACTCCCACCAGCTTTTAACA930.11046180159635119No Hit
TGACACGGGACTGCAAAAACATGCCAAATTGTAAAGACCATCAATGCTAGGA930.11046180159635119No Hit
TTCTATGGGAGATAAAATGATATGAAATGATGAGATGAATGATGAGATGAAA920.10927404028886355No Hit
GCAGTTGGGACTCTTACTAACAATTTTTATACAGAAAATGAGTCATTTTGGA920.10927404028886355No Hit
GTGCGAGGGAGAATTGTTAATACCTTTACCCTTCTCTTGAACACATCAAAGG920.10927404028886355No Hit
ATATCAGGGAATCAGCATGCTCCTAGTGAAAAAAAGAGGAGATATAATAACA920.10927404028886355No Hit
GAAACTGGGATATAGGCAAATTTTCTCTTTACATGAAATGCTTACCTATATT910.1080862789813759No Hit
AAAGTCGGGACTGGATATCAAAGATTATTTGGAAAAGAAAAATAAAATCTCT910.1080862789813759No Hit
CAACATAGGGAAATATGCATTTCTAACCTTAATCGGTATGGTTTCCATTTTT900.10689851767388826No Hit
TTGCAGGGGAACCTTTTTTGTTTTACCTTTTTTCCAAATAACAGTTGGGAGA900.10689851767388826No Hit
GTTTGAGGGGGACCTGATAGATATTTATAGACCTCTCCACCCAAATACAACA900.10689851767388826No Hit
TCGCAAGGGGTACAATGTGAGTTTGCCAAATTTTCTTCATCTGCTACAGATT900.10689851767388826No Hit
ATATAAGGGACTATGGGCAGTTCACACAAGGCAAAAACTATTGAACAGTTGG900.10689851767388826No Hit
GAGTACGGGATCCACTTTCTGTATCTATAGATTTGTATATTCTGGACATTTT890.10571075636640062No Hit
CATACAGGGATAGACTTTGATTTTAGCATCCTGTCTTCCATTAAGTTTCCCT890.10571075636640062No Hit
ATTGATGGGCAAGAGAGAAGATTCCAATTCTAAAAGTATTCGATGCAGAATA890.10571075636640062No Hit
CAATGAGGATTATTTGTGAGCTTTAATAGGCCAGTGAGTCTTGAAGAGAATA890.10571075636640062No Hit
ATGGTGGGACTTTGACTCTTGAATGTGTCACTTTACTGGCAAGAGACTTCCT890.10571075636640062No Hit
AGTCTTGGGAACAAAATTGAAATATGTAAAATTTGAATATTTTACAAAATAT880.10452299505891297No Hit
ACAACAGGGGATCTACGGTTGGATTGGTACTTCTGGTTGGGGCTCTCTTTAC880.10452299505891297No Hit
AAAGATGGGAGTACTGTACTAGGAGTTATTATTCAGATTTATTTACCCACAA880.10452299505891297No Hit
ATTAACGGGAAAAGCACTATGGCAGATTAACACTTTCTCAGACCTTGTAATT870.10333523375142531No Hit
GCCAGCGGGTCCTGATGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAA870.10333523375142531No Hit
ACCTGGGGGGAGCTTCCTGTCCGGTGTTAGAAAGTAACTAGTTAAAAGTTCA870.10333523375142531No Hit
AGTCATGGGCAGGTAACTGAAGATTTTGTGTCTCCAGAACATCTTGTAGAGT870.10333523375142531No Hit
ATAATAGGGAAGGACAGTTTAACATTACAAATGCTATAAATACTTCATAATT870.10333523375142531No Hit
TGCTCCGGGATAAGGCTCATGATATAGGAAAAGGAATATAGGGCTAAAAATA870.10333523375142531No Hit
GATATAGGGAAGCTTTAGAGATCAAAGAATGATTTAGGTGAATTACTTGATA870.10333523375142531No Hit
ACTGCGGGGACTCCAAACCCTGTGCTCCTAGCCCCAGTGTTGTTCTTTCTAA860.10214747244393767No Hit
GCTGCAGGAAGAACTGTCCATTAAGCCTAATGGAATACCAAACTGTCTTCTG860.10214747244393767No Hit
ATTTCTGGGAATAAAAGGTATAGGTATTTATATATTAATATTTAAGTCATAT860.10214747244393767No Hit
TTCAATGGGCAGATGCCATCTTCTGGCTTCCTCAAGGAGCCAGTTAAAAAAC860.10214747244393767No Hit
AGTTTTGGGAGAGATGATTTAAAAAGTTCAAACAGACATGGTCATAAAAGGA860.10214747244393767No Hit
AAGTCCGGGAGTTGGGCCCTGTACCATCCCAAGTCCTTTGTAGCTCCTCTTG860.10214747244393767No Hit
TATCAGGGAGAGACTTATTCAAAAGATCATAGAACACTCTCCCCTATGTCTT850.10095971113645003No Hit
TAAAGCTGGGAGCATAAGCCAATTTCCATTAAAAATTATATATATATACACA850.10095971113645003No Hit
AACACTGGGAACTTCCAGTTGGTTATATGGAAGATATGTAAGATAAAACTGA850.10095971113645003No Hit
ACGCAGGGGACATCAAAGAAAGAAAAATATAAGCCAATACCCCTGATAAACA850.10095971113645003No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)