FastQCFastQC Report
Sat 31 Dec 2022
SRR5847010.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847010.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185358
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT6920.3733316069443995No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC5830.3145264838852383No Hit
TAACGGGGTCACCCAGACATCCTACTCATTATTCTCTTTTATCCATTTCAAA2590.13972960433323622No Hit
CTTTGCGGGGGGAAAGAGAGTGGCAGAAAAACTTTGAGGAAAGTCGAGATGG2560.13811111470775472No Hit
ATTTTAGGGAATTTCTTGTATTTCTATATACAAATAACAACCTAGATGAAAA2420.1305581631221744No Hit
TATCACGGGATGAATGCATATCCTATTTCCAGGCAGGCTCTCTTACTTGAAC2410.13001866658034722No Hit
TAGACACGGGACTCAACCTGTATTTTTCTTTTATACTTGAATTCTTCAAAAT2410.13001866658034722No Hit
GATTACGGGGTCAGGGAGAACCTCAAAGTGTGGATCTATCCCGAGGGTACTC2390.12893967349669289No Hit
ATGCATGGGGTAAAGACATAGGGATAGGTGGGAGAGGTCCATTCTTTCATAA2390.12893967349669289No Hit
GAATGTGGGATTTTCTTAATGAAACAAAAGGGAAAATCAGCCCAATAATAAT2380.12840017695486572No Hit
TCTGTGGGGACTTTCAGCAAAGAAATTTATTTTGAGAATATGAATATTTCAG2360.12732118387121139No Hit
AATCTAGGGATCTCAAAAAAAGAAAGAGGAAAAGATATACATAGAAACAACA2320.12516319770390272No Hit
CGTTCTGGGAGAACCTGTGATGTGGGCAATGGGGAGAATGAATGTGACTTTT2310.12462370116207555No Hit
TGTACTGGGGTGAACTGTCAAAGAACTCTGATATCGAACAGTCTTCAGATAG2310.12462370116207555No Hit
CACCATGGGAGTTTAACTAATGTGGGGCTGGCCACGTGGAAGACAGTTATTA2290.12354470807842122No Hit
CTTCATGGGATTGCTTACACTTTTGAGGTCTTAGTCATAAATAATTTGCCTA2280.12300521153659405No Hit
CACAGCGGGGCAATCAGCTAGAGCAATGTAGGCTTTTTTTAATTTAAATTAT2270.12246571499476687No Hit
AAGACAGGGACAAATCTCCTTAATTATAACATTCACAGCCACAGAACTAATC2260.12192621845293972No Hit
AAATACGGGACATCCATCCAGCGGAATACCATTTCCCTCAAACCAGCAAATA2250.12138672191111255No Hit
CGTAGTGGGGGTTGGTTAAGGAGTTGTTTAGAAAGGCAAAGATGTTTAGAGT2240.12084722536928538No Hit
TCAGTTGGGCGATCTCGAAATGGGAATCTGAATAGTTATTTTACTTTTCATG2230.12030772882745823No Hit
CAGCTCTCCCACCACTTTTCTCTATTGCATTTGCTCTCAAACTAGGGAGATT2230.12030772882745823No Hit
TCTACTGGGCATTTTTTAAGGTTGGGTCTTTCAGGCTGGTTTTGGTTTGTAT2230.12030772882745823No Hit
TTCATAGGGTATTTTAGCAGTTGATGTATTTTGCCTTCACAGTACATTTCTA2230.12030772882745823No Hit
AAATGCGGGGAAAAAACCACAAGCTCACTTGCCTGTGCATACAGAAAAACAG2210.11922873574380388No Hit
ATTGCCGGGGAAAACAGAATCAACAGAATGTATTCCTGAACAAGACCTGAGG2200.1186892392019767No Hit
TTTGGAGGGGGGTGTAGTGTTCTATAAATATTCATTAAGTTACTTAGCTTGT2190.11814974266014955No Hit
CATTCCGGGGAATTGTCCTATAATAAATCACTTATTTACAACCAATCAAACT2160.11653125303466806No Hit
CTTTTGAGGGGGTTAAATGTTTACTCAAATGTAGTAATAGTATGAGGCCAAA2150.11599175649284088No Hit
ATTAACGGGATTTCAGGTGGATTCTTTTGTATGATGACTTATAAAAGCTGAT2140.11545225995101371No Hit
GTCTTTGGGAGCCTAGTCCTCTCCTCCTCACCACCTCCTCAGCCACCAGCCT2140.11545225995101371No Hit
CTTTAGCGGGCGGCGGCGCACCTCGTGGCGAGAATCGGGAGAAGGAGGAGAC2110.11383377032553221No Hit
TTACACGGGGTTTTATGTTACAAAACAGGTTATTTCACTATATGTATGTTTA2110.11383377032553221No Hit
TGCTTTGGGCCTTGATGATTTTTTTTATCACTGGTTACTATCTTCTTAAAAA2110.11383377032553221No Hit
CCTTCAGGGGTATAGGTCATTTTGAGTTGTTGTGGGATAGTCATTTATAGTT2100.11329427378370505No Hit
ATACAAGGGATAATTTATTATGGTATTAAGTTCAATAGTGATTGGTTAAATA2090.11275477724187787No Hit
GGGGTGGGGAGGAAGTTTAAACTTAAGTTTTCCTTAAGGGTCAGCCCAACAA2080.11221528070005071No Hit
GGACTGCGGGAGAAGGGAAGGAAAAATGTAAGGTTTAACAGTAAGCACTTGC2080.11221528070005071No Hit
TAAAAAGGATAGAAGGATACATATACACAAATGTTTGTAGAACATTGCTCAT2070.11167578415822355No Hit
TTAATTGGGATAGGGACTTGTCTTTTTTTCTTTTTACATACAGCTTTTCCTA2050.11059679107456923No Hit
GAACGTGGGAAGCGAAGAGAGAGAACTTGAATTCACTGGCTTCTGTAACCGA2040.11005729453274204No Hit
TTATATGGGAACCACCACCAAGCAACTATTTTGCCATCTTAACATACATCTC2040.11005729453274204No Hit
TATTATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA2030.10951779799091488No Hit
TGAGCCGGTCAGGAAAAAAATAAAAATATCCCAGGGGAGCTGTGATTATGCC2030.10951779799091488No Hit
CGATTTGGGGACGCTCTTCCGATCTCACTGCGGGATAGATTTTAGCAACTTT2010.10843880490726054No Hit
CTAGGAGAGGGAATCCTTTCAGTGAAATACAGTCATGCTCTGCATAACGATG2010.10843880490726054No Hit
CTCACTGGGGTTAGCTTCATTCTATAACAGATTTTCTCAGTGTGGTGGAGAA2000.10789930836543338No Hit
TTTGATGGGGTTTGAACTTCTGTAGCCTAACTAATGCTTTGCTACTTGATCC2000.10789930836543338No Hit
AGCGTGGGGACGCTAACGTAGATAAACACCTTAATAATCTCAGTTAATACTG1980.10682031528177906No Hit
TCTTAAGGGGAAATCCTAAATGATATATGGCATCATAAATAAAATATTATAC1980.10682031528177906No Hit
ACACATGGGGGCCATTTTTGATCCCAGAACAGTTTCTCATAGATTAGAAATA1960.10574132219812471No Hit
TCAAGTGGGCATAAAAGATCTCAACATATAAATATTGCTTTTAGCCTGTGAT1960.10574132219812471No Hit
TTATAAGGGGATCTCGATATTTCAGATGGGCTTTTGATGCACTGTTGCCAAG1960.10574132219812471No Hit
AAGTTGGGGATAACTTCTGTTATTTCAGTAATAATAATTAACCCCAAAATTC1950.10520182565629753No Hit
TGCAGTGGGGTATAGATTCATGTTTTTCTGTTTTAAAAAGTTGAGCTAATAC1950.10520182565629753No Hit
AATGTGGGGATGGAAAGGTTGGACAATGTGCATGAACAGATAGGGGGGAATT1950.10520182565629753No Hit
TGCACAAGGGCCCCAAATTTAATATATCCAGAAACAGACTTCCTTTGCCATC1940.10466232911447038No Hit
GAAGTAGGGATTTGATCAGAATTTAGTTCTAAGTAGCCATTTTCCTTGCTAT1930.10412283257264321No Hit
TATGATGGGAGAGCATTTGTGTAGACCTTGTAGAATTTTTCTCTCTGGTCCA1930.10412283257264321No Hit
TACGACGGGGACTGCATAATTTTCTTGAAGACGTGTAACAGATCTGTGGCTG1930.10412283257264321No Hit
TAGCCGGGACAGATTAAAACATTATTTATCACATTGTTACTTTGTCAGACTT1930.10412283257264321No Hit
TAGGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1930.10412283257264321No Hit
ATTGCTGGGGGGTAAGGTTAGGTTACTGATGTGAGATTTTTTTCTTCCTTTT1930.10412283257264321No Hit
GTTTATGGGAAGGACACAAGAAACATGAAAAGGAAACATACCTCTAATGGAA1920.10358333603081604No Hit
GGTTACGGGTATGTTCCAGATGTTCTATTTTGGTCTGTGATCCTGTTCTTTT1920.10358333603081604No Hit
AGTATGGGGATATACGATGTGGGAGAGCAGATTGCTGTTCCCCGCAATGATG1910.10304383948898889No Hit
TTGCTAGGGTGATTGAATAAATAAATATAAACATATGGAGAAAGAGACAAAT1910.10304383948898889No Hit
AGAACAGGGGATCTGAATAGGGTTTGTCTTCAGTTAATATAATTGCAATATT1900.10250434294716171No Hit
TGCAATGGGATAGGAATTTTGTTTTTGGTTTCTTTATCATGCTACAGAGAGT1900.10250434294716171No Hit
TAAGAATGGGAGTGACAGCTGATATTTGTTTTGAAAGTGAATCTCATAATAT1900.10250434294716171No Hit
ACAGCAGGGAGTGGAAAAGACCATTTTTATTCAATCTGGGAAGTGTTGTCAG1900.10250434294716171No Hit
ATGTCGGGATTGTTACAGAAATGGCATTGGAACCAACATGGCACTGTGAAAA1900.10250434294716171No Hit
TTATATGGGGAAAAACAAAGAAATTAACACATTTAAAAAATGAATGATAGCA1890.10196484640533454No Hit
TTGTAAGGGTGAAGTAGGCATATGAAAGAAAAGGCACTTCTTGGACAAGCAC1890.10196484640533454No Hit
ATCAAAGGGGCGCTGCTCCGGGAGCCGCTGTGGCAGCGTATGCTGCCACGGG1880.10142534986350736No Hit
CTCCAGGGGACAGTCACCTAAGTCACTGAACACAAATGTGATCAGATTATTC1880.10142534986350736No Hit
ATAATAGGGAGTCTGTGTTATAAACAGATAATTCTGCCAGTCACTCACTCAA1880.10142534986350736No Hit
AGTTTAGGGGAGTCTATAGATCAGAATGAATGGGGCCTAAAGTTTTAAAAAC1870.10088585332168022No Hit
AAGTTGGGGATCATTTTGTTGCGCTTCTGAATTCTTGTTACCCATATCACTA1860.10034635677985304No Hit
ACAAAATGGGAGCAGAAGTGGCACAATTGGGGGAAGAAAATGGCTTTTTCTC1860.10034635677985304No Hit
AATTTCGGGGTCAGGTAACTTGCCAAACTAAAAAGTATGTTAGTTGAGGCAA1860.10034635677985304No Hit
CGTAACGGGAAGGTTTTATCCAGACATGTGTGTTCTTTCAGAAAATGACATT1860.10034635677985304No Hit
CACCAGAGGGAAACTAATTTTAAAATGTCTTTCTTGCTTATTAACAGATAAT1860.10034635677985304No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)