FastQCFastQC Report
Sat 31 Dec 2022
SRR5847009.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847009.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185663
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT6960.37487275332187886No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC5810.31293257137932706No Hit
TAACGGGGTCACCCAGACATCCTACTCATTATTCTCTTTTATCCATTTCAAA2980.16050586277287343No Hit
TTACACGGGGTTTTATGTTACAAAACAGGTTATTTCACTATATGTATGTTTA2670.1438089441622725No Hit
CTTTGCGGGGGGAAAGAGAGTGGCAGAAAAACTTTGAGGAAAGTCGAGATGG2640.14219311332898854No Hit
ATTTTAGGGAATTTCTTGTATTTCTATATACAAATAACAACCTAGATGAAAA2420.1303436872182395No Hit
TAGACACGGGACTCAACCTGTATTTTTCTTTTATACTTGAATTCTTCAAAAT2400.12926646666271685No Hit
TAGCCGGGACAGATTAAAACATTATTTATCACATTGTTACTTTGTCAGACTT2360.1271120255516716No Hit
AATCTAGGGATCTCAAAAAAAGAAAGAGGAAAAGATATACATAGAAACAACA2340.1260348049961489No Hit
AGCGTGGGGACGCTAACGTAGATAAACACCTTAATAATCTCAGTTAATACTG2330.12549619471838763No Hit
ACAAAATGGGAGCAGAAGTGGCACAATTGGGGGAAGAAAATGGCTTTTTCTC2300.12388036388510366No Hit
AAGACAGGGACAAATCTCCTTAATTATAACATTCACAGCCACAGAACTAATC2290.12334175360734234No Hit
TCTACTGGGCATTTTTTAAGGTTGGGTCTTTCAGGCTGGTTTTGGTTTGTAT2280.12280314332958102No Hit
AGTTTAGGGGAGTCTATAGATCAGAATGAATGGGGCCTAAAGTTTTAAAAAC2280.12280314332958102No Hit
ATTGCCGGGGAAAACAGAATCAACAGAATGTATTCCTGAACAAGACCTGAGG2270.12226453305181968No Hit
GATTACGGGGTCAGGGAGAACCTCAAAGTGTGGATCTATCCCGAGGGTACTC2260.12172592277405839No Hit
CCTTCAGGGGTATAGGTCATTTTGAGTTGTTGTGGGATAGTCATTTATAGTT2250.12118731249629705No Hit
GTCTTTGGGAGCCTAGTCCTCTCCTCCTCACCACCTCCTCAGCCACCAGCCT2240.12064870221853573No Hit
TGCTTTGGGCCTTGATGATTTTTTTTATCACTGGTTACTATCTTCTTAAAAA2220.1195714816630131No Hit
GGACTGCGGGAGAAGGGAAGGAAAAATGTAAGGTTTAACAGTAAGCACTTGC2220.1195714816630131No Hit
CGTTCTGGGAGAACCTGTGATGTGGGCAATGGGGAGAATGAATGTGACTTTT2200.11849426110749045No Hit
TTCATAGGGTATTTTAGCAGTTGATGTATTTTGCCTTCACAGTACATTTCTA2200.11849426110749045No Hit
TGCAATGGGATAGGAATTTTGTTTTTGGTTTCTTTATCATGCTACAGAGAGT2190.11795565082972914No Hit
CACAGCGGGGCAATCAGCTAGAGCAATGTAGGCTTTTTTTAATTTAAATTAT2190.11795565082972914No Hit
ACAGCAGGGAGTGGAAAAGACCATTTTTATTCAATCTGGGAAGTGTTGTCAG2180.11741704055196782No Hit
AATGTGGGGATGGAAAGGTTGGACAATGTGCATGAACAGATAGGGGGGAATT2150.11580120971868386No Hit
ACGCATGGGAACCAGGGAGGCGAAAGACCTCTACAACAAGAATTACAAAACA2150.11580120971868386No Hit
AAATACGGGACATCCATCCAGCGGAATACCATTTCCCTCAAACCAGCAAATA2130.1147239891631612No Hit
CTTTAGCGGGCGGCGGCGCACCTCGTGGCGAGAATCGGGAGAAGGAGGAGAC2120.1141853788853999No Hit
CTTCATGGGATTGCTTACACTTTTGAGGTCTTAGTCATAAATAATTTGCCTA2120.1141853788853999No Hit
TGTACTGGGGTGAACTGTCAAAGAACTCTGATATCGAACAGTCTTCAGATAG2110.11364676860763857No Hit
CACCATGGGAGTTTAACTAATGTGGGGCTGGCCACGTGGAAGACAGTTATTA2100.11310815832987725No Hit
ATTGCTGGGGGGTAAGGTTAGGTTACTGATGTGAGATTTTTTTCTTCCTTTT2090.11256954805211593No Hit
CTCCAGGGGACAGTCACCTAAGTCACTGAACACAAATGTGATCAGATTATTC2080.11203093777435462No Hit
GCTGCTGGGATTTCTTATTATGCTGCAACAGTATTATTTCTTGTCTTATACA2080.11203093777435462No Hit
CGTAGTGGGGGTTGGTTAAGGAGTTGTTTAGAAAGGCAAAGATGTTTAGAGT2080.11203093777435462No Hit
ATGTCGGGATTGTTACAGAAATGGCATTGGAACCAACATGGCACTGTGAAAA2080.11203093777435462No Hit
AAATGCGGGGAAAAAACCACAAGCTCACTTGCCTGTGCATACAGAAAAACAG2060.11095371721883196No Hit
TATCACGGGATGAATGCATATCCTATTTCCAGGCAGGCTCTCTTACTTGAAC2060.11095371721883196No Hit
TAGGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA2050.11041510694107064No Hit
CACCAGAGGGAAACTAATTTTAAAATGTCTTTCTTGCTTATTAACAGATAAT2050.11041510694107064No Hit
TGCGTTAGGGAAATCAAGTTAGATTTATAAAAGGGGTTAATTTTTGGCCTAC2040.10987649666330934No Hit
AAGTCTGGGATGTGTTGGAAGTGACCAAAAAATTCATGAGAGATCCAATTCG2040.10987649666330934No Hit
ATACGGGGGACAGCAGTTCAAGCCGCGGAGCACCAAGAGGTGGTGGCCGTGG2030.109337886385548No Hit
TTACAGGGGGAGGAAAACTGAGACGTGCACCCCCCATGGGATGGAGACCCGA2030.109337886385548No Hit
TACGACGGGGACTGCATAATTTTCTTGAAGACGTGTAACAGATCTGTGGCTG2020.10879927610778668No Hit
TCTGTGGGGACTTTCAGCAAAGAAATTTATTTTGAGAATATGAATATTTCAG2020.10879927610778668No Hit
TTATAAGGGGATCTCGATATTTCAGATGGGCTTTTGATGCACTGTTGCCAAG2020.10879927610778668No Hit
TCTAGCGGGCGATCTGGTCTTGGGGAGCAAGCAAAAGTGCAACAGATGTTAA2000.10772205555226405No Hit
TTATATGGGGAAAAACAAAGAAATTAACACATTTAAAAAATGAATGATAGCA2000.10772205555226405No Hit
TGCAGTGGGGTATAGATTCATGTTTTTCTGTTTTAAAAAGTTGAGCTAATAC2000.10772205555226405No Hit
GATAGGGACCTTTGACCTGCCTGCCACCACTCAGTATGTTTCCATCACAGTA2000.10772205555226405No Hit
GACAATGGGATAGTACACTACATGTATCTGTATTATAAATAGGCTTTTAAGG1990.10718344527450273No Hit
TCAGTAGGGGATGTGGGAGTTTAGTGCTATAAACTTTCCTCTTAACACTGCT1990.10718344527450273No Hit
TTGCTAGGGTGATTGAATAAATAAATATAAACATATGGAGAAAGAGACAAAT1990.10718344527450273No Hit
TTCCCCGGTAATTTTTGAAAGGAAAAATGTATAACAAGTACTATTTACATAT1990.10718344527450273No Hit
CTTTTGAGGGGGTTAAATGTTTACTCAAATGTAGTAATAGTATGAGGCCAAA1990.10718344527450273No Hit
TTTGGAGGGGGGTGTAGTGTTCTATAAATATTCATTAAGTTACTTAGCTTGT1980.1066448349967414No Hit
ATGCATGGGGTAAAGACATAGGGATAGGTGGGAGAGGTCCATTCTTTCATAA1980.1066448349967414No Hit
TCAGTTGGGCGATCTCGAAATGGGAATCTGAATAGTTATTTTACTTTTCATG1970.1061062247189801No Hit
AGAACAGGGATAGTATTTCCTTGTATAAAGCACTTTACTACCTACCACTTGT1960.10556761444121877No Hit
GGCTTCGGGTTGTCCTTTTATGTGACATGTTTTCCCCACAACTGTTTTTTCC1960.10556761444121877No Hit
AGTCCAGGGACCGTGGCATCTTCCCTGTGCTGTGCAAGGACCCAGTCCAGGA1960.10556761444121877No Hit
ATATATGGGCCTCGGGGCTTTGGTGGGATCGGTGTCCTCAGGATGAGATTTA1960.10556761444121877No Hit
CAGCTCTCCCACCACTTTTCTCTATTGCATTTGCTCTCAAACTAGGGAGATT1950.10502900416345744No Hit
TGCGCAGGGATGGTAATGTCCAGTTTTAAAAATATTGGACATCTTCAATCTT1950.10502900416345744No Hit
AAGTTGGGGATAACTTCTGTTATTTCAGTAATAATAATTAACCCCAAAATTC1940.10449039388569611No Hit
AGATCAGGGGGTCTTACAGCTGATCCGGTTCTTGCGGCGGTGCGTGCTGGCG1940.10449039388569611No Hit
GAATGTGGGATTTTCTTAATGAAACAAAAGGGAAAATCAGCCCAATAATAAT1940.10449039388569611No Hit
TCAAGTGGGCATAAAAGATCTCAACATATAAATATTGCTTTTAGCCTGTGAT1940.10449039388569611No Hit
GGGGTGGGGAGGAAGTTTAAACTTAAGTTTTCCTTAAGGGTCAGCCCAACAA1940.10449039388569611No Hit
GACACTGGGTGTGTTAATGGGTACCTTTAGAGTAGTCATTCTCTTAAACTAT1940.10449039388569611No Hit
CGCACTGGGGGGGAGAACTTGCTGGTGAAAATCGGGGACTTTGGGATGTCCC1920.10341317333017348No Hit
GCATCTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1920.10341317333017348No Hit
AATTGAGGGCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTA1920.10341317333017348No Hit
TCGCGGGGGGATAGGAAACATTGTGAGCTTGGGCAGGAAGGACGATGACTGG1920.10341317333017348No Hit
TGTTGCAGGGAAGTCTCAATGTTCCATTCAGTCTGCAGCTATTCACACACAC1900.10233595277465085No Hit
ATAGCCGGGACTTCAGCTGCTGCCAAAAGACGGAACCACGGATGTAAGGACA1900.10233595277465085No Hit
CTAGGAGAGGGAATCCTTTCAGTGAAATACAGTCATGCTCTGCATAACGATG1900.10233595277465085No Hit
TTATATGGGAACCACCACCAAGCAACTATTTTGCCATCTTAACATACATCTC1900.10233595277465085No Hit
GGTTACGGGTATGTTCCAGATGTTCTATTTTGGTCTGTGATCCTGTTCTTTT1890.10179734249688953No Hit
CGATTGGGGTTCATGGCAAAATAACCCACATAATTAACTGCTTTGTTACAAA1890.10179734249688953No Hit
TGACATGGGGCATGCTCACATGAGAAAATCACAAATTTGGCTCTAAGCTTTC1890.10179734249688953No Hit
ACACATGGGGGCCATTTTTGATCCCAGAACAGTTTCTCATAGATTAGAAATA1890.10179734249688953No Hit
CGTTCAGGGGGAGGAATATTTGCAAAATTAACTAGATATCATAAATATTTGA1890.10179734249688953No Hit
TTGTAAGGGTGAAGTAGGCATATGAAAGAAAAGGCACTTCTTGGACAAGCAC1890.10179734249688953No Hit
AGACCTGGGACACAGGAAGAGAGCAGGCAGCATCAGTATCGGCTCAGCATCC1890.10179734249688953No Hit
TTAATTGGGATAGGGACTTGTCTTTTTTTCTTTTTACATACAGCTTTTCCTA1880.1012587322191282No Hit
ATACAAGGGATAATTTATTATGGTATTAAGTTCAATAGTGATTGGTTAAATA1880.1012587322191282No Hit
CATTCCGGGGAATTGTCCTATAATAAATCACTTATTTACAACCAATCAAACT1870.10072012194136687No Hit
TCTTAAGGGGAAATCCTAAATGATATATGGCATCATAAATAAAATATTATAC1870.10072012194136687No Hit
ATCAAAGGGGCGCTGCTCCGGGAGCCGCTGTGGCAGCGTATGCTGCCACGGG1860.10018151166360557No Hit
GTTCCGGGGTTTTGTTTTGTTTTTGACTTATTTGAAGATCTCAAAGTCTTTG1860.10018151166360557No Hit
TTCTATGGGACCTCCTAATTTTGCCCTTCAAAATTGCCAAGAGGTTATTTCT1860.10018151166360557No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)