FastQCFastQC Report
Sat 31 Dec 2022
SRR5847007.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847007.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39541
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT4691.186110619357123No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC4281.082420778432513No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAA910.23014086644242687No Hit
AGCTCGGGACCTTGTAACGCGGGAACTATAGTTTTTGTTTCAGAATGTTGTT880.22255380491135782No Hit
ATGTCGGGGGTGTAGAGCAACTTTATTTGTAATAATCGAAACATGGAATCAG780.19726359980779445No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTTATACA780.19726359980779445No Hit
TGCACAGGGAGATTAAAATATAAGCACTCAATAAAATATAACCTTTAGAAGC760.19220555878708176No Hit
CGCGTAGGGACCCATCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCACCC750.18967653827672543No Hit
ATCAGAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG740.1871475177663691No Hit
TGGATAGGGATCTCCAGGTAGGAAAAAATGAAAGCTATTTCATGCAAACATT710.17956045623530006No Hit
AGCAAGGGGATATTTTCTCTGTTTTTTATGTTGTTGTTGTTTCTACAAGCAG710.17956045623530006No Hit
TATTGAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA700.17703143572494373No Hit
CACGCAGGGATTCAGGTAATCTATTCCTAAGTAGCTTTCAAGCAGTCAGAAA690.1745024152145874No Hit
TAACAAGGGACATAATCGGAAGTAAACACTCCTCAGCAAATGCAAAAGAACT690.1745024152145874No Hit
ATCTTGGGGGAAGTGCAGCTCATGTTTTTAACTTTTAATTTAAAAACACAAA690.1745024152145874No Hit
CTATGCGGGATATCCTAACTGATACCTTTTAAAGAACAGCCAAACAGATTTA670.1694443741938747No Hit
AGTCCTGGGGTAAAAAGTCATCTTTCCCTCACAGAAAGAAACGAAAGAAAGC670.1694443741938747No Hit
CTCTCAATGGGGAATTAAATTAAGTTTTGTAATTTTAAACTTTAAAAACTTC660.16691535368351837No Hit
TAAGCGGGGACACTTTGTTAGGACGAGTCTTTCAGATTTTTCCCTTGATCTT660.16691535368351837No Hit
CTTAGCGGGGGCCTTCATGATTCAATTATCTCCCACCGAGCCTCTCCCACGG660.16691535368351837No Hit
TTCGCCGGGCTAGTCCCGGGATTGTACTTTTTGTTTTTGTTATAAAGGAAGA640.16185731266280567No Hit
CATCACGGGCGATCTTCAAGGGGGCTTAGGACTTGGTTGCCTCAAGTGTCCT620.156799271642093No Hit
GCTGACGGGAGAACAAGCCTTAGGAAAGACATTACTACCTATGGAAAACATG620.156799271642093No Hit
GTATTAGGGATGTCCATTTTTACTGCAAACATGAGGGAAAATTCCTGTTGTG620.156799271642093No Hit
AGGTCTGGGGCGCAGCTCATTCTTGGAATCCCAGAACAGGCCTTAAGTCTTC610.1542702511317367No Hit
CCTAATGGGAGCAAGAAAAAATGTAAAGAAATTAAAGGGTAATTTGTGACTT610.1542702511317367No Hit
TGGTAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA590.149212210111024No Hit
GTCAAAGGGATCTCACCGTCCTTTGGTTGCTTTACCTTGTATACTTACAGTA580.14668318960066767No Hit
TTTTAAGGGGGGATTGCAGGCGTGAGCCACCACGCCCAGCCCAATTCATTTT580.14668318960066767No Hit
TCATCAGGGGAGATGGGGTCGGAATTTGACACAGCCTAGGGCTTGGTTCTTG580.14668318960066767No Hit
ATCAGAGGGAGAAGGAAAGGATGCAGTAGCATAGTCACCTGGAGCTAATTCT580.14668318960066767No Hit
GCTGCGGGAAGGGAGGAAAAAGATGTTAAACTTTGTTTTGTAAATGCTAATA570.14415416909031134No Hit
GCATATGGGATGCCTATGGAATAATCTCCATTTCCAGAGTGGATAAACTTGA560.14162514857995498No Hit
AGCTTGGGGATCCATGGCTCATTTGACACCTTTTTAAATATCAGGACAAGTC550.13909612806959865No Hit
TCTGTAGGGACCTTTGGACAATTATTTGTCATTATCTGCTGAAGCTTGCTAT550.13909612806959865No Hit
TATTCAGGGACTATCAGAAAGTGAATAAGAAAAATGAACACGGCAAATTTAG550.13909612806959865No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTT550.13909612806959865No Hit
TATTTAGGGTCTGATCCGGGGAACACAAGTTGCTATAAGCAGTCCTTGTTGG550.13909612806959865No Hit
CACAGGGGGTGACTTGTAGTGTGTTGGTGAAATGCATGCAGGAAAATGCTGT540.1365671075592423No Hit
GTCAGCGGGACGAGAGCGAGAGCGGGACCGAGAGAGAGAAGAGGAAAAGAAG540.1365671075592423No Hit
TTTTGTGGGGGCAGTGACAGCTATTTTTACAAAATTTAAATCTGCAAATGGA530.13403808704888598No Hit
TAGACGTGGGTTCATAAAAAACAATAGTACTGTGCCTCTTTCTTCTCAAACA530.13403808704888598No Hit
AGTATCGGGATAAACGAACATTGAACAGAATGATAGCATTTTTCCTCTCTTC530.13403808704888598No Hit
AATTGCGGGGTTTACTGGCCTTGTTTCACTTTTATTCCTTGCAGTGTCCTGT530.13403808704888598No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAACTGTCTCTTATACAC530.13403808704888598No Hit
AGATTAGGGACCTTCAGCTAAAGCAGCTATTGACTGGTTTGATGGTAAAGAA520.13150906653852962No Hit
AGCAAGAGGGACAGTAGTTGAAGTTTGGAACATAGCCAAATTAAAAATGGAT520.13150906653852962No Hit
AAACTTGGGAAGTAGCTGGGATTACAGGCACCTGCCACCATGCCCGGCTAAT520.13150906653852962No Hit
GTAAAGGGGCTATACCCGGGATCTAGATTGTTTCCATTTTGGGGTTATTAGA520.13150906653852962No Hit
AAACAGGGATTCTAGAATTTAAAGTTCTAAGATTAGTATAAAGAGTATATAG520.13150906653852962No Hit
CAGCTAGGGACCTGTTCAATAGTCTGCCATTCTTCTCAGAAATGGGATATTA510.12898004602817328No Hit
ATGTATGGGAAGTGGTACAGTGAATTTGCTTTAACAGATGTTGAAAACTAAA510.12898004602817328No Hit
GATTAGGGAAGGAGTCAAATTTATTTTCCCAATTCAACTTCATAATTATCAT510.12898004602817328No Hit
CGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTA510.12898004602817328No Hit
TTGCCGGGACCCTCCTCTGGCGGTCCTTCCACCTTCCTCTGTCCTCCGGATG500.12645102551781695No Hit
TTTGCAGGGAGGACCAGAAAACCAAATACCACATGTTCTCATTTAGAAGTGG500.12645102551781695No Hit
GTGAACGGGATAAAATATTTAAGTATTTGAAAAAGAAACAAAATGTCTTCAT500.12645102551781695No Hit
TTTGCTGGGACATAAACAGAATTTTAAAGAAACTATATGATCATCTCAACAG500.12645102551781695No Hit
CGTTCTGGGCTCTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGA490.1239220050074606No Hit
ACAGTAGGGCAGTAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCCTTCT490.1239220050074606No Hit
TTGCTAGGGCTCATGTAGGGATGGCCATTATACCAAATATTGGGAGGACCTG490.1239220050074606No Hit
GGCACTGGGAGCTCAAGTTTGGGGTCTCTCTCTCTCTCTTTTTTTTCTTTTT490.1239220050074606No Hit
AACTTAGGGTAACATGACAGGCTCACTTTGTTCATTAAAACACAAAACCAAA490.1239220050074606No Hit
TGCCCCGGGAGAACACTGAGGGGTCAAGGCAGGTGGACTGCTTGAGCCCAGG490.1239220050074606No Hit
GACGCAGGGTCCGATCTTAAGAAGGGATGTGTGGCCACATGGGATGGGCCAG480.12139298449710427No Hit
AATGTGGGGCGATCTCAGCAGGGGACAATCAATGCTATTTATTGTACCTCTG480.12139298449710427No Hit
AGTACAGGGAAGGAAAAAATGAAGGAGCTGTCCATGCTGTCACTGATCTGCT480.12139298449710427No Hit
TACAAAGGGATTTTATAGTAAGTCACATTTAGTAAGTCTACTGAATGTAAAA480.12139298449710427No Hit
CTCAGCGGGGAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAAC470.11886396398674794No Hit
GTTAAAGGGGCTCTTCGTTAAGTCGGCCTTCCCAACATGGCGCAGTCTATTA470.11886396398674794No Hit
ATGCATGGGAACCCATACAAATGCCAAGCAGAATTTTTTTTCATGGGGAGTA470.11886396398674794No Hit
GCTTAAGGGCTACAAACCAAAACAAGAACTTTTAAATCTGGGATATAAATTA470.11886396398674794No Hit
GTATCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC470.11886396398674794No Hit
GGTCCAGGGGCTCTGGCCCAGAAGGAGGCCAAGAAGGACGAGCCCAAGAGCG470.11886396398674794No Hit
CATGTAGGGAACTTCCTTATTTTTGGAGAATTTTAGGAATACTCAATTTACA470.11886396398674794No Hit
CAACAGGGGAACTACACCCGCCCCACCACTTCTGGTTGCCTCTGTTGACTAT470.11886396398674794No Hit
CAGCCCGGGAAGACGAGGATTCTCAACGTCCAGTCCAGGCTCACAGACGCCA460.1163349434763916No Hit
TTGTTGGGGCATACTTGTCTATTTTAAAGCAGGACTGCAATGCTTTAATAGG460.1163349434763916No Hit
TGGTATGGGATTTGATTAAATCCTTCTCCTTATTCGAATTTCAGTTTAAGTG460.1163349434763916No Hit
GTAAGTGGGATGTGGAGAAAAGGAAACCCTTGTACATTGTTGGTGGGAATGT460.1163349434763916No Hit
GTTGCTGGGAAGGATTCTGCAGAAAAAAAAGAAAAAAGTCCTTCAGTTTAGA460.1163349434763916No Hit
ATTTTAGGGATTAAAAATGATTCAGATTTATATTTGAGATCATTTTAGTCTT460.1163349434763916No Hit
TCTCAAGGGATGTGTCTACCTGAGGGCTAGTTGAAGGATCCAGGAGTATTTT460.1163349434763916No Hit
TGTGGAGGGAAGGTCCCATAGCTACATGGTACAGGGCTGTTGTCTGCTTGCT450.11380592296603524No Hit
CATGGCGGGGGAGCTGATGCAGAGGAGGAAGCAGCTACCCGAATACCTGCTT450.11380592296603524No Hit
TGGCCTGGGTAAAATAGGAAAAAGAAATTTCTACATTATAAAATGGCTTCAG440.11127690245567891No Hit
GATGCGGGGATATACCTCTTCTTTCTACTTACTGTGTACTGGGTTTCCCAGC440.11127690245567891No Hit
ATTATAGGGATTTGTATACTTATGATTTTCCTTTTTGCTAAGTATAAGTATT440.11127690245567891No Hit
TTGTGGGGAGTCCCCTTCCTTCGGTGTTTGAGACCACTTCATCTGGACCGAG440.11127690245567891No Hit
GTTTTGGGTGTTCTGATCACTACTGACTTGTTGGCTCGCGGGATTGATGTGC440.11127690245567891No Hit
TACTAAGGGACTCAGCCTCTGTGCTGAAATAATTCCTCTCCTAGGTTTCTTC440.11127690245567891No Hit
GCTAGCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC440.11127690245567891No Hit
CTATTAAGGGAGTTTCTAATGCATCAAATATATACCTCAGTTTTCATGATTT440.11127690245567891No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCCTGTCTCTTATAC440.11127690245567891No Hit
CGTAATGGGGGAGATCCTTTAACGGAGTGGGATGGGTGGATTTACAAAGAAG440.11127690245567891No Hit
TCATCTGGGATATGTCTATATACTTTAAGCGTGAACAGAGAAGAATACTCAG440.11127690245567891No Hit
CAATAGGGGACTGCAGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCTCT430.10874788194532257No Hit
CGTCCAGGGACATGCTTCTTTTTCAAGTCTAGAATTTCCATGTAGTTCATTT430.10874788194532257No Hit
TGGTCAGGGTCCACATGTCTTTATGTATATAAACATGTACTCATACTGCCAA430.10874788194532257No Hit
TCCATGGGGCTTATTTGAATACCAACGATAGCTATTTTGGGAATTTCGATCT430.10874788194532257No Hit
CAGACTGGGGATATATTAAAAACCACATGTGGGAATTCTTTCCTAATTTTAG430.10874788194532257No Hit
GTCCAAGGGGTAAGTAAATCTACTTTATAAAGGCACAAATATATTCACAGTA430.10874788194532257No Hit
TACCAGGGGTGCCTAATAAATACAGGGTTTCCTTCTGGGAATGATGAAAACG430.10874788194532257No Hit
GTAGCGGGAATAGCATGGGTTAATAAATTATTTTTCGTTCCACTTTCAATTA430.10874788194532257No Hit
TTTATCGGGATTGTGTCTGTATCTAATTTAAACAGATGTTAATGGACGTCTG430.10874788194532257No Hit
GGTTTTGGGGAAAGGTATTTTTTTAATATAAATTTATTGATACTATGAGTTT420.10621886143496624No Hit
TATTGAGGGACTTTTTTTCCAGTAAGAATATCAAGGCAGAAGGTGGGAAGGA420.10621886143496624No Hit
GCTATAGGGACTCCCTGTGACTTTGGGGCCAATTCCTCTGACAGTTAGAAGG420.10621886143496624No Hit
TTGTATGGGCATAGTTCTTGAAACATAATTTTTCTTTTTTTCTCTCTCCAGT420.10621886143496624No Hit
TACGGACGGGTTGGTTTAAAAACAAAAACCCTTATATACATGGAATAGTTAT420.10621886143496624No Hit
TGTCGCGGGAGTATAGTTTTTGTGAATCTTTACATGATAGCATTATCTTTTT420.10621886143496624No Hit
ACTAGGGTAAAGTTAGCAGTAGGAAGGGAATCCTACAGACTAGAGTGGAAAT420.10621886143496624No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAAACTCGTATGC420.10621886143496624No Hit
TCGCCTGGGATTAGAACTGCTGGTAAAATTAAGGATGGAAAGTGTCAGTACT420.10621886143496624No Hit
CTCAGTGGGAAGGGGTTGTTGAAAACTAATTGTATTAAATGTCTTTTGATAA410.1036898409246099No Hit
CGGTAGGGATGCATGATTTTGTTTTAAAGCTAGGTTTCTGCTAATAAAGTTT410.1036898409246099No Hit
TCCGCAGGGTCCTAACAGGAAAAGTGGAGTTCAAAATACCCAATTGGAGAAA410.1036898409246099No Hit
TCTAGTGGGCCGATCTGGTTGTGGGGAATGTCTGAATGAAACAATTATTAGA410.1036898409246099No Hit
GGCACTGGGAATTTACCCTAAATTTTAATTGCCCTATAAGACTTCATAATAT410.1036898409246099No Hit
GCCGTAGGGCAGGGAAAACAATAATCCAAAAGGATTAAAAGGAACAGTGCAA410.1036898409246099No Hit
GTACCAGGGCAGCAGGCTGGTTTTAACCTACGCAAAGTTAACAAACACATAA410.1036898409246099No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCCTGTCTCT410.1036898409246099No Hit
AGGTCTGGGAGGCTTAGTAGGTATTTTAAGAAGATTAATGATACATCTAATG410.1036898409246099No Hit
ACAGCAGGGCAGTTTGCACCTGGCCTGTATCACCACTTAGCTCTCACTCTAG400.10116082041425356No Hit
TCTGGTGGGACCCCCAGCCTGATTTACACATATTTTCTACTGCTCTATAGGT400.10116082041425356No Hit
TAATTTGGGACAGAAGTGTATGTTTCCATTCGCATGAAATTCTAGAAGAGGC400.10116082041425356No Hit
TGACGCAGGGGATCTTAGGTCGGGGAATCCAAATGTCTATCACAGGATAAGT400.10116082041425356No Hit
CGTACAGGGGGGGCTATAGCGATGGGGACTGCGGAATTACGAGGGCTGGCTG400.10116082041425356No Hit
CGAAATGGGATCCAATAATCATGGCCCCTCAATTTATTTGTGGTCACCCAGG400.10116082041425356No Hit
TAAATGGGGAGAGGAATTGAATTTAAAAATGAGAGAGTATTAAAACTCATGT400.10116082041425356No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAA400.10116082041425356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)