FastQCFastQC Report
Sat 31 Dec 2022
SRR5847005.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847005.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39051
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT4691.2009935725077463No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC4241.0857596476402653No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTTATACA860.2202248341911859No Hit
CTATGCGGGATATCCTAACTGATACCTTTTAAAGAACAGCCAAACAGATTTA790.20229955698957774No Hit
GTGCCCGGGAGCACTTATGTATACACTTTTTCTGTACTTACTAGGTTAAGGC740.1894957875598576No Hit
GTAAGTGGGATGTGGAGAAAAGGAAACCCTTGTACATTGTTGGTGGGAATGT730.1869350336739136No Hit
TATTGAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA730.1869350336739136No Hit
ATTTTAGGGATTAAAAATGATTCAGATTTATATTTGAGATCATTTTAGTCTT720.18437427978796958No Hit
AGCTCGGGACCTTGTAACGCGGGAACTATAGTTTTTGTTTCAGAATGTTGTT710.18181352590202557No Hit
CTCTCAATGGGGAATTAAATTAAGTTTTGTAATTTTAAACTTTAAAAACTTC690.17669201813013752No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAA680.1741312642441935No Hit
ATGTATGGGAAGTGGTACAGTGAATTTGCTTTAACAGATGTTGAAAACTAAA670.17157051035824947No Hit
GATTAGGGAAGGAGTCAAATTTATTTTCCCAATTCAACTTCATAATTATCAT670.17157051035824947No Hit
CTTAGCGGGGGCCTTCATGATTCAATTATCTCCCACCGAGCCTCTCCCACGG670.17157051035824947No Hit
AGCAAGGGGATATTTTCTCTGTTTTTTATGTTGTTGTTGTTTCTACAAGCAG670.17157051035824947No Hit
TGGATAGGGATCTCCAGGTAGGAAAAAATGAAAGCTATTTCATGCAAACATT660.16900975647230546No Hit
TAAGCGGGGACACTTTGTTAGGACGAGTCTTTCAGATTTTTCCCTTGATCTT660.16900975647230546No Hit
ATCAGAGGGAGAAGGAAAGGATGCAGTAGCATAGTCACCTGGAGCTAATTCT660.16900975647230546No Hit
ATCTTGGGGGAAGTGCAGCTCATGTTTTTAACTTTTAATTTAAAAACACAAA660.16900975647230546No Hit
CAATAGGGGACTGCAGAGTTCAGTCGAGAGTTCCAGTTGCACCAGCATCTCT650.16644900258636142No Hit
GTCAAAGGGATCTCACCGTCCTTTGGTTGCTTTACCTTGTATACTTACAGTA650.16644900258636142No Hit
CCTAATGGGAGCAAGAAAAAATGTAAAGAAATTAAAGGGTAATTTGTGACTT650.16644900258636142No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTT650.16644900258636142No Hit
TCTGTAGGGACCTTTGGACAATTATTTGTCATTATCTGCTGAAGCTTGCTAT640.1638882487004174No Hit
CGTTCTGGGCTCTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGA610.15620598704258534No Hit
TGGTCAGGGTCCACATGTCTTTATGTATATAAACATGTACTCATACTGCCAA610.15620598704258534No Hit
TGCACAGGGAGATTAAAATATAAGCACTCAATAAAATATAACCTTTAGAAGC600.15364523315664133No Hit
GTCAGCGGGACGAGAGCGAGAGCGGGACCGAGAGAGAGAAGAGGAAAAGAAG600.15364523315664133No Hit
TTGCCGGGACCCTCCTCTGGCGGTCCTTCCACCTTCCTCTGTCCTCCGGATG580.14852372538475328No Hit
AGTCCTGGGGTAAAAAGTCATCTTTCCCTCACAGAAAGAAACGAAAGAAAGC580.14852372538475328No Hit
TGTACAGGGCAGGATGTGGTAGATACTTTAACAAAGAGTAGAACTATTACCA580.14852372538475328No Hit
TTTTAAGGGGGGATTGCAGGCGTGAGCCACCACGCCCAGCCCAATTCATTTT580.14852372538475328No Hit
TTCGCCGGGCTAGTCCCGGGATTGTACTTTTTGTTTTTGTTATAAAGGAAGA580.14852372538475328No Hit
AGGTCTGGGGCGCAGCTCATTCTTGGAATCCCAGAACAGGCCTTAAGTCTTC570.14596297149880924No Hit
GTATCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC570.14596297149880924No Hit
TAACAAGGGACATAATCGGAAGTAAACACTCCTCAGCAAATGCAAAAGAACT550.1408414637269212No Hit
AATTGCGGGGTTTACTGGCCTTGTTTCACTTTTATTCCTTGCAGTGTCCTGT550.1408414637269212No Hit
TTGTTGGGGCATACTTGTCTATTTTAAAGCAGGACTGCAATGCTTTAATAGG550.1408414637269212No Hit
CACGCAGGGATTCAGGTAATCTATTCCTAAGTAGCTTTCAAGCAGTCAGAAA540.13828070984097718No Hit
GTACCAGGGCAGCAGGCTGGTTTTAACCTACGCAAAGTTAACAAACACATAA540.13828070984097718No Hit
ATTATAGGGATTTGTATACTTATGATTTTCCTTTTTGCTAAGTATAAGTATT530.13571995595503317No Hit
TCTAGTGGGCCGATCTGGTTGTGGGGAATGTCTGAATGAAACAATTATTAGA530.13571995595503317No Hit
TATTGAGGGACTTTTTTTCCAGTAAGAATATCAAGGCAGAAGGTGGGAAGGA530.13571995595503317No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGT530.13571995595503317No Hit
GGTTTAGGGATGGATAAAATCCTGACTCAGTCCTTACTAGCTATGTGGTCTT520.13315920206908916No Hit
ATCAGAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG520.13315920206908916No Hit
ATGTCGGGGGTGTAGAGCAACTTTATTTGTAATAATCGAAACATGGAATCAG520.13315920206908916No Hit
TTTGCTGGGACATAAACAGAATTTTAAAGAAACTATATGATCATCTCAACAG520.13315920206908916No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAACTGTCTCTTATACAC520.13315920206908916No Hit
GTTAAAGGGGCTCTTCGTTAAGTCGGCCTTCCCAACATGGCGCAGTCTATTA510.13059844818314512No Hit
ATGAAGGGGATACAAGAGATGTCCTTCATCTAGGAGATGGCTGCTGAAGTAT510.13059844818314512No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCCTGTCTCTTATAC510.13059844818314512No Hit
TCTGGTGGGACCCCCAGCCTGATTTACACATATTTTCTACTGCTCTATAGGT510.13059844818314512No Hit
TCGCAGGGCAAAAACATTAAACGCAAACTGATTAGGATTTGATTTCTTGAAA510.13059844818314512No Hit
TCATCAGGGGAGATGGGGTCGGAATTTGACACAGCCTAGGGCTTGGTTCTTG500.1280376942972011No Hit
GGCACTGGGAATTTACCCTAAATTTTAATTGCCCTATAAGACTTCATAATAT500.1280376942972011No Hit
GTTTAAGGGACTGGAATGGAGCCCAGGAGAATCCTGCTGCAGTGCTGGATCT500.1280376942972011No Hit
AGATTAGGGACCTTCAGCTAAAGCAGCTATTGACTGGTTTGATGGTAAAGAA500.1280376942972011No Hit
GCTGCGGGAAGGGAGGAAAAAGATGTTAAACTTTGTTTTGTAAATGCTAATA500.1280376942972011No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAA500.1280376942972011No Hit
CCGTACGGGATTCCTCTTTCCTGTTCTACATGGGTTTTCACACATACTTGCT500.1280376942972011No Hit
TTGCATGGGGACAGGCTGCTCCCCAGAATACTGAAGAAGAAACTCTAGGAGT490.12547694041125707No Hit
TCCACGGGGACACCGAGCGAGCGCCTGGGCCCGAAGGGAGCGATGCTGTGGT480.12291618652531305No Hit
GCACAAGGGATTGTCTTTCTCTCCTAGCCCCCTCAGGAAAGAAGGACTATAT480.12291618652531305No Hit
AGCAAGAGGGACAGTAGTTGAAGTTTGGAACATAGCCAAATTAAAAATGGAT480.12291618652531305No Hit
ACATATGGGATGGCTTTCAGCTTATCTTATGTTCTATCTTTTGGTTCATATT480.12291618652531305No Hit
TTGTCAGGGACAGTTTGACAACAAAATGTTAACATACATGCTTATGTTCAGT470.12035543263936901No Hit
ATTGTTGGGCCTGCCACTACTCATATGTTTGCATTGGATATATATTGCATCT470.12035543263936901No Hit
AGTGACGGGCTGCTGAAGTTTTGGTGCCCACTGAAATTTTATGCTCAAAGTA470.12035543263936901No Hit
TAAAGAGGGACTGAAAGCTGTTCTAAATCCTAACAACTTTTACATGTCCAAA470.12035543263936901No Hit
TATTTAGGGTCTGATCCGGGGAACACAAGTTGCTATAAGCAGTCCTTGTTGG470.12035543263936901No Hit
CGTAATGGGGGAGATCCTTTAACGGAGTGGGATGGGTGGATTTACAAAGAAG470.12035543263936901No Hit
CAAAACGGGACATAGAAAAGATTTTATTTTAAAATGAGTTGTAAAGCTTGTG470.12035543263936901No Hit
CTCAGTGGGAAGGGGTTGTTGAAAACTAATTGTATTAAATGTCTTTTGATAA460.117794678753425No Hit
CGAAATGGGATCCAATAATCATGGCCCCTCAATTTATTTGTGGTCACCCAGG460.117794678753425No Hit
TGGTAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA460.117794678753425No Hit
TCCGCAGGGTCCTAACAGGAAAAGTGGAGTTCAAAATACCCAATTGGAGAAA460.117794678753425No Hit
GCCGTTGGGAGAGTTCTGCCTGTTACAAAGCTACAGAACTGTATTGTTTTTA460.117794678753425No Hit
AGCTTGGGGATCCATGGCTCATTTGACACCTTTTTAAATATCAGGACAAGTC460.117794678753425No Hit
ATTGATAGGATTCTCGGATGGCTGTGAGGCATTCCTTGGCAAGGGACGCTGC460.117794678753425No Hit
TGTATGGGGGGACCCCAGATTAACGAACCTCAGTTCTAACTCGGATGTCTGA460.117794678753425No Hit
CGCTACGGGATTACTGGTTTGTCTACCACCAAAAATTACTTAAATTCCAGGA450.11523392486748099No Hit
CGCGTAGGGACCCATCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCACCC450.11523392486748099No Hit
TTTTGTGGGGGCAGTGACAGCTATTTTTACAAAATTTAAATCTGCAAATGGA450.11523392486748099No Hit
GTAGCGGGAATAGCATGGGTTAATAAATTATTTTTCGTTCCACTTTCAATTA450.11523392486748099No Hit
TTTGTGGGGACTGTGTCTCTGCTCTGCATCCGCCATTTGTGTGTGTTTCTGG450.11523392486748099No Hit
TTCAGTGGGATGCTAAGAAAATAGTGACTATTTTGAAGTATGCTACTTCCCT450.11523392486748099No Hit
TACAGCGGGATGGGATAGCTCTCCTTTTTTTGTGTTCTTTTCATTTTTTATC450.11523392486748099No Hit
AGTATCGGGATAAACGAACATTGAACAGAATGATAGCATTTTTCCTCTCTTC440.11267317098153697No Hit
TACTAAGGGACTCAGCCTCTGTGCTGAAATAATTCCTCTCCTAGGTTTCTTC440.11267317098153697No Hit
CTCTATGAGGGATGAGGGAAATGCAAATTAAACCCACATTGGGATACCACTT440.11267317098153697No Hit
TAAATGGGGAGAGGAATTGAATTTAAAAATGAGAGAGTATTAAAACTCATGT440.11267317098153697No Hit
CAACAGGGGAACTACACCCGCCCCACCACTTCTGGTTGCCTCTGTTGACTAT440.11267317098153697No Hit
TACGGACGGGTTGGTTTAAAAACAAAAACCCTTATATACATGGAATAGTTAT430.11011241709559295No Hit
ATGTCCGGGAGGAGTCCTAATGTTTTAAAACATCATTGTGGTGATCTTGTTT430.11011241709559295No Hit
CTTTATGGGATGCTTCATATCTCTCTCCCGTCCTCCTGTTTTAGGGGCATAT430.11011241709559295No Hit
GACCATGGGCAGAAGTGAGCTGAATTTTGTTTCTTAGTGAAAAATAAGCTAA430.11011241709559295No Hit
GGTTCCGGGATACTTATAAGTTGGATAACTTTAGGAAAATGATTTCAACTCT430.11011241709559295No Hit
CATGGCGGGGGAGCTGATGCAGAGGAGGAAGCAGCTACCCGAATACCTGCTT430.11011241709559295No Hit
GGCACTGGGAGCTCAAGTTTGGGGTCTCTCTCTCTCTCTTTTTTTTCTTTTT430.11011241709559295No Hit
CATCACGGGCGATCTTCAAGGGGGCTTAGGACTTGGTTGCCTCAAGTGTCCT430.11011241709559295No Hit
TACAAAGGGATTTTATAGTAAGTCACATTTAGTAAGTCTACTGAATGTAAAA430.11011241709559295No Hit
GTATTAGGGATGTCCATTTTTACTGCAAACATGAGGGAAAATTCCTGTTGTG430.11011241709559295No Hit
GTCCAAGGGGTAAGTAAATCTACTTTATAAAGGCACAAATATATTCACAGTA430.11011241709559295No Hit
TGGTATGGGATTTGATTAAATCCTTCTCCTTATTCGAATTTCAGTTTAAGTG420.10755166320964892No Hit
AGTAAGGAGGGAGCCACACGGCGCGACAAGATGGCGGATAAGGAGAAGAAGA420.10755166320964892No Hit
GATGCGGGGATATACCTCTTCTTTCTACTTACTGTGTACTGGGTTTCCCAGC420.10755166320964892No Hit
TATTCAGGGACTATCAGAAAGTGAATAAGAAAAATGAACACGGCAAATTTAG420.10755166320964892No Hit
TGTGGAGGGAAGGTCCCATAGCTACATGGTACAGGGCTGTTGTCTGCTTGCT420.10755166320964892No Hit
GCCGTAGGGCAGGGAAAACAATAATCCAAAAGGATTAAAAGGAACAGTGCAA420.10755166320964892No Hit
GCTAGCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC420.10755166320964892No Hit
TTGCTAGGGCTCATGTAGGGATGGCCATTATACCAAATATTGGGAGGACCTG420.10755166320964892No Hit
CTCGTAGGGAGACCAGCTCTGGGTGCCTGATACCTATTTCCTGAACGATAAG420.10755166320964892No Hit
TAATTTGGGACAGAAGTGTATGTTTCCATTCGCATGAAATTCTAGAAGAGGC420.10755166320964892No Hit
AAACTGGGGATAGCCAAAAATAATTAAAATCAACCAGGACATGGGAGAGAGT420.10755166320964892No Hit
ATTATAGGGGCCTTTTCACAAGATGGCGCCGAAAGCGAAGAAGGAAGCTCCT420.10755166320964892No Hit
TACTAAGGGTCAGTGGGGGATTTGTGAACGGATTTTTTAATCCAGAAATAGA410.1049909093237049No Hit
TCATTAGGGCTACCCCAAGAGGAAGTTTTCTGAAATAAGATTTAAAAACAAA410.1049909093237049No Hit
ATGCATGGGAACCCATACAAATGCCAAGCAGAATTTTTTTTCATGGGGAGTA410.1049909093237049No Hit
TCGTGCAGGGATCCTCAGAGAGGACTGGAAGCCAGTCCTTACGATAAACTCC410.1049909093237049No Hit
GTGAACGGGATAAAATATTTAAGTATTTGAAAAAGAAACAAAATGTCTTCAT410.1049909093237049No Hit
CACTCAGGGATAACAGCCTAGTCCTATTATTAACTTGACTGGAGGAAGACAA410.1049909093237049No Hit
CATGTAGGGAACTTCCTTATTTTTGGAGAATTTTAGGAATACTCAATTTACA410.1049909093237049No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAAACTCGTATGC410.1049909093237049No Hit
TGTTACGGAGTCACTTTGCAGTTGCCAAAAGTCACTATCACATGGACTGTAA410.1049909093237049No Hit
ACGTCAGGGCACAGCCTTTTATTAGCAAACTTCTTGGTATGGGCGACATTGA410.1049909093237049No Hit
TATCTGGGGATTAAATCGATGGTACAAAACATACTTCTTTATGCCAAACACA400.10243015543776088No Hit
TACGTCGGGAAGGAAACTTACAAACTGCAACGCAGAGAAACTATTAAAGGTA400.10243015543776088No Hit
TTTGCAGGGAGGACCAGAAAACCAAATACCACATGTTCTCATTTAGAAGTGG400.10243015543776088No Hit
CGGTAGGGATGCATGATTTTGTTTTAAAGCTAGGTTTCTGCTAATAAAGTTT400.10243015543776088No Hit
GCTTAAGGGCTACAAACCAAAACAAGAACTTTTAAATCTGGGATATAAATTA400.10243015543776088No Hit
TAGCAAGGGTATCCACTGCACATAAGCACTTACACTGCAGGTAGGAAAATAT400.10243015543776088No Hit
AGGCTGGGAGTGGGATTGGGCCTGGTGGTCTTCTTCTTCAGTTTTCTACTTT400.10243015543776088No Hit
CTATTAAGGGAGTTTCTAATGCATCAAATATATACCTCAGTTTTCATGATTT400.10243015543776088No Hit
TGTGAAGGGTCTGGGAAGCGGGTAAATGCAAGTGGAGATACAGCATGACGGG400.10243015543776088No Hit
AAACAGGGATTCTAGAATTTAAAGTTCTAAGATTAGTATAAAGAGTATATAG400.10243015543776088No Hit
CAGTGCGGGGAGAACGGTCAAGAAAGAGTAGAAGTTGAAGAAGATGGCCAGT400.10243015543776088No Hit
GTCGGCAGGGGAAAAAAGAGGTCAACCACTGTTTCTGATAATGTACTTGAGT400.10243015543776088No Hit
CGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTA400.10243015543776088No Hit
TCGCCTGGGATTAGAACTGCTGGTAAAATTAAGGATGGAAAGTGTCAGTACT400.10243015543776088No Hit
AACGGGGGAGTGTATAGAATTATGCATATAGTATAGATATGTATCATATAAA400.10243015543776088No Hit
GCAAAGGGGAGCTGTTCTACCTGAATCCTTAAACTTCATTTTCATGCAAGGA400.10243015543776088No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)