FastQCFastQC Report
Sat 31 Dec 2022
SRR5847001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112350
Sequences flagged as poor quality0
Sequence length52
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGCCGTCT7530.6702269692923898No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTCGTATGC6030.5367156208277704No Hit
GAGTCAGGGGATCTCGTGTTGGGAGTCACTCTGTTGACAGTATCAATGGGAA1980.17623497997329773No Hit
TGTGCAGGGTGGCTATTCTAGTTCCTTTCCATATAAATTTTGGAATAAACTT1880.16733422340898976No Hit
ACTCTCGGGCAGAGGGTGTATTCAGGCAACTGGTAACTATGCCACCATTTCA1880.16733422340898976No Hit
ATAAGAGGGAATGTAAGACACGAAATTGTTAAACTGCTAGAAGAAAACATAA1680.14953271028037382No Hit
GAAGGTGGGGTTACTTGTAATTGAAAGTATTCTCAACAAATATAACCAAACT1660.14775255896751224No Hit
AGACCGGGGATGGGGCTACAGGAAGACAGCAAGGGAATCCAGACTGAGCAAA1660.14775255896751224No Hit
AAAGCGGGAGTTAAAATTAAAAGCAAAAGATTAGAAAAATTAAAACATTACA1630.14508233199821985No Hit
AGACTAGGGAGAAGCAAAGCTCAGAGAAGATGCATTAGGATCAGATTATAGG1610.14330218068535824No Hit
GCATACGGGAGGAGAGGCAAGAGAATCACTTGAACCCAGCAGGCAGAGGTTG1610.14330218068535824No Hit
AACCATGGAGGAAAACTCCAGTGACTATCAGTCAAACCTTGCTTAGGTAGAG1580.14063195371606588No Hit
AAACACGGGGACATATAAATGGCTAATAAGTATATGAAAAAATGCTCAACAT1560.13885180240320427No Hit
GTTGATGGGTATGGAGGAAGGTTTTGCTCATGCATGGCATGTTAGTCAATTT1560.13885180240320427No Hit
ATCTCCGGGACCCCTGGTCAATCAATGGCCCTCACTGGGAACGCTTAATGGG1550.13796172674677346No Hit
TCTCTGGGATTCACAGTTGCTTCAAAGAGAATAAAATACCTAGGAATCCAAC1540.1370716510903427No Hit
CTATCACGGGGAACTGCAAAATATACATTCTATTCAACAGTGCATGGAACTT1540.1370716510903427No Hit
GGGTAAGGGTCTCTAAAGGGGAAATCAGAGATAGTCCTGTAAGAAAACTTCC1520.1352914997774811No Hit
CATACTGGGATAGTAACTACTGAAGAGATAAATTGTAAAATGGAAACTATAA1520.1352914997774811No Hit
TTCTTAGGGACCTAAACACTTTATCTCCAAGTTACAAAAGTTTGAGGTGCAG1520.1352914997774811No Hit
TGTTTGGGACCATATACCATAATAAACTCTGAAGGCACGAGAAATCTAAATG1510.1344014241210503No Hit
TATGCTGGGAGGCAGAGTGTGGTTCAAATACGCCAGACACCTTTTGAAAGCT1500.13351134846461948No Hit
GCGCTAGGGGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGAAATAATCTTT1490.1326212728081887No Hit
AGTTTTGGGATAGTTCTATGCTTACTGTTGTGCATATACTGGCAATAAAACT1490.1326212728081887No Hit
GCGCTGGGGACTGCTCGAGACACAAGTGCTGCTGTAGTTAGCGCTTAGTGAC1480.13173119715175788No Hit
AACAAAGGGAACTTCTACCTCCCAGGTTCAAGCAGTTCTCCCTACCTCAGCC1470.13084112149532712No Hit
TAGGCAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG1460.1299510458388963No Hit
TCAGCAGGGAGAGTTTCTCAACCTTCAGATATTGAAATGAAGTGTTGATGAA1450.1290609701824655No Hit
CTTATTGGGGCCTACTTGGATGATTGTCACCGGAGGTATAGCTGTGCCCACT1450.1290609701824655No Hit
TACAAGGGGAACCACCAATGCGCTGGACTTGAATTCAGTGCTTGGGAAGGAT1430.1272808188696039No Hit
AACATGGGAGAAAAAATAATTTAAGAAAAACACTAAGCCATAGATATACTCT1410.12550066755674233No Hit
ATAGTTGGGGAGAAGGGAAACGTGAAGAAGGTGAAGATGGCGGTGGCCAGGG1410.12550066755674233No Hit
TGTTAAGGGAGGGCCCATTCAGTGTGTTTATGTTTTCTAAGGCTTAACCAAT1410.12550066755674233No Hit
GAAACTGGGATGCATTGTGTATTAAGAGAGTTTATATTTTAGTAAAATTTAA1410.12550066755674233No Hit
AAGCCAGGGATGTGCCTGATGTGGTGGAGGGAGACACCAGCAGGTGGCTGCA1400.12461059190031153No Hit
GCGGCACGGGATTATTTAAATTGTTCATCACAGTAGAAGTCATTATTTTTAA1400.12461059190031153No Hit
GTTAAGGGTCTCTTAGCGGGGTCACTGAGAAGTCAAGTAACTTCCTCTAAGG1390.12372051624388074No Hit
CTATCCGGGGACGCTCTTCCGATCTTTTACGGGGATGGATTTTAATTGTGTT1380.12283044058744993No Hit
TTCTTAGGGACCACCTCCTTACTTACCTGCCTGAAGAAATTCTGCCTTTGAC1370.12194036493101913No Hit
TTGATTGGGAAGAAAAAGATTTAATTGTTCCATGTGTATTTTATTTATGGTA1370.12194036493101913No Hit
TGTTTTGGGAGCAAACATTAAACAAAGCCCAATTCCTCATCAGATTTCTGTA1370.12194036493101913No Hit
GCGATAGGGACCCCCTCCAAAAGAAGCACTTTACTTATGTACTCACATATTT1360.12105028927458833No Hit
TATAGTGGGATCTACAGCCGGGACCTCGATGTCGGCTCGTCGCATCCTGGGG1360.12105028927458833No Hit
GTTGGGGGTTGAATGAATGATCCTTCATAATTACAATTTTTAATGCCTTTAC1360.12105028927458833No Hit
CTGCTTGAGGGAAGTAATCTGACACTAGGTGCCACATAATTAAGATAAAGAC1360.12105028927458833No Hit
ACAACTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1350.12016021361815755No Hit
GCGCCATGGGTCTCTAATTTTCCTGTCAGTTATATTTTGGTGGAGTCTGGGT1350.12016021361815755No Hit
TCCAATGGGTATCTCAATAGATGAAGAAAAATCATTTGACAAAATTCAATGT1340.11927013796172675No Hit
CATCTCGGGAGCCCAGTATATCAATGAATATAAAAATTTGAGAAGATATTTT1340.11927013796172675No Hit
TTTGCAGGGAACTTCCTACTGGGAATGACCCGTTCCTGCAGGGTCTCACCTT1340.11927013796172675No Hit
TACTAGGGGGATCTAGTGTTTGCTGTCATTAGTGACCAAGAAAAAGTAGTTC1340.11927013796172675No Hit
ATTACGGGGATTCCTCTCTGGGTTTCAAGTCGAGAGTATTTAAATTATAAAA1330.11838006230529595No Hit
ACATGTGGGCGGATTCTTGAGTGGATTAAATGAGTTAGTTTTGGTAAAGTTT1310.11659991099243436No Hit
CGTGCGGGGGGCCTCTAGAACTGTGAAAGAATAAACTTCGGTATTTGTAAGT1310.11659991099243436No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTTATACA1310.11659991099243436No Hit
GGGCCAGGGCACATTTTCTTTACTTTTTAGTCTGTTGATAGACATTTAGGTC1300.11570983533600356No Hit
ATTCCAGGGATACACCATAAATTAATCCCATTCATTCTAAAAACTTGTTCAT1300.11570983533600356No Hit
ATTGTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1300.11570983533600356No Hit
ATGTCAGGGATTTGAGGGCTTAATTGTGTATAGTAGAAATACTATTTTAGAC1300.11570983533600356No Hit
AGACTGGGGATGGTATACATCACTTTTGACCTTGTCTAAATATCTCAGGAGG1300.11570983533600356No Hit
CTCTGTGGGGCTCTTCCGATCTGTATGAGGGCAAGTATTTTCTTAAAGATAT1300.11570983533600356No Hit
AGTCGAGGGTGGCGGGGGACAGTAAACTTTAGACAATGCTACTTAATCATTT1300.11570983533600356No Hit
ACACCTGGGACCATGGAATGAAAAATATTGTTATACAATACATTGATCTGTC1300.11570983533600356No Hit
AGTAACGGGGATGATAGGAGTTGGCAGTTTTTTAATGCTTAAAGAGGAATTA1290.11481975967957278No Hit
TTTTGCGGGAAAAGAGGCATTAATCAGGATTGTAGTTCATCTCTCTTTTTAT1280.11392968402314198No Hit
TGCCGCGGGATCTAGTGACTTTTTAAAGCCCTAACGTTTACATAAAGAAGCT1280.11392968402314198No Hit
CACAATGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1280.11392968402314198No Hit
ATTACTGGGCCACTATGCACATTTTATTTCTCCAACATACTCGGATTCTACC1270.11303960836671118No Hit
CTGAGGGGGTGATACCACTTTCTTGAAATTAAGTCCCTCCTTAGTTTTTGCC1270.11303960836671118No Hit
GCATGGGGTGGCAGCAATTTTGTGTTTTTATTTTGGAGACGGCTAATGGTAG1260.11214953271028037No Hit
CTTCGTGGGAACCTTGACCTTTTTTCCCTCTGGTTTGAGAAAACTTTGGACA1260.11214953271028037No Hit
TGGCGTGGGGCTCATCCCCACAAGGTACTGGGTTATGGGCATGAGCCACCAT1240.11036938139741878No Hit
CAAAAAGGGAAGGTCTTCCTATACAATGAGTCAGAAGAGAAAAGCTGTAAAC1240.11036938139741878No Hit
TTACATGGGATGCAAAGAGAGGCATTGGTCCATATAGTAAAATTGTCCTTGC1240.11036938139741878No Hit
ATCAAGGGATCTGCCTTTGGGAGATGAAATAAAGACCAGAGAGAGAATAAAG1230.10947930574098798No Hit
CCATGTGGGGATTACAAATGTGGAAAATGTTATAATGTCATATTCTAGCATT1220.10858923008455719No Hit
GCTTTGGGATAAATCACTGATTTTATTTTCTACAGGTTATTTAGATGTTTGG1220.10858923008455719No Hit
GTCACTGGGATACTGGCTTTGCTGTAATGCTTGAAAAGGCGTTGGTATCTTC1220.10858923008455719No Hit
ATTTCCGGGGCTTCTTTTCCGACAAAACACCAAATGGCGGATGACGCCGGTG1220.10858923008455719No Hit
TGCGCAGGGAAGCTTACAAGGTGATCTGAGAGCTGACCCCTGCAGACCTCAC1220.10858923008455719No Hit
AAAAATGGGATAGGTCTAGATTTGTTATCAAATCACTTCCTGGAAAACAGAC1220.10858923008455719No Hit
GTGAGTGGGATCTAGTGATGGGGTGTGGAGTCACAATTACTGACCCCAAGTC1210.1076991544281264No Hit
AGTACTGGGATTATTGAAGCTTTGTAATATAATTTGAAATCAGAGAGAATAA1200.1068090787716956No Hit
GTAACTGGGAGGGGAGCCAACGTTCCTTGTAAAGTGTGTAGATTTTTTGTTT1200.1068090787716956No Hit
GTCACAGGGATTTAATTAAATTTTAGTAAATCTTATTGAGTAATACAGTTGT1200.1068090787716956No Hit
ACTAATGGGAGACCAACTCCAAATTACAAAGTTTTCCAGAGCTTATATACCT1190.1059190031152648No Hit
TCTTATGGGGTTCCGGCTCCGCGCGCCTGCCAGGCCGGGGCCGGCGGCGGAA1190.1059190031152648No Hit
TTACCGGGAGTTGCTTCATAGGCATTCATGACATTTTAGTGCTTTCACAACT1190.1059190031152648No Hit
AGAGTGGGTACTGATTTGACAGCAGTATGTATTCAACATTTAAGACTTTCTG1190.1059190031152648No Hit
TTTACGGGAGAACAAGCCATCGTCATCGTAGGAGACGACAGCTCTGTGCCGG1190.1059190031152648No Hit
ACGATGGGGGCACTGTTGGGAACTATTAAAACAGCTAACTATAAACTAGTTA1190.1059190031152648No Hit
CTGAAAGGGATTTTCAGAAGTTTCGGCTGATGGAGAAAAGAGAGTCCTTAAT1180.10502892745883399No Hit
TTTCGCGGGATCTCTTAAACAGCTTGATTTTAGCATCATGACTTTCCTCTGG1180.10502892745883399No Hit
GCGCTGGGTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGG1180.10502892745883399No Hit
CATCTAAGGACGTATCCTATATTTTGAATTTTATACTAGTTTTTCAAAAGTA1180.10502892745883399No Hit
AAAGAGGGGAAGATGTATATTATAACCATAGAATAATCACTAAAAAGTACAG1180.10502892745883399No Hit
CTAGAGGGGTCATTATCTTCATGGCTTTATTATCTACAATAACTTTTAAATT1170.10413885180240319No Hit
CCAGACAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1170.10413885180240319No Hit
GAAACAGGGATACTTGGTTGATTTAGGTTGCACATTCACTGAATTCACTGAG1170.10413885180240319No Hit
AATTCCGGGTGGCCATGTAGCCTAGGTTTTTTAAAAAAAATGAAGGTCAGTA1170.10413885180240319No Hit
AAATATGGGATTAAATATAATAAACAGTAAACGTTGAGGTTCATCAATAAAA1170.10413885180240319No Hit
TCGCATGGGCTCCTAAAAGACTTGCGGAATCACTCTGTCCTTGGAAGTTTCA1160.10324877614597242No Hit
GGTCGGGAGAAGCAATGGACGAACCAGTCCTCACATCTTCTCCCGCCATAGT1150.10235870048954161No Hit
TGTAGCGGGGGATCGTGGTGGTCCCGGTGGAATGTTCAGAGGTGGCCGTGGT1150.10235870048954161No Hit
AGTTTAGGGAGACAGTGTGCTGTTTGAATTGACTATTTGCACTCAAAGTCTG1150.10235870048954161No Hit
CGGTAGGGAGATTATTTCTGTAGTTATATTTCTCCACTCTTTCTCGAATTTT1150.10235870048954161No Hit
CTGAGCGGGATCAGCGAGCGATTTGGCCTACTTCCTCATTGGCTTCTATTCT1150.10235870048954161No Hit
CAAAAAGGGGGTGGAGATGATGGCCGATATGTACAACAGAATGACCAGTGCC1130.10057854917668002No Hit
AACCAAAGGGGAAACATTTTGTAGTAATAATAATCAATTTTCAGCTGATAAA1130.10057854917668002No Hit
GCAATGGGACTTGGATACCACCCAGCAGATGATTGCTAATTCCTTGAAGGAC1130.10057854917668002No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTTTCCGAAATCTGTCTCTT1130.10057854917668002No Hit
AGAATAGGGCATTCTTGCATCCCAGGAATGAATCCTACTTGGTCATGATGGG1130.10057854917668002No Hit
CGTAGCGGGGATCTGGTTCTGGGATTGAATACATTAGCCATTGATAATCTAC1130.10057854917668002No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)