FastQCFastQC Report
Sat 31 Dec 2022
SRR5846077.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5846077.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73300
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGGCAGACTATCTCGTATGCCGTCT10031.3683492496589358No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAGACTATCTCGTATGC9781.334242837653479No Hit
TGGCATGGGTACAGTCGGGCTCACTTAAACCTATGGAATCAGAAACTCTGGG2620.35743519781718963No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAGACT1470.20054570259208732No Hit
AAGCTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1460.19918144611186903No Hit
AATAATGGGATTAGCGCTCATCTTCATCATGGGCAACAGCGCCAAGGAAGCT1400.19099590723055934No Hit
AAATATGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC1320.1800818553888131No Hit
ATCCAAGGGATACCGGGCCCTACAGGATGCTGAGTGGCATCCCTGGCCTTCA1320.1800818553888131No Hit
GCTTAAGGGTTATCGAGCATCTAGCATGTTCCAGACACAATCTGAACACTGA1280.17462482946793997No Hit
AGTCGCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1250.17053206002728513No Hit
GCTAAAGGGGCCCGAGCCAGTGTGCTGAGCTCTCCGCGTCGCCTCTGTCGCC1250.17053206002728513No Hit
CTTATACACATCTCCGAGCCCACGAGACGGCAGACTATCTCGTATGCCTGTC1250.17053206002728513No Hit
GATGCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1240.16916780354706687No Hit
ATAGTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1240.16916780354706687No Hit
CCTGAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1230.16780354706684858No Hit
TCCATCAGGGGTACAATAGGTAATCAATAATTGGCCTCTTGGGACTGACTGT1220.16643929058663026No Hit
GCTTGAGGGTTACTAAGCATGTGCCGTCGTAGGTATTAGTGCTAGTCTCAAA1210.165075034106412No Hit
GCTAATGGGGTCCCACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCTGTCGAG1210.165075034106412No Hit
TGCAAAGGGAAGGCTTGGAGACCTTCCAGTATCTCATGCCTTATTCTAGATC1190.16234652114597545No Hit
AAAAAAGGGGCCCGCGGGGCCGGGTGCGATGGCGGCGGTGGCTGCGTTGCAG1180.16098226466575716No Hit
TCATTTGGGTCACTGAGAATATATTATTGGTATGAGACATTATTAAAATATG1180.16098226466575716No Hit
TTCTGTGGGCCTGGGCTTATGGCCGGTCACAGCCTCAGTGTGACTCCACAGT1170.15961800818553887No Hit
GGCTTTGGGGACGGTTAAGAATGTCAGTATACAAGAAGGAATAGAAAACTGA1160.1582537517053206No Hit
ATACTAGGGTTACTGTTATCATGCAGTTCTGTCTCATAAAGAAATGGTAGGA1160.1582537517053206No Hit
TACAGGGGGAGTCCAACATGGCGGCGCCCAGCGGAGGGTGGAACGGCGTCGG1140.15552523874488405No Hit
CATATTGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC1140.15552523874488405No Hit
CAAAATGGGATCTTTCTCTACTGTAAAGTGATTTTGTTTGCAGGTAAGAAAA1110.1514324693042292No Hit
ACGTACGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1110.1514324693042292No Hit
GGTGTTGGGTGGAATAAAATAGAAATTACAGTTTGATAGGAATCCTAGAATC1110.1514324693042292No Hit
TGCGCGGGTGGCACGGGACCAAAAGGGAAGGTAAAAGAAAGCAAAGAAGACA1110.1514324693042292No Hit
GTGCTATGGAGAGACTTTTATCTCTAAAATGAATTCCCTATACACATATGGA1100.15006821282401092No Hit
GACACAGGGGAGGGCGGGCGCGGGGTCTTGGCGAACGGTCTTCGGAAGCGGC1100.15006821282401092No Hit
GTAGACGGGGAATTAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGT1100.15006821282401092No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAGACTA1090.14870395634379263No Hit
TCATCTGGGGGAGGAAGCACTAAAGATGGAAAGGAAAAACCAGTACCAGCCA1090.14870395634379263No Hit
CTGCACGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1090.14870395634379263No Hit
GTTTCTGGGACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCT1070.14597544338335605No Hit
ACGACAGGACCCAGATTCCAAGGACCTCACGATGGTGCTGAAAACCTATGAC1060.1446111869031378No Hit
TTCTCCGGGAGCCACAGGCGGACCTGCAGGCTCTGCTGCAGAGCGGTGCCCA1060.1446111869031378No Hit
CCATGTGGGATGGGAGTGGACATCCGCCATAACAAGGACCGAAAGGTTCGGC1050.1432469304229195No Hit
GCGCACGGGAAGTGTTTGATTTATTGAAGGTGTATGCATATCCCAAGGCATG1040.1418826739427012No Hit
CATAATGGGAGCTAGATTCAAATGGGCTGATAACCAAATTTTAACACATCAG1030.14051841746248295No Hit
CGTCACGGGCTTTGCTCTTGTGGTAATAATTAAAAAATGGTCCATCCCTTGT1020.13915416098226466No Hit
GGTTTTGGGAACCTTGTCAGATGTTAACTTCTAAGTTCGGTTTGGGATTTTT1010.1377899045020464No Hit
ATCGCCGGGATCGCAGCCTGCGAGGAGATGTTACGGCAGCTGGGCCGCCGGC1010.1377899045020464No Hit
CGTGTTGGGCTTCTATATATTTCCAGCTTAAATTCCTCTTCCGAGCTCCAAA1010.1377899045020464No Hit
GTCAATGGGACATAGTGAGTAGGGAAAATTGAGATAATGAAGAATAATGACT1010.1377899045020464No Hit
CAACTGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1010.1377899045020464No Hit
TAAGGTAGGGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTAC1010.1377899045020464No Hit
CTTGGTGGGGTGCACTTCTATGACATGGAAATTATTGAAGAAGAAGCTTTCT1000.1364256480218281No Hit
CGAGTTGGGACAAAAACACTGGCACTTGAATGTTGAATGTCACCGTATGCGT980.13369713506139155No Hit
CCAGATGGGGAAGGTGTGGGGTCTTTCCCAACCTGAGGATTTCTGAAAGGTT970.13233287858117326No Hit
ACAAACGGGAGGTAATAGAAAATATACACAAGTCAGAATGTGAAATTAAATA970.13233287858117326No Hit
CATACTGGGAACCACAGGTCTACAAGAGCGTTTTTAGTAAAGTGCCTGTGTT960.13096862210095497No Hit
AAGTATGGGGGTCTGTTCCATGTGACTTTACTCCATAAAGTGATTATAGGAC950.1296043656207367No Hit
CCAAGCGGGATTGTGGCGGGCGTGTTCATTTTCAGTGCTGTGCAGATGACGC950.1296043656207367No Hit
CAGCTAGGGATAATAGGAGCAGTAGCTTGAGACCCGAAGTCAGGAAACTTTG950.1296043656207367No Hit
ATATAAGGGGGTTACTACATCTTCCGTGGGGCGAATTCCCAGAAAAACACTT940.12824010914051842No Hit
AGGCCAGGCTGGTCTCAGACTCCTGATCTCGGGTGATCTGCCCACCTCGGCC930.12687585266030013No Hit
ATTCAGGGGGAAGAAGGAAACAGTAGAGAGTAAGCAACTGAATGCAATGGGA920.12551159618008184No Hit
AATGTTGGGCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGT920.12551159618008184No Hit
GATTTGGGGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAA920.12551159618008184No Hit
TTAGTAGGGATAGCGATCTCCCAGAAACTTGGACTGGAATGCTCCTACACTG920.12551159618008184No Hit
GTGGTTGGGCGATCTGTTCCTGGGCCACCTCAATGATATTTCTCTGAGAACA910.12414733969986357No Hit
ACCTCCGGGAATTCCCCTCTCTGGGAGCTACCCAGGGTCTTCTGTTGGCAGC900.12278308321964529No Hit
ATTGTAGGGCTATGCACATTTTATTTCTCCAACATACTCGGATTCTACCCTA890.12141882673942701No Hit
TAAGAGGGGTCTCTTGGGAAGCAGTTTCAGATAAATCATGGGCATTGCTGGA880.12005457025920872No Hit
TTTGTAGGGGGGGGATGTGATGCTATCTGCAGGTAGATAATGACTGAGTTGA880.12005457025920872No Hit
AACGCTGGGATGAGCTATGTTGCATAAGTTGATGGACTTCATTAATCAAATC880.12005457025920872No Hit
CGGTGGGAAGGGTGTTGGTAAATGGGTCCTCTCATAGTCTCTTTGTGAGAGT880.12005457025920872No Hit
TAGTGAGGGCAGACAATGTACCCAAGTGTGATGAGATTCTGATGGAAGAGAT870.11869031377899045No Hit
GAACTAGGGAGGTTTGTAGACTGGAAGAACTAGGCTATACCATAGAGCCTAG870.11869031377899045No Hit
ACAGAAGGGTGCCAGGTGACATGCTAGGAGCTTCATATATCCCATTTCATTC870.11869031377899045No Hit
ACGTATGGGATAGATTCCATTAGGAAAAGCAGAATGTTTGTGATCCTGTTCA870.11869031377899045No Hit
TTGTACGGGCGATCTACAGCCGGGTAGTGCACACTCTAAAATACTCTTTTCT860.11732605729877217No Hit
CGGACGGGGGTTTCTCCAAATAACTAAGATCTAATAAAGAAACAAATCTTAA860.11732605729877217No Hit
ATGTTGGTTTACCTGTAGTGTTTTATAAAGTGTGGTCAGAGGCCCCTATAGA850.1159618008185539No Hit
TGAGAACGGGGATTACAGCTACCTTCTAGCTTTAGTATGGTAGTGCTTCATT850.1159618008185539No Hit
GATTACGGGAGGCCCCTATAGAATGTATTGTTTGAAAGTGTAGTGATATATT850.1159618008185539No Hit
TTCTTTGGGTCTGTCAGCTACCACCCTGTGCTTTAAAAATGCACACACTCAA840.1145975443383356No Hit
TATGTAGGGACCACTGGTTAAATATTTTAATTTCACTTTAGCCATGTTTGAA840.1145975443383356No Hit
ATGTACGGGACCTGCAAATGGCGCTTCCAGTACTGTGTTCAGTGATCCACAT840.1145975443383356No Hit
ATCTTCGGGGTGCTTACATCACGAGAAAAAGCAGCCAAGGATTATAACCAGA840.1145975443383356No Hit
CTACTTCGGGGAATTGTCAAAAACCAGAATTAGGTCAAGTTCATAGTTTCTG830.11323328785811733No Hit
TTCGTGGGGGTGTAACCTGATGTCTCAACCCCCTGTGAGAAGAGTCCATTAT830.11323328785811733No Hit
AAACAAGGGCCTATAGTATATTTTGAGTTAAGTTTTATGGTGTGAAGTAAGG820.11186903137789905No Hit
GCGACAGGGAATGATGGCGCGATGTAACACGAGAAAGCACATACCAAGGCCA820.11186903137789905No Hit
TCACCCGGGAGGGAGGGAGAGTCCCGATTTTCCAGGTACCATCTGTCACGGC820.11186903137789905No Hit
GCTATAGGGCTGTATAATCTGCAGCATGCTATAGAAAGTGGGGAGGAAGGGA820.11186903137789905No Hit
GGCTCCGGTCTCACAGGCATAAGACACAAATTATATATTGTTATGAAGCACT810.11050477489768078No Hit
TGCAATGGGTATCAGAGGTGCTTCAAGGAAAACTAGGAATCTATGATGCTGA810.11050477489768078No Hit
ATCGCCAGGGTGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC810.11050477489768078No Hit
TTGAATGGGGAACCTTTGTGCCCTATCACCCAACGCTCCAAAGTCATAATTG810.11050477489768078No Hit
GCCAGTGGGATCACTCTAGAAGAATCTGTACATCATCAGGACTGCATTGCTC810.11050477489768078No Hit
CTCGCAGGGATCCTGCGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACAG800.10914051841746249No Hit
CCGACTGGGCCGAAGATCATGCAGAGAAGGCATCTGTGGCTCTTGTGCAATG800.10914051841746249No Hit
CTAGTTGGGGGTGGAGAGAGCGCGGAGACAAGCGCAGAGCGCAGCGCACGGC800.10914051841746249No Hit
GTATGTGGGATGTTTAGAATCATTTGTACTTCTTTTTTGTTCTGTCCATTTA800.10914051841746249No Hit
GACTGAGGGATTGTAGATAACATATCTTTTCTATAATTTGTAAGTCAATAAT790.10777626193724421No Hit
TACTAGGGGGGGGGGCAAAATAGACATACAATAGGAAAAATAATAATAAAGA790.10777626193724421No Hit
TTAACATGGAGAAAAAAAATCAAGATTTTCTAAACTAATTCTGACTGTAAAC790.10777626193724421No Hit
GTCTGCGGGGTTGCATGTATTGTGATTTTGTTTGATCATTTGTGTGCATTTC790.10777626193724421No Hit
CGTGAAGGGCGAGGGGGGATTTCCACAATGTCTGTGAACTGGACCTGGTGTT790.10777626193724421No Hit
AGACAGGGCTCCTCATACTAGGCCTACTAACCAACACACTAACCATATACCA790.10777626193724421No Hit
TTTTTAGGGATACATGAGTGCATGCACCTATCAATGTGTTTTCTTCCCAACA780.10641200545702591No Hit
CTCCTTGGGGAGAATTCAATTTTAGATGGTCTCCAGAGCAGAATTTGATGTA780.10641200545702591No Hit
GGTAGTGGGGTTTACATGTATATTATGTCTCCCCAGTTTATCTGAAAATTCT780.10641200545702591No Hit
GTAATAGGGGGGAGAGAGCGCGGAGACAAGCGCAGAGCGCAGCGCACGGCCA770.10504774897680763No Hit
ATCGTAGGGATCACCATAGAGGATGTTTCAGATGTGGCAATTCCTTTAAATC770.10504774897680763No Hit
TGAATGGGGGGCACCTGAGGTCCATAAGCGTGAAAAGAGGCAGGAAGAGAAG770.10504774897680763No Hit
TGTCTTGGGCGACTTCAGCGAGAGGATCAAACAGCTGCAGAACATCTCACTG770.10504774897680763No Hit
TTTTGGGGGCTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGGTG760.10368349249658936No Hit
GCATTAGGGTGCCTGGCACAGCCACTTCTCTGGTCTTTCCACTGTCGGTTCC750.10231923601637108No Hit
CTAGTTGGGGGGGCGGGCTTCATAGAGACTTGGGAATGAGCTGAAGGTGAAA750.10231923601637108No Hit
TAAATAGGGATCGCCAGAAGCAGTGAAGAAGGAGGCAGAGTTGGACAAGTAC750.10231923601637108No Hit
ATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAGACTATCTCGT740.10095497953615279No Hit
ACTTTAGGGGGCTGTGGAGAGAGCGCGGAGACAAGCGCAGAGCGCAGCGCAC740.10095497953615279No Hit
CTTTAAGGGAGTGACAGTGATATGATGCTGAACATCATCAACAGCTCTATTA740.10095497953615279No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)