FastQCFastQC Report
Sat 31 Dec 2022
SRR5846076.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5846076.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73605
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAGACTATCTCGTATGC10041.36403776917329No Hit
CTTATACACATCTCCGAGCCCACGAGACGGCAGACTATCTCGTATGCCGTCT9261.2580667074247673No Hit
TGGCATGGGTACAGTCGGGCTCACTTAAACCTATGGAATCAGAAACTCTGGG2630.3573126825623259No Hit
CTTATACACATCTCCGAGCCCACGAGACGGCAGACTATCTCGTATGCCTGTC1480.2010732966510427No Hit
GTCAATGGGACATAGTGAGTAGGGAAAATTGAGATAATGAAGAATAATGACT1470.19971469329529246No Hit
ATCCAAGGGATACCGGGCCCTACAGGATGCTGAGTGGCATCCCTGGCCTTCA1420.192921676516541No Hit
AATAATGGGATTAGCGCTCATCTTCATCATGGGCAACAGCGCCAAGGAAGCT1390.18884586644929013No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAGACT1370.18612865973778955No Hit
TACAGGGGGAGTCCAACATGGCGGCGCCCAGCGGAGGGTGGAACGGCGTCGG1330.1806942463147884No Hit
CTGCACGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1310.1779770396032878No Hit
AGTCGCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1290.17525983289178726No Hit
AAGCTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1290.17525983289178726No Hit
TCCATCAGGGGTACAATAGGTAATCAATAATTGGCCTCTTGGGACTGACTGT1290.17525983289178726No Hit
ATACTAGGGTTACTGTTATCATGCAGTTCTGTCTCATAAAGAAATGGTAGGA1290.17525983289178726No Hit
GCTTAAGGGTTATCGAGCATCTAGCATGTTCCAGACACAATCTGAACACTGA1250.16982541946878607No Hit
GCTTGAGGGTTACTAAGCATGTGCCGTCGTAGGTATTAGTGCTAGTCTCAAA1240.1684668161130358No Hit
AAATATGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC1210.16439100604578494No Hit
GCTAATGGGGTCCCACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCTGTCGAG1210.16439100604578494No Hit
TCATTTGGGTCACTGAGAATATATTATTGGTATGAGACATTATTAAAATATG1180.16031519597853408No Hit
ACAAACGGGAGGTAATAGAAAATATACACAAGTCAGAATGTGAAATTAAATA1180.16031519597853408No Hit
ACGACAGGACCCAGATTCCAAGGACCTCACGATGGTGCTGAAAACCTATGAC1180.16031519597853408No Hit
CATATTGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC1170.15895659262278378No Hit
GACACAGGGGAGGGCGGGCGCGGGGTCTTGGCGAACGGTCTTCGGAAGCGGC1170.15895659262278378No Hit
CCGACTGGGCCGAAGATCATGCAGAGAAGGCATCTGTGGCTCTTGTGCAATG1150.1562393859112832No Hit
TCATCTGGGGGAGGAAGCACTAAAGATGGAAAGGAAAAACCAGTACCAGCCA1130.15352217919978262No Hit
CAAAATGGGATCTTTCTCTACTGTAAAGTGATTTTGTTTGCAGGTAAGAAAA1120.15216357584403234No Hit
AAAAAAGGGGCCCGCGGGGCCGGGTGCGATGGCGGCGGTGGCTGCGTTGCAG1110.15080497248828204No Hit
AAGTATGGGGGTCTGTTCCATGTGACTTTACTCCATAAAGTGATTATAGGAC1110.15080497248828204No Hit
TGCAAAGGGAAGGCTTGGAGACCTTCCAGTATCTCATGCCTTATTCTAGATC1110.15080497248828204No Hit
ATAGTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1110.15080497248828204No Hit
AGGCCAGGCTGGTCTCAGACTCCTGATCTCGGGTGATCTGCCCACCTCGGCC1100.14944636913253176No Hit
ACGTACGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1080.14672916242103118No Hit
CGTGTTGGGCTTCTATATATTTCCAGCTTAAATTCCTCTTCCGAGCTCCAAA1080.14672916242103118No Hit
GCTAAAGGGGCCCGAGCCAGTGTGCTGAGCTCTCCGCGTCGCCTCTGTCGCC1060.1440119557095306No Hit
CTTGGTGGGGTGCACTTCTATGACATGGAAATTATTGAAGAAGAAGCTTTCT1060.1440119557095306No Hit
CAACTGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1060.1440119557095306No Hit
AACCATGGGCTTGGTTAACTTTTAGGGGAAGGAGAAAGGATTTCAGCAGGTT1050.14265335235378032No Hit
TTCTGTGGGCCTGGGCTTATGGCCGGTCACAGCCTCAGTGTGACTCCACAGT1050.14265335235378032No Hit
ATTCAGGGGGAAGAAGGAAACAGTAGAGAGTAAGCAACTGAATGCAATGGGA1040.14129474899803002No Hit
TTCTCCGGGAGCCACAGGCGGACCTGCAGGCTCTGCTGCAGAGCGGTGCCCA1040.14129474899803002No Hit
ACTTTAGGGGGCTGTGGAGAGAGCGCGGAGACAAGCGCAGAGCGCAGCGCAC1030.13993614564227974No Hit
GATGCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1030.13993614564227974No Hit
GGTGTTGGGTGGAATAAAATAGAAATTACAGTTTGATAGGAATCCTAGAATC1030.13993614564227974No Hit
AACGCTGGGATGAGCTATGTTGCATAAGTTGATGGACTTCATTAATCAAATC1020.13857754228652946No Hit
TTTTGGGGGCTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGGTG1010.13721893893077916No Hit
TTAGTAGGGATAGCGATCTCCCAGAAACTTGGACTGGAATGCTCCTACACTG1010.13721893893077916No Hit
ACAGAAGGGTGCCAGGTGACATGCTAGGAGCTTCATATATCCCATTTCATTC1000.13586033557502888No Hit
CCATGTGGGATGGGAGTGGACATCCGCCATAACAAGGACCGAAAGGTTCGGC990.13450173221927858No Hit
GGCTCCGGTCTCACAGGCATAAGACACAAATTATATATTGTTATGAAGCACT990.13450173221927858No Hit
CCAGATGGGGAAGGTGTGGGGTCTTTCCCAACCTGAGGATTTCTGAAAGGTT990.13450173221927858No Hit
CCAAGCGGGATTGTGGCGGGCGTGTTCATTTTCAGTGCTGTGCAGATGACGC990.13450173221927858No Hit
ACGTATGGGATAGATTCCATTAGGAAAAGCAGAATGTTTGTGATCCTGTTCA990.13450173221927858No Hit
TTTGTAGGGGGGGGATGTGATGCTATCTGCAGGTAGATAATGACTGAGTTGA990.13450173221927858No Hit
TACTAGGGGGGGGGGCAAAATAGACATACAATAGGAAAAATAATAATAAAGA980.13314312886352828No Hit
ATCGCCGGGATCGCAGCCTGCGAGGAGATGTTACGGCAGCTGGGCCGCCGGC980.13314312886352828No Hit
TTGTACGGGCGATCTACAGCCGGGTAGTGCACACTCTAAAATACTCTTTTCT970.131784525507778No Hit
ATGTAAGGGGAGGCCGCCTGTGGCCACCATGTCGGCCCTCTTTCCACCACCC970.131784525507778No Hit
CATACTGGGAACCACAGGTCTACAAGAGCGTTTTTAGTAAAGTGCCTGTGTT970.131784525507778No Hit
GCATTAGGGTGCCTGGCACAGCCACTTCTCTGGTCTTTCCACTGTCGGTTCC950.12906731879627742No Hit
CGAGTTGGGACAAAAACACTGGCACTTGAATGTTGAATGTCACCGTATGCGT950.12906731879627742No Hit
GGCTTTGGGGACGGTTAAGAATGTCAGTATACAAGAAGGAATAGAAAACTGA950.12906731879627742No Hit
GTGCTATGGAGAGACTTTTATCTCTAAAATGAATTCCCTATACACATATGGA940.12770871544052714No Hit
GTTATAGGGGAGAGCAAAATAACACAACATTGTTGTACACGGTTGAACACTT940.12770871544052714No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAGACTA940.12770871544052714No Hit
TTCTTTGGGTCTGTCAGCTACCACCCTGTGCTTTAAAAATGCACACACTCAA940.12770871544052714No Hit
GATTTGGGGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAA940.12770871544052714No Hit
TAAAAAGGGAAGCTGCAGAGTTCAGACTTAGGAGTAAAACAGAAAAGTGAAC940.12770871544052714No Hit
GCCAGTGGGATCACTCTAGAAGAATCTGTACATCATCAGGACTGCATTGCTC930.12635011208477684No Hit
AAGTCTGGGGACGCTCTTCCGATCTGCCTAAGGGCAGATGACTACGTAGGAA930.12635011208477684No Hit
TGAGGCGGGAAGAAATAAAAGACATACAAATTGTAAAGAAAGAGGTCAGACT930.12635011208477684No Hit
CTCGCAGGGATCCTGCGGTGGCTGGCGTGCTGGGCATGGGGCCTGCTCACAG920.12499150872902656No Hit
CGAACCGGGCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTG920.12499150872902656No Hit
TGAATGGGGGGCACCTGAGGTCCATAAGCGTGAAAAGAGGCAGGAAGAGAAG920.12499150872902656No Hit
TAGTGAGGGCAGACAATGTACCCAAGTGTGATGAGATTCTGATGGAAGAGAT920.12499150872902656No Hit
CCTGAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA920.12499150872902656No Hit
GGTTTTGGGAACCTTGTCAGATGTTAACTTCTAAGTTCGGTTTGGGATTTTT910.12363290537327629No Hit
ATTGTAGGGCTATGCACATTTTATTTCTCCAACATACTCGGATTCTACCCTA910.12363290537327629No Hit
CGGTGGGAAGGGTGTTGGTAAATGGGTCCTCTCATAGTCTCTTTGTGAGAGT910.12363290537327629No Hit
TGCAGCGGGACCCTTCCACATCTACCTTCCAAAGACCATCGTTTTCTCTGCT900.12227430201752598No Hit
AACCGGGGATGTTATTTATTCAGATCCTTTTTTTCCAGAAAGAAAAATTGTC900.12227430201752598No Hit
TCATTTGGGCTTTCAAAACTGTGCTGAATTCAATGAGCCTGATTCAGAAGTA900.12227430201752598No Hit
ACCTCCGGGAATTCCCCTCTCTGGGAGCTACCCAGGGTCTTCTGTTGGCAGC900.12227430201752598No Hit
GTAGACGGGGAATTAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGT900.12227430201752598No Hit
GATTACGGGAGGCCCCTATAGAATGTATTGTTTGAAAGTGTAGTGATATATT890.12091569866177569No Hit
CATAATGGGAGCTAGATTCAAATGGGCTGATAACCAAATTTTAACACATCAG880.11955709530602542No Hit
TCGATAGGGACAGACGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCT880.11955709530602542No Hit
GTTTCTGGGACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCT880.11955709530602542No Hit
TTTCTTGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC880.11955709530602542No Hit
ATCTTCGGGGTGCTTACATCACGAGAAAAAGCAGCCAAGGATTATAACCAGA880.11955709530602542No Hit
AGCTTAGGGTGACTTCCTAACCACTTTGGAATCCATATACTTTTTAAAAATA880.11955709530602542No Hit
TGTCTTGGGCGACTTCAGCGAGAGGATCAAACAGCTGCAGAACATCTCACTG870.11819849195027511No Hit
TTTTGGGGGAGCAGAAGCCTCATTCCAGAACCCATCTGGCCAGAGAAGCAGC860.11683988859452483No Hit
AGACAGGGCTCCTCATACTAGGCCTACTAACCAACACACTAACCATATACCA860.11683988859452483No Hit
TGCGCTCGGGGCATGCATCTATACCTTATGTTACTAAATCAAAGTGACCAGT860.11683988859452483No Hit
TGCTGCGGGAATTGAGGTTTTATCTGAGGGGATGGAGATGATGAAATGGTTC860.11683988859452483No Hit
ATGTTGGTTTACCTGTAGTGTTTTATAAAGTGTGGTCAGAGGCCCCTATAGA850.11548128523877453No Hit
GGTAACGGGTATTAACATTGAACACTGCTGCGATTGCTCAAGGACATTTTAT850.11548128523877453No Hit
CTAGTTGGGGGTGGAGAGAGCGCGGAGACAAGCGCAGAGCGCAGCGCACGGC850.11548128523877453No Hit
CTAGTTGTGGGATGAGGCCATTATGGTTCCCATCTGACTTAACAACATAATT840.11412268188302425No Hit
TAGGAAGGGCTTTCAAAGGAATTGCCTTTTACAGATTTTTTTTTTATTCCCT830.11276407852727396No Hit
CGTCACGGGCTTTGCTCTTGTGGTAATAATTAAAAAATGGTCCATCCCTTGT830.11276407852727396No Hit
TTTTTAGGGATACATGAGTGCATGCACCTATCAATGTGTTTTCTTCCCAACA820.11140547517152366No Hit
TAAGAGGGGTCTCTTGGGAAGCAGTTTCAGATAAATCATGGGCATTGCTGGA820.11140547517152366No Hit
TATTAGGGGCTCTCCAAACATGAAAGTTAGCACATCTATTAAAAAGCAAATC820.11140547517152366No Hit
GGCTTAGGGAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCCCCAAA810.11004687181577338No Hit
ACGCCGGGGGTGGAGAGAGCGCGGAAACAAGCGCAGAGCGCAGCGCACGGCC810.11004687181577338No Hit
ATATAAGGGGGTTACTACATCTTCCGTGGGGCGAATTCCCAGAAAAACACTT810.11004687181577338No Hit
AAACAAGGGCCTATAGTATATTTTGAGTTAAGTTTTATGGTGTGAAGTAAGG810.11004687181577338No Hit
CCACCTGGGCAGACCCACCTCTAAGAGAACTTTCTGAATTTGCAGCTAATCT810.11004687181577338No Hit
TGATGAGGGGTGTTGAGCAGGAGCGGATTCTAGTACGGCAGCTCAGAGCTTC800.10868826846002311No Hit
CTCCTTGGGGAGAATTCAATTTTAGATGGTCTCCAGAGCAGAATTTGATGTA800.10868826846002311No Hit
GTACAGGGGGACCAAGATCTTTGAGGCCTACTGGTTCCTGGGCCAGGCAGGC800.10868826846002311No Hit
ATGTACGGGACCTGCAAATGGCGCTTCCAGTACTGTGTTCAGTGATCCACAT800.10868826846002311No Hit
ACGAGAGGGGGGGGCCGGCAGGTGCTCCGCAGCCGTCTGTGCCACCCAGAGC800.10868826846002311No Hit
GTAATAGGGGGGAGAGAGCGCGGAGACAAGCGCAGAGCGCAGCGCACGGCCA790.1073296651042728No Hit
TCATTAGGGGTAGACATCCGAGGTCATTTGTTGCGTTGAATTATCTGACCAT790.1073296651042728No Hit
CAACCCGGGACATGTTCCAGTAAGTTTAGCAACTTAGAGCCAAGACTGGTGG790.1073296651042728No Hit
GTATAAGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA790.1073296651042728No Hit
CTTCTAGGGCTCGTTTTCATTTTCTTAGATGACTTCTTGTCTGAGACAGAAA790.1073296651042728No Hit
CGGACGGGGGTTTCTCCAAATAACTAAGATCTAATAAAGAAACAAATCTTAA790.1073296651042728No Hit
TTCGTGGGGGTGTAACCTGATGTCTCAACCCCCTGTGAGAAGAGTCCATTAT790.1073296651042728No Hit
TTGGCAGGGAGCAGAGTATTCCCACTGGCTTAAAACTTAGGCGCTGATGCTC790.1073296651042728No Hit
ACATGGGGGAGTCGATTTATATACTGACTTTTATTAACTATGACAGATGTAT790.1073296651042728No Hit
GAAAAAGGGGGGAAACTTGGATGCCCAGCCATTTTGGTGACCTGAGAGTCTA780.10597106174852253No Hit
TGAGAACGGGGATTACAGCTACCTTCTAGCTTTAGTATGGTAGTGCTTCATT780.10597106174852253No Hit
CTGTAAGGGACCAGCAGGAATGCAGCGGATTCCTCTGTCCCAAGTGCTCCCA780.10597106174852253No Hit
TCCGGGGGCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGAC780.10597106174852253No Hit
GCGCACGGGAAGTGTTTGATTTATTGAAGGTGTATGCATATCCCAAGGCATG780.10597106174852253No Hit
CTAGTTGGGGGGGCGGGCTTCATAGAGACTTGGGAATGAGCTGAAGGTGAAA780.10597106174852253No Hit
TGCGCGGGTGGCACGGGACCAAAAGGGAAGGTAAAAGAAAGCAAAGAAGACA780.10597106174852253No Hit
TAAGGTAGGGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTAC780.10597106174852253No Hit
TGACCATGGGACCCATTACTGGATATATAACCCAAAGGATTATGAATCATTC780.10597106174852253No Hit
GTATAGGGGTCTTTGCTATAGGCACAAGGATGCATATACACAGATGTTCACT770.10461245839277222No Hit
ATCGCCGGGGTATCATTTGGAATATCTATCTTCCTTCCTTTTCTTCCTATTT770.10461245839277222No Hit
TGCAATGGGTATCAGAGGTGCTTCAAGGAAAACTAGGAATCTATGATGCTGA760.10325385503702195No Hit
GTGGTTGGGCGATCTGTTCCTGGGCCACCTCAATGATATTTCTCTGAGAACA760.10325385503702195No Hit
GTCGCGGGGTATCTCACTGTGGTTTTGATTTACATTCTTGTAATGACTAATG760.10325385503702195No Hit
GTGTGTGGGGAAGTCACACTATTGGGAAACCTGTGCTTCCCTCTCCATGGCT760.10325385503702195No Hit
TGCATAGGGGGGCAGCCTGGGGCATCTATATTACCGGCTCCTCCATCATTGG750.10189525168127166No Hit
CCACCCCAGACCTCCTGAATCAGACACTCTGGGTGTGGGGCCCAGTGTTCTG750.10189525168127166No Hit
GCTAAGGGGTCCGTGCAGGATGGCATCCTTCTGGCCACGGGTTTACATGTCC750.10189525168127166No Hit
TTGAATGGGGAACCTTTGTGCCCTATCACCCAACGCTCCAAAGTCATAATTG750.10189525168127166No Hit
GTCTGCGGGGTTGCATGTATTGTGATTTTGTTTGATCATTTGTGTGCATTTC750.10189525168127166No Hit
AGCACTGGGCTGTCTCCAGACCCACTAGGGTGGAAAGAAGGTTCCTGTGGGC740.10053664832552135No Hit
GTTCACGGGCTGCAGAATGGTCGCACTGGAGGTTCAAGCTAACTGGCCTCCA740.10053664832552135No Hit
CTGTGGGGGTGATTTGTTGTTTTTATTTTATTTTAAATATAGTATATGCATT740.10053664832552135No Hit
GCAACGGGCTGTGCTAGGGTGTTGGGGAGTGGGAAGGCATTTTAAGGGTAAC740.10053664832552135No Hit
ATCGCCAGGGTGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC740.10053664832552135No Hit
CTTTAAGGGAGTGACAGTGATATGATGCTGAACATCATCAACAGCTCTATTA740.10053664832552135No Hit
TTTTAAGGGGAGCCTCGCCCGCCCAGAGCCCCGTGGCCAGCGGCCGGCCGCG740.10053664832552135No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)