FastQCFastQC Report
Sat 31 Dec 2022
SRR5845983.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5845983.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64959
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCTCGTATGCCGTCT8481.305438815252698No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCTCGTATGC7101.0929971212611032No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGC1130.1739558798626826No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGGAAGCACTGTCTCTTATACAC870.13393063316861406No Hit
AGGTTAGGGCAAGGTCTGCTCCTGGAGTTCCAGGTTCTTGGTTAATTATAGT850.1308517680383011No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCCTGTCTCTTATAC830.12777290290798812No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCTCGT790.12161517264736219No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCCTGTCTCT770.1185363075170492No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCA770.1185363075170492No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)