FastQCFastQC Report
Sat 31 Dec 2022
SRR5845982.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5845982.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63183
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCTCGTATGCCGTCT7271.1506259595144264No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCTCGTATGC6891.0904831995948276No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGC1260.19942073025972176No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCCTGTCTCTTATAC1020.16143582925787No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCAACTCGTATGC880.13927797034012313No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCA830.1313644492980707No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGGAAGCATCTCGT820.1297817450896602No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGGAAGCACTGTCTCTTATACAC790.12503363246442872No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)