FastQCFastQC Report
Sat 31 Dec 2022
SRR5845510.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5845510.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129996
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTCAGTGTGATCTCGTATGCCGTCT4290.3300101541585895No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTCAGTGTGATCTCGTATGC3930.3023169943690575No Hit
GTGTAAGGGATTGCTCATGTAATGGGACTTCAGGGACAGCAGAGCAGGCAAC2360.18154404750915412No Hit
GTGAAAGGGGAATCACCACCAAAAGAATAAATCATCTAGGAATACAGCTAAC2350.18077479307055602No Hit
AACTACGGGATTACAGCTCATGTACGTCTGTTTTTATAAGATCAATATTAAA1910.14692759777223915No Hit
AATTGCGGGAAGAACAAAGACACAACATAGCAGTATCTCTGGGACACATTTA1770.1361580356318656No Hit
TTCACCGGGACCACACGAGGCTGAGGCACCCCTGTGTATTCAGGATGGGAAA1700.13077325456167882No Hit
TTGTTGGGGCAGGAATACAAGTCCATTCACTATTCAAATGGCGTCTTGCTTT1690.1300040001230807No Hit
GCCCAGGGTGCTGGGATTGCAGGTGTGAGCCACTGCGCCCGACAACAAGACT1680.1292347456844826No Hit
TCATAGGGGAGCAGGAATCAATGAAATTGATAACAGAAAAAAGTAGAGAAAA1660.1276962368072864No Hit
TTCATAGGGCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCACTTCATTT1650.12692698236868827No Hit
GTGGGCGGGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGG1640.12615772793009014No Hit
CTTAAAGGGCTACCTGCTGTTTTCTGATGACCTCTGGGATCTTTTCATTTAG1610.12384996461429583No Hit
TCACTGGGGTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGAT1610.12384996461429583No Hit
TTGCCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1600.12308071017569772No Hit
AGACATGGGGATGCCTGAGGTAGAAATAGTAGAGTTTTGGCTGCAAAATGCT1590.12231145573709962No Hit
CTTCGAGGGGGGTGGCACCTCCAGAGTGAAGAAGATCCTTTGTCAAGAAGGG1590.12231145573709962No Hit
GTTATGGGGACTCGTGCACATGAAAGGGAGTTTGGTTCTGTAGATGATGAAA1560.12000369242130526No Hit
GGTCGGGCACAGTCAATAACGAAATACAGCTGGGCTTAGAAGAGTTGTGGGA1560.12000369242130526No Hit
TGCCCTGGGCTGCTCTAAGCACTTTGCATACGTATTAGCTGATTTATTATTC1550.11923443798270716No Hit
GTTCCGGGGAAACTGGATGACATTATGCTGGATGTTATAGGCCAGAGAAGGA1540.11846518354410905No Hit
ACACATGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1520.11692667466691282No Hit
ACTGGTGGGGGTTATAGAAAAAGTCAAAAGGAAAATAAAGATATATTTTGAG1520.11692667466691282No Hit
TAAAGCGGGGCAATAAGCAAAGCAAAATAAAATTTGAAGTTGGGGTGATTTG1510.11615742022831471No Hit
CCATACGGGAGGGCTGTTTCATGTACTTCTCTCTCTGACTCTGTCTTGTCCG1500.1153881657897166No Hit
CCTATTGGGCAGTTTTGAGAAGTCATATAGAAGGCATATATTCCCTTGGTAA1490.1146189113511185No Hit
TTAAATGGGCATGGTTGCTGTTCTATTAGAGCCATTTAATCTCATTTGTCTC1490.1146189113511185No Hit
AACTAAGGGGAAGCTGTTCAGAAAAAAGTTAACATTGCAGTCCTGAGACTGC1490.1146189113511185No Hit
CTAGATGGGGATTTGTAATTTTCCTTTTTTATATTGACTTTGGTTTGATATT1480.11384965691252039No Hit
CAGCCTGGGTGACAGAGCGTGACTCCGTCTCAAAAACAAAGCACAAAAGAAC1480.11384965691252039No Hit
AACTAAGGGCACAAGAGTCCCCGCATGAGGGAAGCAGGAAGGTCAGAACCTG1480.11384965691252039No Hit
GATTAGGGGGTTGCTGTTTTAGGCCACCCCAGCTCAGCCAATGATTCCTTTC1470.11308040247392229No Hit
GACCAAGGGCTAGTCCTAGAAAATAAACCAAGGCCATATCAAATAAGAAATC1470.11308040247392229No Hit
CACTTTGGGTATTGCACTTCCTGTGAAGCAGGAGCCTCCACAAATTGACGCA1460.11231114803532416No Hit
ACTCAGGGATTGCTTGAAGATTTTTAGTTTTAGGCAATCATATCTGTCGATC1460.11231114803532416No Hit
AGTATGGGGTCCCTGGTTCATGTTGAGTTGAACCAAGTTCTGTGCTTTTACT1450.11154189359672605No Hit
ACTAAAGGGCTGGTGTCTGAGGACAGCCCCGCGGCAGCCACCACCGTCCTCA1450.11154189359672605No Hit
CTCCCAGGGATCCTCGGTTTTCCTACTGACACTTTCGATTGCTTTCATTTGT1440.11077263915812793No Hit
GATTATGGGCTAATCTGTAGCTTTCTGGGGTTATCTGAATTGTTTCCAGGGC1440.11077263915812793No Hit
TTGCTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1440.11077263915812793No Hit
GATGCAGGGAAGTTTTAGTTAAACATAGAAAATATCTGCCCATTATCATCAA1440.11077263915812793No Hit
AAGTGGGGGTCACTGAGGGAATTGTGGTTTTACGTGCCATGTATTGGTGTCA1430.11000338471952983No Hit
GGCTGGGACAAGCTGGAATGTTCTCCCATGGTTGTTTTTGGGGAAAACTGGA1430.11000338471952983No Hit
AGTTTAGGGATTCTACAAGAATGTTTCCTTTTACTTAAGTTAACAAAAGAAA1420.10923413028093172No Hit
TTCAGTGGGGTATCCTTTGAACGTGAAAAGCTTCTTTTGCCAGTAAGATGAA1420.10923413028093172No Hit
TTTAGGAGGGCCAGGAAAGTACATTTGCATTAAAAAGTGCAACGGACAGAAA1410.10846487584233362No Hit
TATAGCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1410.10846487584233362No Hit
ATAGTAGGGATCTGTAAGAAGGTACTGGAACTTTCAGGGCTTGAATAACAAT1410.10846487584233362No Hit
TATTCTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1410.10846487584233362No Hit
AGTATAGGGGTACAAGACCCTGTCTCGAAAAAAGGAAACCTTATTTTTTGGT1410.10846487584233362No Hit
TAACATGGGGTTGTAGATTATATAATGAGTTTAAGCAAATTAAAATTATAGA1410.10846487584233362No Hit
GCCAACGGGCAGCAGTTAGCATGTTATGTTTTTCCATTGTCTAACAACTTTA1410.10846487584233362No Hit
AGGTGAGGGATTTCCTCCTTCGATGTTTTCCTCTCAGTTGTAAAAGATGAAC1400.1076956214037355No Hit
AACAATGGGGTGCTGTTAACTGGGGAAGGCATCTAACTAGTAGCCTGCTACT1400.1076956214037355No Hit
GATCGCGGGGTTAATTGGGCAGATTTCAGCACTTGTCTTGCTCATGCTATTC1400.1076956214037355No Hit
GGCAACGGGGCATCTCAAATGTTTTCTGCAGAAAAAAATAAAAAGATTCTAA1390.10692636696513738No Hit
CCCCCAGGGAATCCCAGCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA1380.10615711252653928No Hit
TGAAAAGGGACGGAAAGAGAAGGGTTCACGGGAAGAGAAGCAGAAGCCCCAG1380.10615711252653928No Hit
GTCCTAGGGGGAAAATACCTACCTTGTTGAACTTTGTATTCAGGGTTATGTC1380.10615711252653928No Hit
AATGCCGGGGAGCCAGACCCAGACCCGCGGCCTTCTAGAGAGGGTCCGGCAG1370.10538785808794117No Hit
TAGGTCGGGGAGATGTGATTTGGAATGCAAATAATGTCTAAAAAATGTTCTT1370.10538785808794117No Hit
TTGTAAGGGTTAAGGCTGTTTTTTAAAATGTTTATTTGAAAGACAATTTTCT1360.10461860364934306No Hit
TCAAGAGGGAATCTTAGCTCACTGCAGCCTCTGACTCCCGGGTTCAAGCAAT1360.10461860364934306No Hit
TCCAATGGGATGATGACCTCAGGATATTTAGGAATTTTTACTAATTGTTTCA1360.10461860364934306No Hit
GCCTGAGGGATACAATGACCATCCAACCATGCAATCCCTCTCCTGGGTATTT1360.10461860364934306No Hit
AGCATAGGGCTCAAAGAAAACAATAAACAGAAGAACTAGCACATGTGTGTCT1360.10461860364934306No Hit
ACCAAGGGGGTGTTTGAAGGGGACTCATATGTCTTATTTCTGGTTGAAGTAG1360.10461860364934306No Hit
GCACATGGGGAAAAATAATATAGCTAGAAGAATCATTCTACCTGATATTAAG1350.10384934921074496No Hit
TCAGGAGGGGGACATGCTGGCCCTGCAGATCATCGACCTCTTCAAGAACATC1350.10384934921074496No Hit
ACCTCAGGGATTATCAGCAAGATAAAGACAGATCTTATTATCTGTCCTTAAA1350.10384934921074496No Hit
ACTGATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1350.10384934921074496No Hit
GTCAATGGGTATAACATTGTGTAGACAATTAGTGGTACCAAGCCAGTCTGAC1340.10308009477214683No Hit
GTGGCTGGGTTGTGAAAACCTGAATGCTGAAACAAATATATTTTGTTGCAGA1340.10308009477214683No Hit
TAAAAGGGGTCGCAGCCTGCTTTTCTTAGATGTTTTCTTGCTGTTCCTTGTC1340.10308009477214683No Hit
GTATATGGGAAGGACAGCCCCCTTCACCCTCCATCCCTGCAGGCTCAGGGGT1340.10308009477214683No Hit
TTTTATGGGCATTAGTGGTACAGTCAATATTATTTTCAAGATTAAGAGAAGC1340.10308009477214683No Hit
ATCAGTGGGTATGTGTTTTACCCAACATCATAATATATCCTATGAAAAAATT1340.10308009477214683No Hit
TCAACTGGGACCGGAAGATAAGAAGACCCAGTAGGCCCTCCTGCCTCCCTGC1330.10231084033354872No Hit
AACTATGGGATGTTACAAGGACTGACTATATGTAGAAGGAAAATGTGACAAT1330.10231084033354872No Hit
TCCGAGGGGTATTGACAAATTTCACTTCACCCTTGAATTTGCATGAGGAACT1330.10231084033354872No Hit
AGCATCGGGCAATTTAGGAATGCTCAATGTGCTGTTGATTCTTTCAATCCAC1330.10231084033354872No Hit
TTTCATGGGAAACCACTGCTCAATGAAATAAAAGAGGACACAAACAAATGGA1320.10154158589495062No Hit
AAACCAGGGATAATAGAAATGTATTTGTGTTTCTAATAACCAATGAGTATAT1320.10154158589495062No Hit
TGATAGGGGACCAAAACACCAGTGAAATTCTGGTTGCTAAAAAATTATCTCT1320.10154158589495062No Hit
GCTCACTTCTGGTCTTTTTGGCCGGGAACTCCTGATTGGTGTTAAGGTGGTA1320.10154158589495062No Hit
GCTCATGGGCACCTATGTTAAAACCTTATTTCACATTCCACATCATTTTAGA1310.1007723314563525No Hit
GAGAACGGGAATCTTAGGAGTTTGAGAGACCATTTTAGTTGAGACATTGAGT1300.1000030770177544No Hit
ACGTTGGGGTTTGTTATTTATGCCTCATAATGTGTATGTTATGTGTATTCCT1300.1000030770177544No Hit
ATTGCGGGGAAATTAAGGCAGAAAGAAACAAGTTCTTTGAAACCAATGAGAA1300.1000030770177544No Hit
ATTCTTGGGGGATGTAGAATTAGGGTGTGGTATGGTGAGGGAAAAAGGCATT1300.1000030770177544No Hit
GTTTGGGGAGTGAGCAGGAGTAGCTATTCCTATATTAGACAAAACAAACTTT1300.1000030770177544No Hit
TGTGCTGGGAATTATATTGTATGTTGAAGTCTTCAAAATTGGTATTTTTGTT1300.1000030770177544No Hit
GAACCAGGGTATCTTGGGTGTCGAATGTGTCCATTCCATGCAGAACCACAGC1300.1000030770177544No Hit
GGTTAACGGGGTGGCACATTATGAATCTACTCAGTCTTTGCTTGGAATTTAT1300.1000030770177544No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)