Basic Statistics
Measure | Value |
---|---|
Filename | SRR5845411.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 163233 |
Sequences flagged as poor quality | 0 |
Sequence length | 52 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTATACACATCTCCGAGCCCACGAGACTACCAGTAATCTCGTATGCCGTCT | 581 | 0.355932930228569 | Illumina PCR Primer Index 5 (95% over 21bp) |
TGTCTCTTATACACATCTCCGAGCCCACGAGACTACCAGTAATCTCGTATGC | 579 | 0.3547076877837202 | No Hit |
TCAGCGGGAATGGCGCAACACTTTGTAATACAAATGAAAGTTTTCAAAACTG | 192 | 0.11762327470548235 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACTACCAGTAACTGTCTCTTATACAC | 179 | 0.10965919881396531 | No Hit |
TGTCTCTTATACACATCTCCGAGCCCACGAGACTACCAGTAACTGTCTCTTA | 168 | 0.10292036536729705 | No Hit |
TTCCTGAGGGTTTAATAAATCATTAAATTATTTCATTAAAAAAGAAAAACAG | 165 | 0.1010825017000239 | No Hit |