FastQCFastQC Report
Sat 31 Dec 2022
SRR5843721.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843721.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30040
Sequences flagged as poor quality0
Sequence length46
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC510.16977363515312915No Hit
AATCCTGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC370.12316910785619174No Hit
CCTGCTGGACTTTGAGCGGCACGATGATGATGAGCTAGGCTTCCGC370.12316910785619174No Hit
ACCATTGGGGATTGAAGAAAAACTCTTGAACGATACCACCACCATA330.10985352862849533No Hit
TAATCAGGGGGGACAGCCAAAGGGGACTTGAAGGAGACGGGCGACA330.10985352862849533No Hit
CGCTCAGGGAATCGGGAGCCCGCCGCCGGGGTCGCAGCATGGGGCG330.10985352862849533No Hit
ACAACTGGGTATGCCACAACTAGATACATCAACATGATTTATCACA310.10319573901464714No Hit
CAATATGGGGAGCGAGGAGCGGCTTCTCTGTGTGGAGAACAACAAA310.10319573901464714No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)