FastQCFastQC Report
Sat 31 Dec 2022
SRR5843695.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843695.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70372
Sequences flagged as poor quality0
Sequence length46
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACCACACCCTGAGTGCAGGAACTGGGGAGGGTCCTGCTGGTGGG820.11652361734780878No Hit
CAGGTCAGGGGGTGTTAGTTGCCCGGCACTGAGCGAGCGGCTGCTA790.11226055817654748No Hit
CTTGATGGGCGCTCCAGGTGGCCGAGAGGCTGACAGAGCAGTACAA740.10515545955777866No Hit
CACAAAGGGATCTCTGTTCATCCACACACATGTGCATGTGTACATG730.1037344398340249No Hit
GACCACGGGGCACTCGGCGGTCGAAAGGGGAGTTCAAGGAGACGGG730.1037344398340249No Hit
GCACTGGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAA710.10089240038651737No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)