FastQCFastQC Report
Sat 31 Dec 2022
SRR5843573.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843573.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22838
Sequences flagged as poor quality0
Sequence length46
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTAGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCT380.16638935108153077No Hit
GCGTTGGGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAAC360.1576320168140818No Hit
CCAGAAGGTATCCATGCATTACAGCGACCCCAAGCCCAAGATCAAT350.1532533496803573No Hit
AATGGGGGACGCAGGTGGCCCGCGCGACACGCGCATGCTCCCTAGG350.1532533496803573No Hit
TGTGCTGGGATGCCACAACTAGATACATCAACATGATTTATCACAA340.1488746825466328No Hit
TCTTGTGGAGAGAGAAAAAGTAAAGGACAGAAGAAGGAGACTGGAG340.1488746825466328No Hit
CGCTGTGGGTGGAAGAATTTTCTAATTAGGACAGAGCAACAAAGCT340.1488746825466328No Hit
TCTGCAGGGGGGACTTAAGCGCGGTGGCCTCCCCTATCCCCTACGA340.1488746825466328No Hit
AAACTGGGGGGCATGGAACTACCTGAAAGGGATTCTGCAGGACCGT340.1488746825466328No Hit
TAATGTGGGATGCCACAACTAGATACATCAACATGATTTATCACAA330.1444960154129083No Hit
AATACTGGGGTACTGTGGCAGGGACCATATTTTCCTGTACAAATTA330.1444960154129083No Hit
TAGGAGGGGATGCGGAGGGCGCCTCTGCCCCTCTCATGGAGCTACT330.1444960154129083No Hit
GCAACCATGATCAAGCACTTCCTGGAGGACAGCAGTGATGATGCTG330.1444960154129083No Hit
ATTTCCGGGAGCGCAGGAGGCTCGGGTGACGTCAGGCGCGCCGCTG330.1444960154129083No Hit
CGAACTGGGAGCACCCAAGGCTGGAGTGTGGGGCCTGCCAGGAGTC320.14011734827918382No Hit
GGTGCAAATCCAAGTCGCTTTTTAAAAACTGTGACATGATGTGGAA310.13573868114545934No Hit
CAGTGAGGGTCCTGGACACATTCCAGAGAATTTCGTACCCAAACAT310.13573868114545934No Hit
GATTTGGGGGAGACTGGAAGCGAGGCTGTGCTGCTGGGATGCCAGC310.13573868114545934No Hit
GCAACAGGGGCTTCTGAAGTGATTTCCGCTCCTTTTTCTTGCGCGG310.13573868114545934No Hit
TACTAAGGGAGTCCGGGTGTGCTGTCTCACTGGTGAGGTCGTGTAC310.13573868114545934No Hit
ACGCTTGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACT300.13136001401173483No Hit
CCGGCAAAGGGCTTGTCAGTAGGTCCCCCTCAACTCCATACTCAAC300.13136001401173483No Hit
TCATGCGGGCCCGCTGCTGACCGAGGACTGACCACTCGACCAGGTT300.13136001401173483No Hit
TGGCTTGGGGCTTCAGTTTAGGGGAAGTATGGGAACAAAGGACTTG300.13136001401173483No Hit
GGCTCCGGGAAGCGCATCTGCTGGGCCTTCTCAGGATCCACTGCGG300.13136001401173483No Hit
GCTGCTGGGAGACTGGAAGCGAGGCTGTGCTGCTGGGATGCCAGCT290.12698134687801033No Hit
CAATTAGGGGGACCTCTTCCTGCGTTCTCACGGCTCTTTCTGTTTG290.12698134687801033No Hit
CTACAGTGGGGGCAGACGCGGAGACTGACTGACCTGCGGAGCCACT290.12698134687801033No Hit
TGCTTTGGGGTGAACTACCCTATGGAGAATGGCATCGTGCGGAATT290.12698134687801033No Hit
ATTCCGGGGAGTACTGAGAAGCGTCGGGGAGCGCAGGCCCAACAGC280.12260267974428583No Hit
TTCTACGGGAGTCAGGTCAGTTATCTTGAGCCTAACACGTCGATTA280.12260267974428583No Hit
CCGCTGGGGCAGAAGAATACGCCCAGCAGGAGGTGGTGAAGAGATC280.12260267974428583No Hit
CAGCCTGTAGGCAGCGTCTTTGTCCCACAGCTGGCCCAGGGTGGAG280.12260267974428583No Hit
TCCACGGGGAGACAAGGGCATGGGGAGGGAGGCGACAGAGCCTTCA280.12260267974428583No Hit
TACAAGGGGATGACAAACATACGAAAAACACACCCATTATTTAAAA280.12260267974428583No Hit
CATGGTGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCTG280.12260267974428583No Hit
GTGGCAGGGGAGACTAACATGGGGATCATTGCTGGAGTGGCATTTG280.12260267974428583No Hit
ATCATGGGGCAGCTTCTGTCAGCAGTCTGTCTGAATCCTTACCAGT280.12260267974428583No Hit
TCACAATGGTGCTTTTTTTTCCTGGGGTTTTATCCATTCACTCATA280.12260267974428583No Hit
CAGTTAGGGTATGAAAACTTATTTGTGGAAAAGAATATGAAGTATA280.12260267974428583No Hit
TGCAGTGGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGC280.12260267974428583No Hit
GCCACCGGGCGCCCCGCAGCGGGTGGACTCTATCCAGGTGCACAGC270.11822401261056134No Hit
ACTCGGGGGGTCCAGATCCATCTCACGCTTATTTAAAACTATTGTT270.11822401261056134No Hit
GTGCCTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC270.11822401261056134No Hit
CTTCAAGGGGAGTCTTGGCCAGCCAAAGGGGACTTGAAGGAGACGG270.11822401261056134No Hit
TCCTAAGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCT270.11822401261056134No Hit
TCTTACGGGAGGCTTGTGGAGAATTTGTTGGCGGTGGTGCTGCTTG270.11822401261056134No Hit
TTGCGCTGGGGCATGAAGCCGGTGATATGATGGGTGGCCACGCCAT270.11822401261056134No Hit
CTCAATGGGCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGC270.11822401261056134No Hit
GTTAAGGGGGCAGAAGCAGATCTTATTTCCAGGAAAAGTTTTGAGC270.11822401261056134No Hit
AAGCACGGGGAGGTTTGGCGTTCCTAGCTATGAAGCGGCTGTCCTG270.11822401261056134No Hit
CTTTGTGGGGAAAGAACGGTATGAACACAATGTTACCTTTCACAGT270.11822401261056134No Hit
AATGCAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGC270.11822401261056134No Hit
TTCGTAGGGGCGAGCGGCGGCGGCGGCGGCGGCCGGAGGGACCATG270.11822401261056134No Hit
TACCGCGGGCGATCTAGCCTAGGGGGAATTCTCCAGATTACTTCCA270.11822401261056134No Hit
GCGCCAGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCT260.11384534547683686No Hit
GCTAACGGGGAGGAAGCGGAAGTCCGGATTTTCAGCCGGCGCGTGA260.11384534547683686No Hit
GCACTAGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACAT260.11384534547683686No Hit
GACAATGGGAGTGCCCCATGAGGACATGGGGAGAAAGAGCTCCTGC260.11384534547683686No Hit
CTTGCCGGGGGCGATTCTTCCCTCCTGTCCCTGGGCTGTACTGTCG260.11384534547683686No Hit
TATTCGGGGCTTTTCATTGCAGGAGAAGAGGACAAAGATACTCAGA260.11384534547683686No Hit
AATTACGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC260.11384534547683686No Hit
AGAAGCGGGGGCACTTTTTAAAAGTGGAGCCTCAGGCCAGCCCCTA260.11384534547683686No Hit
CTATAAGGGGCCGACAAGGCGGGTTGCGGGGGTTGGCGCCAGGGCT260.11384534547683686No Hit
CACTGGGGTGTGCAGAGCAAGAACAGCAGTTACTTCGTTGAGTGGA260.11384534547683686No Hit
GACTAAGGGGTAGAGAAAGGAGTGGAGCTTCAAACTGGCAGCTTTT260.11384534547683686No Hit
AGCAACGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA260.11384534547683686No Hit
GGTCACGGGAGGAGGGAAGATGGCGGACGAGGAGAAGCTGCCACCA260.11384534547683686No Hit
ACTCTTGGGTGCACTGGAAATGTTGTGCAGGCTTGCCACTCTTTCT260.11384534547683686No Hit
GCAACTGGGGAGTGCTTGAACGGAACCCGGTGCTCGACCCCTCCGA260.11384534547683686No Hit
ATACACGGGGGGAATTCAGATACGAATAGCTCGTAACCAAACATGC260.11384534547683686No Hit
GACGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTC250.10946667834311236No Hit
GAGCTGGGGGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACA250.10946667834311236No Hit
GCTAGAGGGGGAGATGGTGTCTACCAGAAAGGGATGGACTTCATTT250.10946667834311236No Hit
TACCAAGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACAT250.10946667834311236No Hit
TCATAGGCGGGAGAAGGGGCGAGGAGACAGAGCAGGAGCAAGAAGA250.10946667834311236No Hit
CTCTAGGGGGGCTCTACGCTTCTTTTACTCTTTTGTAAAGGTGCTC250.10946667834311236No Hit
TCTGCAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC250.10946667834311236No Hit
TTATCTGGGGTAGATCAGGCTGGCCTCAAACTTGTAGCAACGTTCC250.10946667834311236No Hit
TGCCACGGGAGAAACCAGAAGTTCCGCCGCCGAGCGAACACCTTAG250.10946667834311236No Hit
CTGCCTGGGGCTCCTTCTGCCCAGTTTTCCTTGCTTTGTCCACATT250.10946667834311236No Hit
TCTGTCTACACGGTGGTCTGTCACCATCCATAGACACACTGGATCA250.10946667834311236No Hit
AGCCAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATCC250.10946667834311236No Hit
TGCATTGGGGGCAAAGAGGTCGGTGCGCAGCTCGCATCACGGGTGA250.10946667834311236No Hit
GCAAAGGGGTCCCGCTGACAAAGACTATGGCTTGATGAAAATAGAC250.10946667834311236No Hit
ATTCACGGGATGACAAACATACGAAAAACACACCCATTATTTAAAA250.10946667834311236No Hit
CGACAGGGGGAACAAAACAACAGCAGCAGCAGCAGCAGCAGCAGCA250.10946667834311236No Hit
GAGCCTGGGGGGCTCGCGCTGCGTACAGGCCTTCCGGGCCCGCAAC250.10946667834311236No Hit
CCATCAGGGTGTGAGTGTCTGTGTCTGTGGCAGCCTCTGGAATGGG250.10946667834311236No Hit
TGCGATGGGATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCA250.10946667834311236No Hit
CAGCCTGGGTTGGAGTGGACAAAGGAGAGCAAAGCAGCGGAAGCAT250.10946667834311236No Hit
ATTCTAGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCT250.10946667834311236No Hit
GAGGCGGGGGGGAGCTGCGCGGGTACTTAGGAGTGCACGGGAGAGG250.10946667834311236No Hit
TATCTGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTT250.10946667834311236No Hit
CGTTCAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC240.10508801120938786No Hit
AACTTGGGGGCTCGCGCGGAAGCCGGCTTCTAGGTGGGAGCTCCGT240.10508801120938786No Hit
TCTTAAGGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCT240.10508801120938786No Hit
TACGTTGGGACTCGCGTCGCGGCTGCGGAGACTAGAAGGAGGACTC240.10508801120938786No Hit
ACGGAGGGATGCTGGAAAAGGTTGTTCTCATTAAAAATACCCTAAG240.10508801120938786No Hit
CACCAAGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCT240.10508801120938786No Hit
AGGTCTGGGGATATGTGTGGCCGCCAAATGTCACCATCTCTCCTCA240.10508801120938786No Hit
TGTGCTGGGGGGTTCTCAGGTAGAGAGCAGAAATGTCCCTGGTCTT240.10508801120938786No Hit
CACAGCGGGATGCCACAACTAGATACATCAACATGATTTATCACAA240.10508801120938786No Hit
AGTCTTGGGATACCAGCAAAAAAGACTTAAAGGATTATTTTACTAA240.10508801120938786No Hit
GCTGAAGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACT240.10508801120938786No Hit
GCTCCAGGGTCCTTTCAGCGGCGCGCGGCTGCAAGATGGCGGTGCA240.10508801120938786No Hit
ATGTACGGGGAGCTGTAGATAACGAGAGGGATGGAGTCACGTACAG240.10508801120938786No Hit
TAGCTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC240.10508801120938786No Hit
TCTATGGGGAGTGAGAGAGAAGCCTGCCAAGGGGGCCTGTCAGAAA240.10508801120938786No Hit
CAAACTGGGGCTCCCCCACAGCGTAGCGGCGCACGAGCGGGCCGGG240.10508801120938786No Hit
TCACTTGGGGCCATCCTGGAGAATGAGGACTGGATCGAAGATGCCT240.10508801120938786No Hit
CCCAAAGGGCTCTGTGAGCCGCAACCTTGCCCAGCGAGCGGTTGGG240.10508801120938786No Hit
CGTACTGGGGCCTTAATCAGAGCCGATCTCGAGCCCACCTGTTGAG240.10508801120938786No Hit
ACTAGGGTAGTAAAGTGGCCAACGCCATCCTTTTCTTCCGACTGGA240.10508801120938786No Hit
CATTCTGGGAGAGAGAAAAAGTAAAGGACAGAAGAAGGAGACTGGA240.10508801120938786No Hit
CAACATGGGAGGAGGCTGAAGAGGAGGTGGCTTAAGTCTCCTGCCA240.10508801120938786No Hit
TTCTCAGGGGAGGCAGGAAAGATGGCTGTCCTTGCGCCTCTGATTG240.10508801120938786No Hit
GACACCCCCCAACCCTGCGAGGAGTCTGTTTGCCAAAGTTACCAAG240.10508801120938786No Hit
CTCTATTGGGTATATGATTGAGCCCATTGATGAGTATTGTGTGCAA240.10508801120938786No Hit
CTTTCAGGGTCCGGGCCGTAGGCCTGACTCCTCAGAGCTGCTGTCA240.10508801120938786No Hit
TTCCATGGGAGACTGGAAGCGAGGCTGTGCTGCTGGGATGCCAGCT240.10508801120938786No Hit
TCACCAAGGGGATGCTGTGGGCTTTGGCGATCAGATCAATAAGGAT240.10508801120938786No Hit
TTCTTGGGGCAGGAGCAGGAACAGGATGAACAGTCTACCCACCTCT240.10508801120938786No Hit
TTAGCTGGGGACATATCAGGCCATGGTCCATGAACTACTGGGCATA240.10508801120938786No Hit
GTCTTAGGGACTTAAGCCAGCACTGCTGTGCGGGGCTCTGGCTGCG230.10070934407566336No Hit
ATTTTGGGGGCTGGACTTAGCTAGGGGTTCCTTCACGGGGCCACTG230.10070934407566336No Hit
GCAGCAGGGGGCCAACATGGAGGAGCGGAAGGCTGCCCTCAAAACA230.10070934407566336No Hit
CTTACTGGGGGGACAGACGACCAGACTGAAATCTGCAAGCAGATTT230.10070934407566336No Hit
CACATAGGGGTAGGATTTCAAATTCATTTTCCATGTAATTTCTGCA230.10070934407566336No Hit
TGTTATGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC230.10070934407566336No Hit
CTGCAGGGGACATCGACATCCGGGAGTCTGATTGCCTGTGGCTGTT230.10070934407566336No Hit
TCTAAAGGGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAA230.10070934407566336No Hit
CTAGCGGGGTATTAGAACTAGCTGGGAGGATTGAGACAGACGCCAT230.10070934407566336No Hit
CATTCTGGGTCACAGTAGGATTAGATGTAGACACACGAGCTTACTT230.10070934407566336No Hit
GCATAGGGGAGTCAAAATGGCGCTTGCTCAGAAGCTGCCGAGGCGC230.10070934407566336No Hit
TGCCTTGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTT230.10070934407566336No Hit
TCCACCGGGCGCTTTCCAAAATCTTTAAGCTGGGAGGAAGAGACAG230.10070934407566336No Hit
AGTTAAGGGGGCTCTTTCTTTTTCTCCACAGGGTCGTGGTGGCAGC230.10070934407566336No Hit
GCACCGGGATGACAAACATACGAAAAACACACCCATTATTTAAAAT230.10070934407566336No Hit
GAATCTGGGTAGTTTAAAGCCCTCAATTTCTGTTCTGCTGAACTTT230.10070934407566336No Hit
GTTATAGGGGAGTGGCCTTGTTCTCGATACTTCGTTGTGGTTGTGA230.10070934407566336No Hit
TCTGCAGGGGTTACAGTCTTGTATTGTATATGTGACTGAATTCATA230.10070934407566336No Hit
TCCATGGGGACTTGGAGGATTCTGGGTGGAAACTTCAGTCATCTGA230.10070934407566336No Hit
ATGCCAGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA230.10070934407566336No Hit
AGAATAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC230.10070934407566336No Hit
GCAATGGGGGAGAGCAGCCCCGGAGGACTTCCGGACTGCGCGTCCT230.10070934407566336No Hit
CTTTTAGGGGGACAGCTATTTGGCAGGGACTGTGCTACATGGTGTC230.10070934407566336No Hit
GAAAATGGGGGAATTCGAGCTCTTTCGACGTTTTGAAGGAGGGTTT230.10070934407566336No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)