FastQCFastQC Report
Sat 31 Dec 2022
SRR5843512.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843512.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52281
Sequences flagged as poor quality0
Sequence length46
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTCTGGGATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCA950.18171037279317534No Hit
TACCTTGGGGGGAATTCCTCTGTGTCATGATCGTGAGTTGTCGCAG850.16258296513073583No Hit
AACCATGGGATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCA810.15493200206576002No Hit
GCTGCTGGGATGACAAACATACGAAAAACACACCCATTATTTAAAA770.1472810390007842No Hit
CAAAGTGGGGGAGGGGATGCCACAGAAAGGAAGTGGCAGAGCCAAA740.14154281670205238No Hit
GATATGGGGATCTACAGCCGGGAAATATGTCCCATGGTTTATTTAG740.14154281670205238No Hit
CTCACCGGGATACCACAAAAAGATCTTCCGGACCACCATGCTGTTC720.13771733516956447No Hit
TCAAGCGGGATCAACAGGAACATCCTCGTGTTAGATATTGAGGCTG710.13580459440332052No Hit
CAGTTTGGGATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCA690.1319791128708326No Hit
CTGAACCTGGGAGCCTCCCTCAAGGGTGGAAAGTGAACAGCACCCC690.1319791128708326No Hit
CTACAAGGGACATATACTACACTAAGCTACAAGGAAAATCCCTCTT680.13006637210458866No Hit
AGCTATGGGGGAGATGGGGCTGGGGGTCCATGCTCAGCTGAAAAAA680.13006637210458866No Hit
ATAACAGGGGTGGGGAAGTCGGGAGGCGATGGGGCAGGGATGAGAA680.13006637210458866No Hit
CTCTCAGGGACATGTTAAGAAAACAAAAAACCAGTTTAGCAGAGGA680.13006637210458866No Hit
ACTCCTGGGATCCCGCTGGAGGAGGGGACCCAATTCTCTACCAGCA670.12815363133834473No Hit
GCTGCTGGGCGATCTCTAGCAGGGGGTTTGGAATGGAGCAGGAATA670.12815363133834473No Hit
CTTGCAGGAGACAACAGAAAGCCTACATTGCTACCCAGGGGCCCTT670.12815363133834473No Hit
TAGTTTGGGATAACGGAAAACGACCACGTTCTCCTCTTTTGGAAAA670.12815363133834473No Hit
TTTGCTGGGAGTGAGCAAGTCCCAGCTTACAGTCCGACTCTTACTT660.12624089057210075No Hit
GGTGGTGGGGTCCCTCATGAACTTCAGAAACTACAGTGTCCCAAGA660.12624089057210075No Hit
TACTGGGGGGGCCCTCCTGCTGGCTGAGGGCTTCTACACCACCGGC660.12624089057210075No Hit
CAATCAGGGGAGCTAGAGGCAGCCAGTCCTACTACCAGGAGCCGCC660.12624089057210075No Hit
CAGTTAGGGGGACATACCCTGGCTCTCTGACCACTCCGCCTCTGCT650.12432814980585681No Hit
TCTAGCGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCTG650.12432814980585681No Hit
CTGACTGGGGGCTGTGCGGGGCTCTGGCTGCGCCTGGTCTGGCAGG650.12432814980585681No Hit
TTCGATGGGGACTTCTATACTACGGTAACACATTCATATATGCATA640.12241540903961286No Hit
TCTTTAGGGGCTTTTTTTTCCGGTTGCGGCGCCGCGCGGTGAGGTT640.12241540903961286No Hit
TGAAATGGGGATGGTGGGCAGACAGCTCCTGCCAGTATCCGCCTCT640.12241540903961286No Hit
AGCACTGGGGAGAAAGGAGAGAGAGAGATTGAGATTTAATAAGAAA640.12241540903961286No Hit
AAATCAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC620.11858992750712496No Hit
TGAACAGGGACAACAAGTGGCACAAGATGGAACAGAAGTTTCGCAT610.11667718674088101No Hit
TTGCTTGGGATCAGAAGGAACATCAGCCTTTGGAAAGTATCACAGT610.11667718674088101No Hit
TACAGTGGGATTTGAGGAAGTTCTTTAAGTGAGCTCTTTGGAGGCA610.11667718674088101No Hit
TGATGCGGGCGATCTATGGATGGGGAATCAAGAGGAAAAATGACAG610.11667718674088101No Hit
CAGCTAAACCGACGCAGTTTTGCTCCTTGGATTCTGAGCCCGGGCA610.11667718674088101No Hit
GGGACCGGGGGCATTCCTTTTGGGATGTTTTTAACCACTGACCCTC610.11667718674088101No Hit
TGCAAAGGGCTTCAAACGTGTGAGGTTGTTCATGGTAGCCAGTGAA610.11667718674088101No Hit
TACAACGGGGTGACTTATTTTTGTTAACATCAGATACCTGTCTTCG600.11476444597463704No Hit
TCTGTTGGGTCCGAAAAGTACAGGGACTTTCTGGTAAGGAACCCCC600.11476444597463704No Hit
AGCTGTGGGGAGAGAAATTCCTAGGCAAATGGATGGACCTGGAGGG600.11476444597463704No Hit
AATGACGGGGGAATACAGCACTAGAAACCTTGCGGAAGATGCCTCA600.11476444597463704No Hit
GATCATGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACT600.11476444597463704No Hit
GGTTTAGGGAAGAGTGAAAGCCCTTAAAGGTTGTAACCTAACCTTC590.1128517052083931No Hit
CTAATAGGGATCTCTCCCATGGCCATGGACCCCCAGTACCTCTCAC590.1128517052083931No Hit
TTTCTGGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACT590.1128517052083931No Hit
CTATACGGGAGAAACAAGAAGGGATGTGCTCAGCTTTGCATGTCAG590.1128517052083931No Hit
GCCCCAGCCTTTCCTCTTAGACAAGTGATGTCACCCTGATGTCACA580.11093896444214915No Hit
ACTTAGGGGAAGGTACCACCTCCCACAGCCCCCACAAGTGAAGCAT580.11093896444214915No Hit
TCAACAGGGGTTTGGCTAAAGCCAAAGAACAGCTTTTCATAGCCAC580.11093896444214915No Hit
AAACGGGGAATGCAGAAATGAGATACCGGGAAAATCTCCCTCTGGT580.11093896444214915No Hit
TGTAATGGGATTCAAGCTAGAGCTTGGGTCACCAACCTTCCTGATG580.11093896444214915No Hit
GAAACAGGGCGTCATCCTTGTCTCCATGGTGACCGCTTCATCACCA570.10902622367590521No Hit
ACGATAGGGACACTGTCACCGACTTGGTGGAGTATAGCATCATCAT570.10902622367590521No Hit
CTTCAAGGGACTGTAGCATTTCTGTCATGTAAGAGGTGCTGACAGC570.10902622367590521No Hit
TCTTATGGGAAGCAAATGATAGGCTACCGAAAAAAAAAGTTTTAAA570.10902622367590521No Hit
ATTTGAGGGGGGCGCGGGTGCGGCCAGAAGAGACGCGCGGAGCCGC560.10711348290966126No Hit
CCATATGGGAAGCCCTAACTCAGCCAACCTTCCTTACGGCAATTAG560.10711348290966126No Hit
CTTCCGGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC560.10711348290966126No Hit
AGCAGAGGGTACTACTAACAGACCGCAACCTAAACACAACTTTCTT560.10711348290966126No Hit
TTTTTAGGGACCAGCACGTGGCCGCAGTGGATCCTGAGAAGGCCCA560.10711348290966126No Hit
TCATTTGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC560.10711348290966126No Hit
TAGTCAGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTT550.10520074214341732No Hit
AGATTAGGGACTGCTAAAATGAAAGTAATTCTCAAGATACTGTTGT550.10520074214341732No Hit
TGCACTGGGTCTGACCTGAAAGAAGAAAGTATAATTAGGAAGGACA550.10520074214341732No Hit
TATACTGGGATGACACATGGAGATAGTTCTGAACTGGGTTGCACAA550.10520074214341732No Hit
TAGACAGGAGGTGGCTGAGCTCTGTGTTGACATCTTTGCTACTGTG550.10520074214341732No Hit
CTTTCCGGGGAGCCCACCACATATTCACAGTAGGATTAGATGTAGA550.10520074214341732No Hit
TTACGAGGGGCAGCAGCATCTGCCCAGATGCATCCAAGAACTTGTT550.10520074214341732No Hit
TGGTTAGGGAGGAAGAGAAACAGTGTTGTCAGGATCATCTCACTCC550.10520074214341732No Hit
CGCAGGGGACAACAACGAGTTGGTCAAGTGTGAGCGTCGGGCACTG550.10520074214341732No Hit
GGAGGTGGGATACAAACCAGGCAGAACAGTGCCGAAAAATAGCTGC550.10520074214341732No Hit
ATTTCTCGGGGGAACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGA550.10520074214341732No Hit
TGGCATGGGGAAGATTGGCATTGAGGCAAAGAACCTAGCCAGCTAT540.10328800137717334No Hit
GCACAAGGGACATGTAGTTACTTACTACTCCGGAAAAAAAGAACCT540.10328800137717334No Hit
GCTGCTGGGGGCTCCTTCTGCCCAGTTTTCCTTGCTTTGTCCACAT540.10328800137717334No Hit
TGTAGAGGGAAGAAATCTTTACTTTATAACTTGTCAGTAGAAAAGT540.10328800137717334No Hit
GCGTTGGGGCTTCTGATTTTCTGCAGTGCTAGAGCAATGGGCTCAA540.10328800137717334No Hit
ACGCTTGGGAGGAAACAAAATTATAGCCCAGAGGTTGTAAATGTTG540.10328800137717334No Hit
TTCATTGGGATTGAGATGACTGTAAAGAAGACCTTATCCAATTTCC540.10328800137717334No Hit
CCCATAGGGGATCTGTTGTAGGGGGACTCAAGCCGGCTGCCAGTCA540.10328800137717334No Hit
GCGTGCGGGGGGGTCAGGGCCGCTGGTATTTGCTGTAAAGAGGGGC530.1013752606109294No Hit
CACTGCGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA530.1013752606109294No Hit
AAGACAGGGGGAAACCAGCCTTCATTCCATGTCCTTACAGGCTCCT530.1013752606109294No Hit
ACTACCGGGATGCCAGTGTGCTGACCGCACAGCCCCGCCTCATGGA530.1013752606109294No Hit
CACCTCGGGCCCACCACCAAATATACACAGCTTCCCAATAAATGAT530.1013752606109294No Hit
AACCATGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACT530.1013752606109294No Hit
ATTCGCGGGTATGGCCTACCCATTCCAACTTGGTCTACAAGACGCC530.1013752606109294No Hit
GTAAATGGGACACCTGGAGCAGCTTTCTCCAGAACAAAGTTGATTG530.1013752606109294No Hit
TCCTTGGGATGCCACAACTAGATACATCAACATGATTTATCACAAT530.1013752606109294No Hit
CATACTGGGACTGGAAAATAAGCAGAGAATGTCAGGAAGAATTTTA530.1013752606109294No Hit
TCCAATGGGGGCTGTTTTGATTGAGAAACACATTTTGAAACAGGTC530.1013752606109294No Hit
AAATCGGGGGGATCTGGAAAGATAACTCAACAGTCAAGAGTACTGG530.1013752606109294No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)