FastQCFastQC Report
Sat 31 Dec 2022
SRR5843491.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843491.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37830
Sequences flagged as poor quality0
Sequence length46
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCATGGGACCTGGGAACCTGGCATGAAAGCTCAGGGCCAGCCTCC570.15067406819984142No Hit
CGCAAAGGGGCTCTTTCCCAGTATTACTGTTGGGAGAAGTCCCCTT570.15067406819984142No Hit
TATTTGGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC570.15067406819984142No Hit
CACGCACGGGAGGAAGAACCGGGCGGCTTCTCCATCAGCTTCGTCG570.15067406819984142No Hit
ATCTGTGGGATCTCACTCAGGATGATATCCTCCAGATCCATCCATT550.14538725878932066No Hit
CAGCTCGGGGTGGTCATTCAGGTCATAGAACAGCTGAGGGAACAAG540.14274385408406026No Hit
TTGATGGGGAACCTTTTATATCCGAAAGCATTCTCCTTCACCATGG520.13745704467353953No Hit
GACAATGGGATGCCCCTGTCATCTCTGCTGAGAAAGCCTACCACGA500.13217023526301877No Hit
AGCCAAGGGGTGATACGCACACTGATAACTATGCGCAGACGCTTGA500.13217023526301877No Hit
CCATTTGGGGGGAATTCCAATGATAGGCTAGTCTCGCGCAGTACAT500.13217023526301877No Hit
ACGATAGGGGACTACAGTGATGAGGACAACAAGCCCCTGCAGGGCA500.13217023526301877No Hit
CGAGATGGGATAGTTTTTGGAAACAAACCCAAAACTACACAAAAAG500.13217023526301877No Hit
CGCCAAGGGGCAGATGGTACCGGGCAGTCTTGGACAGCCAAAGGGG500.13217023526301877No Hit
GCTTACGGGGATAGCATGGCGGAAGGCGAGCATGCGTGGAGGAAAA500.13217023526301877No Hit
CTTTGTGGGGACCTGTGCGATGTTGGCCTTCATTTCTGCAGCCCTG500.13217023526301877No Hit
AGTCTAGGGGTTGAGACTGGACGTTGGAGCTGCTTGAACAGTATAA490.12952683055775838No Hit
TGTAATGGGGACGAGATGGAGTTTACGGAAGCAGAGAGCAATATGA480.126883425852498No Hit
GTACTTGGGGTTTGGAAGAGGAGGAAAGGGGACCAAAGGGAAGTGA480.126883425852498No Hit
GCTTCAGGGAAAGATTTGGGGCATAGAAAAGAGGAGAACAGAAGGC480.126883425852498No Hit
GTTATCGGGATATGAGGGAATTCTGAGCTGAGATTGTCCTTGTCAC480.126883425852498No Hit
CTGCCTGGGAGTTGAAGAACTCACAAAAAACTTTCTGTTTCTGTCT480.126883425852498No Hit
AAACTTGGGAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCAAC480.126883425852498No Hit
AATGCTGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACT470.12424002114723763No Hit
TAGTGGGGAGATCAGCTCATTTATATCCCACTTCCTGATGAGAAGT470.12424002114723763No Hit
TGGTGTGGGGGGAATTCCTCTGTGTCATGATCGTGAGTTGTCGCAG470.12424002114723763No Hit
TCATGTGGGAACCTCGGTGGAAAAATAACCATTCCCTGCCTCCTAG470.12424002114723763No Hit
GTTACAGGGAAGCACTCCAGAAACAAAGGCATCACGTCACCATCTG460.12159661644197726No Hit
CAATATGGGATTCCATAGCTGGTGGGAAATGCTGATCTAAAGAGCC460.12159661644197726No Hit
ATCGTAGGGACTCTGAGCATCACTGCCCCGGCCAGCCTCAGTGTCC450.11895321173671689No Hit
TTCCGCGGGGTACCCCGGAGGCCTGTAAGTGACAGGAGGAAACAGG450.11895321173671689No Hit
CTTACCGGGACTCGGGGAAGACCGTAGAGATCAACAACACGGATGC450.11895321173671689No Hit
CCTACTGGGACCCTAAACCTCATAATTTTATCATTCACAACACACA450.11895321173671689No Hit
AATGCAGGGGGAGCAAATAGCATTTGGAAGTCATGTTCACAGTACT440.11630980703145652No Hit
GGCTACGGGAAGACAGCTTGAAGAAGAGAAAAGAAGACAGAAGATT440.11630980703145652No Hit
TCCAACAGTGCCATTCCCTAGGCCAAGCATATATAAACTATCACAC440.11630980703145652No Hit
TTTTAGGGAGGAGGCCCCACAAAAAGCGTCATGAAGATGCCATCGT440.11630980703145652No Hit
AATAAAGGGCACTGCTCTTTTTGCTGGTGAATGTACTGTGTGCAGT440.11630980703145652No Hit
GGCTATGGGAATCTGTCCCTGGCTACGACTCAAGCCCTGACTGACA430.11366640232619615No Hit
CCCAATGGGGGTCTTCCAAGTGTCGGCACTCAAGCGCAGCCCTGGC430.11366640232619615No Hit
ATTCATGGGCAAGGCATCTAGCTCAGGACAGAATCGGATTCCTCAT430.11366640232619615No Hit
CTACTAGGGATTACAAATGCGGAATCAGAACAATAAGAAGGCATGG430.11366640232619615No Hit
TAACCAGGGACTCTTTTAGTTTTTGAGTCAGGGCACATGTCTGATA430.11366640232619615No Hit
GACCGAGGGAACAATTTTTTTTCCAGTTTGTTTGAAAGGGACTGCT430.11366640232619615No Hit
TTAGCTGGGGCAGCAGGTGCTCCAGGAGGAACACTTTGATGCAAGA430.11366640232619615No Hit
AGAAAAGGGGAGATCAAGCGGTGGTACAGCAGGCTGCGCAGCAAGT430.11366640232619615No Hit
AATCTGGGGAGACTCCTACATGTCAATAATCAACAAATGCATCCGA430.11366640232619615No Hit
TACATTGGGAACCTGGGCGTCGTGTCTAGCCCCAGCCGCATCAAGC430.11366640232619615No Hit
TTACAAGGGGGGGAAAAGATGGCCGCGCCTGCAGCGTCCGGACTGT430.11366640232619615No Hit
CGACAAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC430.11366640232619615No Hit
TTAACTGGGACTCATTCAGGTGTATGAAGGTGAAAGGGCCATGACC420.11102299762093576No Hit
ATTTCTGGGGACAAACTATGGTACCAGAATCTGCCAAAGATCCCCT420.11102299762093576No Hit
CAAACTGGGGGGGTCCCTCAGATTGAGGTTACTTTTGACATCGATG420.11102299762093576No Hit
TCGCAGGGAATGTGAAAACCAAATAGGCAGGTTGTGTCTTTGGTAA420.11102299762093576No Hit
ACGCTTGGGATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGG420.11102299762093576No Hit
TTATTAGGGGGGCTGGGCTGCCCAGAGAGTATGTGCCCAGATGATA420.11102299762093576No Hit
GTTATGGGGAGCAGGAGTGTGGATGTGACCAATACCACTTTCCTGC420.11102299762093576No Hit
CCAAAAGGGAGCTGCTCTTCCGGGATGAAGCCGTGGGGAAGATAGA420.11102299762093576No Hit
ACGCCTGGGGTTCGCAGCGCGGCACATTGAGCCAAGGCCTCTCAGT410.1083795929156754No Hit
TAAGCAGGGCCCTTTTGGCTCTCCGGTCGGCACCATGGCGGTCGGC410.1083795929156754No Hit
TACGTAGGGATATCCAGAAGATTAAGTCAGGAGAGGAAGACTTTGA410.1083795929156754No Hit
ACGCCTGGGATTCACCTCCAGGAATGCTCCTTATCTGTCTTATGTG410.1083795929156754No Hit
GGACATGGGGAGCCCATGATACAATTAAGAGGAATGTCATGGGGGG410.1083795929156754No Hit
TAATATGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC410.1083795929156754No Hit
AAAGTGGGGAGGAGCGACTGTTTGCTACCCAGCTCAGTCAGTAATA410.1083795929156754No Hit
TTCTGGGGTTTGTGATGGGTGTGAACCACGAGAAATATGACAACTC410.1083795929156754No Hit
CACTTTGGGGGTTGAGCTCCGGGCTCTACAGAGACGAGGTCCACGC410.1083795929156754No Hit
CGCCTAGGGGAGAATGGAGGCTACGCAGACCAGACCTATGATGCAT400.10573618821041501No Hit
GAAAATGGGGACCAATCACTGTCAGACTTTAAACTCTCTTGAGCCA400.10573618821041501No Hit
AACATGGGGAGCCTGAATTCTGTGAACAGTCGGGCCAGAAGGGAGA400.10573618821041501No Hit
TCACTAGGGATGGAAGTGGAAGTTACAATGATTTTGGAAATTATAA400.10573618821041501No Hit
CATTAGGGGATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCA400.10573618821041501No Hit
CGTAATGGGGGAGCCGGGGCCCTCATGATGCTGGTTGGTTTCCTGG400.10573618821041501No Hit
AGCTCATGGGATTACAGAATTAAATTAAAATTAAAAATTAACAAGT400.10573618821041501No Hit
GGCACTGGGATAAGGAGAACTTCCTGAAACGCTTCCAGCTCACCAA400.10573618821041501No Hit
TGTAGTGGGGTGGGGCCCAAGATGTCCAGGAGAGGTTTGCTTCCAT400.10573618821041501No Hit
CAACCGGGATGCTTGCTGCTGCCAGGAGGGGAGGAAGCTGTTGATG390.10309278350515465No Hit
GAGTTAGGGGCCTGCCAGCTGCTCTCCAGCCTCTTCGGCCTCTATT390.10309278350515465No Hit
ATCACAGGGATGCCACAACTAGATACATCAACATGATTTATCACAA390.10309278350515465No Hit
ATTAGCGGGGTCATGGCTTTCTTTGCAGTTTTGACCATTTTTATCC390.10309278350515465No Hit
CGTTAAGGGAGGGTGAAAGCAGGGAGATTCATCTTTCATGCTCCCT390.10309278350515465No Hit
CTTAACGGGGGCCATTTTCTATTCAGGACGTGGTACAACCTCTTAC390.10309278350515465No Hit
ACGCTGGGGGCCTTTCGCTGCTGCGGCCGCAGCCATGAGTATGCTC390.10309278350515465No Hit
CTCTTTGGGGCTGAACAGGGTCTATTTGTCCTGGATAATAGGTCCC390.10309278350515465No Hit
AACAGTGGGGGGGAATTCCCCGGGCCAATTGCCTCTATAACTAGAG390.10309278350515465No Hit
GTCATGGGGAACCCATTGAGTGCTAAGCAGCTCTGGAAGGGAGGGC380.10044937879989425No Hit
CCGCATGGTGATCACACACTAATAATTGTTTTCCTAATTAGCTCCT380.10044937879989425No Hit
AGGCTTCCCTAAACCATCTTTGGTACTGGACATTCATGGCTCTCTC380.10044937879989425No Hit
AAGAGCGGGATATCTGATTTCACAGAGGCACCTGTCCTCAACATCC380.10044937879989425No Hit
TGTTCAGGGGAAGCCTGCTTTCCTTTTGGTTTTGAGTACTCGGCAC380.10044937879989425No Hit
ATTCAAGGGAAGCCGAGGGTTCAAGGATCAGATCTATGACATATTC380.10044937879989425No Hit
TTATGTGAGGGGTTTTGTCTCCTCGTTGCCGAGCCCTCGCAGATTC380.10044937879989425No Hit
CAAAGCGGGGAGGATACATCGAAGCTAATGCAGGCCCGATGCTGCC380.10044937879989425No Hit
CCAATGGGGGACTGCTGCCATCTTGTAAGAGAGCTATCACCATTGC380.10044937879989425No Hit
GCATAAGGGACCTTAGAAGGAGGAAATGGGTGTAATGACCCGGAAG380.10044937879989425No Hit
GCAACAGGGAACCTTTTATATCCGAAAGCATTCTCCTTCACCATGG380.10044937879989425No Hit
AATCAAGGGAGGATGAACAGTCTACCCACCTCTAGCCGGAAATCTA380.10044937879989425No Hit
ATACTAGGGGGCTGGTCCGAGTGTCCCGCATCGGGTTGCGCGCGGT380.10044937879989425No Hit
TTTTACGGGTCATCATTCATTAGACAAAGTGGTTCTTTCTATGTTG380.10044937879989425No Hit
TAAAACGGGGAATTTTGATACCCATAAAGTACTGGCAGACTTTATG380.10044937879989425No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)