FastQCFastQC Report
Sat 31 Dec 2022
SRR5843337.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843337.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15565
Sequences flagged as poor quality0
Sequence length46
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCATGGGGGTCTAGGTCAGTAGTGTTATTCCCTGTGCTGGGCTC220.1413427561837456No Hit
TCGCTTGGGACTGCAGAGCTGGGGGCCAGCTTCTTTCATCTGTGTC220.1413427561837456No Hit
ATAAACGGGCACTTGTGAGCCCTTTGGAAAGGAAGGGGTTGTGATC210.13491808544812078No Hit
TAAAATGGGAACTATTCAGACTGGGAAAATACAGATTGGTTCAAAG200.128493414712496No Hit
GTCATGGGGACTTTGAATCTAGTATTTCATGCTTTTAGCCTCCAGA190.12206874397687119No Hit
CCTACCGGGGAAAAGAAGAGTAGCTGAGGAGCTGGCATTGGAGCAA180.1156440732412464No Hit
TGGCTTGGGAGCTGGACTTATGTCAGGTGGTTTGATCCCAAGTCTT180.1156440732412464No Hit
ACACAAGGGGTCCCCAACCAATCTATAACAAGACCCAAACTAATTC170.1092194025056216No Hit
CGCTGAGGGGTCTGTGGTTAAGATGGGGGAGTATCTTGCTAATCTA170.1092194025056216No Hit
TTTGCTGGGAATAACAACATCCCAGAGACAAAGAAGGTGGCATCAT170.1092194025056216No Hit
GATTGGGGATCCCAACAGGGTAGATCAGAGTTAAGAGTAGATAATC170.1092194025056216No Hit
ACTCATGGGAAGCCAGGGACTCTGTAACTCGAGCCCTGGCAGAAGG170.1092194025056216No Hit
ATCTACGGGATACATGGGCTGGTTAACCACTTCTGGAAGTGCAGCA170.1092194025056216No Hit
TCTTTGGGGGTTGCTTATTTCTCCACGTTGTTAGCTTCAGGTTAAC170.1092194025056216No Hit
GCCACAGGGATTGTGCCAGTGTTGACAGTTTAAACTGCTAACAGAT170.1092194025056216No Hit
GCACTGGGGGCAAATGCAGAGGACCTGAACCGCCTCACAGCCTGCT170.1092194025056216No Hit
GGTTGAGGGGCTGGATTCTGAGGGGCACATCAAAATCGCTGACTTT170.1092194025056216No Hit
TATCCTGGGGAAATAGACAACGAGCACTCTTGGACTGAACCTGTGT160.10279473176999679No Hit
CACGCGGGATAGGGATTCTACCTTTTCTTTTAGAATGGGACTTTTC160.10279473176999679No Hit
CAACCTGGGGTTTTCTCTGTCTGCTGTCTAACCCTGTGCCTTGCCT160.10279473176999679No Hit
AACATAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC160.10279473176999679No Hit
TCGCACGGGGCATCACACAGCGTGGCTGTGGGGTTGGGGGATGGGA160.10279473176999679No Hit
TCTACAGGGGGGTACACTAAACACAAAAAGGGATGGATACACTAGA160.10279473176999679No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)