FastQCFastQC Report
Sat 31 Dec 2022
SRR5843322.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843322.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25303
Sequences flagged as poor quality0
Sequence length46
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTATAGGGATGACAAACATACGAAAAACACACCCATTATTTAAAA430.1699403232818243No Hit
CTCACTGGGATCTCCACAAGTCCTGGGTCAACGCTGTAGCCTTTGA370.14622772003319764No Hit
AATTTAGGGGGGACAAGTCAGTCTTTGCTTTCCCCGTGACATGTAG370.14622772003319764No Hit
AAGCAGGGGGGATGTAGTTGAGTTGCAGCGGAAAGGAAATGTGTCA360.14227561949175987No Hit
GTCGACGGGGGGACCAATATGAACTGCTCTGCCTTGACAATACCCG360.14227561949175987No Hit
CACGCAGGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCT360.14227561949175987No Hit
TTATACGGGTAAGAAAGAGAAGCATGTAAATAAGTCCCAGTGCTCA350.13832351895032208No Hit
CTTGACGGGGAGGCACTTGCTGCCCTTGCGTGCCCTGTCACCAAGG340.13437141840888434No Hit
TAGATGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC340.13437141840888434No Hit
TACAGGGGGGAGAGGGGAACAAGATGGCGGCGCCAAAGGGGAAGCT340.13437141840888434No Hit
GAGTTTGGGGGGAACAATTAAAAGAACTTACCAAGCAGTATGAAAA340.13437141840888434No Hit
CATAACGGGGACACTGCAAAGAGCACGCTGGAAATGCGGACAAAAT340.13437141840888434No Hit
TCTGCAGGTGCTATCTGAGAGGTACTCGCAGAAGTGCCTGGAGATC340.13437141840888434No Hit
CTCTTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC330.13041931786744657No Hit
CAATGAGGGGCCTTCCTAGATTGCAGAGCTTTCATATCCACGATGC330.13041931786744657No Hit
GCGACAGGGGCTCCCAGGCTGCCCTTCCAGGCCTCAACATCATACA330.13041931786744657No Hit
ATTCACGGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCT320.12646721732600877No Hit
TTTCAAGGGGAGACTGGAAGCGAGGCTGTGCTGCTGGGATGCCAGC320.12646721732600877No Hit
GCAGCGAGGCCGAGATCTGTCGCTTTATCCAGCAGCTCAAGGGCCG320.12646721732600877No Hit
CGTTCAGGGGAGACAGAAAGGGTCAGGGTCCTGAAGCAGCCGGACA320.12646721732600877No Hit
TCGACAGGGAGTTCCTCGGCCTGTGACACGTAGCAACAGGGCTACC320.12646721732600877No Hit
AATGTGGGGGACCCGGGAGGCCGAGGGAGCTGAGCGCCGAGGGGAC310.122515116784571No Hit
AGTACAGGGGTAAGTAGGGAACCAGGAATGGGAATTCTGGGAATAA310.122515116784571No Hit
TTCAGCGGGGGCAGGGCATATATTTGTTTGGAGAGGGTCGATGTGA300.11856301624313323No Hit
ATTTCAGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCTG300.11856301624313323No Hit
CTAAAAGGGGAGGGTTTTCGTCTCAGGTTTGCTCCGCCGCCACTTT300.11856301624313323No Hit
CCTGTGGGGATGCTCGAGTATATGAAGAGCTCTTAGCCATTCCTGT300.11856301624313323No Hit
TGCTTAGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCTG300.11856301624313323No Hit
CGTACAGGGATGACAAACATACGAAAAACACACCCATTATTTAAAA300.11856301624313323No Hit
AGCCATGGGGAGACAGGCTCCGTCCATGCCACATCAGTAGCAGCCT300.11856301624313323No Hit
GTAGGAGGGGGCCGAAAGGGAGCAGCGGGGAAGGAGGATGGCGGAT290.11461091570169546No Hit
TTTCTAGGGGAGCTACTGCTAGGAACCTGAGGGAAAAGATGGATGA290.11461091570169546No Hit
CTAACCGGGGAGTATGGCATCGAGGAGAATGGAGACCAAACCTGTG290.11461091570169546No Hit
TACACGGGGAAACGGAAGGGGCCGGGAGAGGCCGCGTTCAGTCGGA290.11461091570169546No Hit
CATCTTGGGGGGGCCCCCTTTGCTTCCCTGGTGGCCACTGGATTGT290.11461091570169546No Hit
AAAAGCGGGGCGATTCTGTGGGCGGAACACATCGTCTCTCCGCCAT290.11461091570169546No Hit
GGATCCGGGACTTCACAAAAAATACAACACGTTACAGTGTCCAGCA290.11461091570169546No Hit
GTATGTGGGTTACTTCTGCCAGCTCTACACGGAGGACACCCACCAT290.11461091570169546No Hit
CACTGTGGGGGAGTTGGCCTCCCTGCTCATCAAGATTGACATTTTC290.11461091570169546No Hit
TTTACCGGGATGGCATGTGCCATCAGCATTCTGGGAAAGTCTCTGG290.11461091570169546No Hit
AGTCACGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCTG290.11461091570169546No Hit
GACACAGGGGGAAGGCGAAGCTCGCGAAGCAGAGGAACATGGACGT290.11461091570169546No Hit
CAGCATGGGGGAGGAAGGGACATGCAGCCGGAGGACCTCAGCTTGG280.11065881516025768No Hit
GCTCACGGGATCCTCTCTGCGAGGGCGGCTTTGCCGTGCTTACCTG280.11065881516025768No Hit
ACACGCAAGTCCATCGATCACTACCCCACATTGCAACCAAGCACAT280.11065881516025768No Hit
GCAAGCGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGT280.11065881516025768No Hit
GTTCAAGGGTGTGTTTACCACGCTGGTCCTACTGGCTTCAGCCATC280.11065881516025768No Hit
AGAGACGGGAACTTATCAGCCCATGTTCATTACGTAACTTTGTACT280.11065881516025768No Hit
TGTCAGGGGAGTTGCGGTGGGGCGTGCGAGTAGGCTGAAGCTCGGA280.11065881516025768No Hit
TCAGAAAGGGGACACACTGCAGGACCGCTAGACGGACGACAACTTC280.11065881516025768No Hit
AAGCTCGGGGTGTCATGCTTTTTACTGAAATGTAATCAGGGATCAG280.11065881516025768No Hit
GCTACGGGGGGGAGGAAGGGACATGCAGCCGGAGGACCTCAGCTTG280.11065881516025768No Hit
GACACCGGGGGGTTCCAGAGGCCAACATCAAGCTCATTCTTTGGAG280.11065881516025768No Hit
GTATGTAAATTTATTCATAGACCACAGTGCCTTGACTTAACCCACA280.11065881516025768No Hit
GCGTACCCCAGGCCGAACCCGTAGCCACCTTCGGCACTGCAGTAAC280.11065881516025768No Hit
AAATGGGGGGAAGGAGAAGAAGACAGGGCCAGGAGACGAATGGGAG280.11065881516025768No Hit
GTATATGGGGGGGCGGGGCCGTGTGGAGGAGGAAGCAGGCCAGGCC280.11065881516025768No Hit
TAGACGGGGGGCACTTCCAACTGAGGAGAGCAGAACGGAAAGGTTC280.11065881516025768No Hit
TATCCCTCCCAGGCTTCTGACACTCTCTTCAGCTCTAAAGAAAAAG280.11065881516025768No Hit
CTCGAGGGGGTTTTAGGTGAATTGTTTTGAGGGAATAATTTGTTTA280.11065881516025768No Hit
TATGGAGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCT280.11065881516025768No Hit
GAGCTCTTCCCCAGAAGCGAAATATGATGCATTCCTTGTAACCAAC280.11065881516025768No Hit
CTTAGTGGGTCATCTACATACATTGCTGAGAGTAATGAGAAAAGGA280.11065881516025768No Hit
CATGCAGGGATTCTCGCTAGTTCGATCGGTAGCGGGAGCGGAGAGC280.11065881516025768No Hit
GCTCTCGGGGAGCATCAGCCAGCGATACCTGGAGTCTGCAGAAACC280.11065881516025768No Hit
GTTTAGGGGGGATCTTTCAGAACCTCAATGGAGCCTTAGATGAAGT270.1067067146188199No Hit
TTGCTGGGGGGAATTCACTGTCCTTTCATCCATAAGCGGAGAAAGA270.1067067146188199No Hit
CAAGCTGGGGCTGGGGCGTTGCTGTGTTTTAGTTGCTGCTCCTGCT270.1067067146188199No Hit
ACACGACGAGGGGCGGCGGGGCGGGCCAAGCACGGGCTTCCGGCGA270.1067067146188199No Hit
GAACCTAGGGCTTTTTCATTGCAGGAGAAGAGGACAAAGATACTCA270.1067067146188199No Hit
TTGGCTGGGGTGCCGGCAGTACCGTGCCGTGGTCTACAGCAACACC270.1067067146188199No Hit
GTTACTGGGGCCGGCACCATGTCTGGTTTGTTTGGCCCACTCTCCC270.1067067146188199No Hit
TTGCAGGGGAGAGCCGGGCAGGGTGTGCAGTGGTCACTGTACTTGG270.1067067146188199No Hit
GTTTACGGGCTACCTTACAAAGTATAATGTTCACTAAATGAATGAG270.1067067146188199No Hit
GGTTATGGGGATAAAACCATTGATGAGGAGCTGGAGCGAGACAAGA270.1067067146188199No Hit
CGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG270.1067067146188199No Hit
GCCGGGGGGGTCGGGGTCACAGGGACACGGAGCCCGCTGTCCCGCT270.1067067146188199No Hit
AAGCAAGGGGATCAGAAACACTGGGGTACCAAGCAGTGAGTCATCT270.1067067146188199No Hit
GCATGAGGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCT270.1067067146188199No Hit
GTTACAGGGAGGGAAGCTGCGAGCCTCGAAGTGCGTTTGGGCTCGC270.1067067146188199No Hit
ATATGCAGGGGCGCAGAAGCGGGTCGGTCTGTACTCCCCGCTCCTC270.1067067146188199No Hit
TCTTTTGGGGTTTCCGGTTCGGTAGGTTCACGATGACGGAGCCGGG270.1067067146188199No Hit
TAACACGGGCTCATGGTGGCAGGAGAATCTGGTCTGGGTAAATCCA270.1067067146188199No Hit
GCCTTCGGGGCCCTTTACTTCCCGGTGCTCATTGTCCACGGAGACA270.1067067146188199No Hit
TCTTATGGGCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTC260.10275461407738212No Hit
CACTACGGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCT260.10275461407738212No Hit
CACCCAGTGCTGCCTACTACTGCCTTCTCTTGCAGGAAGAGGTAGA260.10275461407738212No Hit
TCATTGGGGGATCTGTATTCGGGGAGTGACGAGAGGCTTTGTCCGG260.10275461407738212No Hit
CCTGCAAGGATGACAAACATACGAAAAACACACCCATTATTTAAAA260.10275461407738212No Hit
CTTACTGGGAGTCCCGGAGCCGGTCCGCAGAGGGAAGGAGGCAAGA260.10275461407738212No Hit
GCATTAGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCT260.10275461407738212No Hit
CGCGCTGGGCCAAGTCCTTATTGGCCCAGCCAAGATCTTCTCCAGT260.10275461407738212No Hit
TTTGTGGGGCTGACGCAGGCCAACACTTCTCCTCAGAAATGACAGG260.10275461407738212No Hit
ATATTAGGGGATGAACAGTCTACCCACCTCTAGCCGGAAATCTAGC260.10275461407738212No Hit
GCATAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCT260.10275461407738212No Hit
TCAGTAGGGGAAAAATGAGGAGAGATGGGTGGCCTGCCATGGGCAT260.10275461407738212No Hit
TGAGCTGGGGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTGTCAGC260.10275461407738212No Hit
TCGCTGGGAGAGAGAAAAAGTAAAGGACAGAAGAAGGAGACTGGAG260.10275461407738212No Hit
TAATCCGGGGAGGCCGGCTTGGTCACTATGGAGGAGATAGGCATTT260.10275461407738212No Hit
TCCACTGGGGATCTCATGCCGGGGGACGCGGTGCAGACCATGACCC260.10275461407738212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)