FastQCFastQC Report
Sat 31 Dec 2022
SRR5843315.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843315.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12537
Sequences flagged as poor quality0
Sequence length46
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCAGGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCT310.24726808646406634No Hit
TTAACAGGGTGATCTTTTTTCTTCAATCAAACAGAGCAGTATAGCT290.23131530669219114No Hit
GCTACAGGGTGAGCGAACATGGCCCAGGCGGCGCGCCTTTCGTGGG280.2233389168062535No Hit
GCTACTGGGATCGTTAACATTTATATTCTCTTTATTTTTCCTTATT270.21536252692031585No Hit
GATGGGGGGGACAAGGTTAAGGGCTAACAACAGTCACATTCCATTC250.1994097471484406No Hit
CTCTCAGGGCGATCTTACACTGGGGTTAGAATCTGGGCCATGTTTG240.191433357262503No Hit
ATCCAGGGATTTTCGAGATAGGTGTGGTGGTGATGTCACATCTCAC230.18345696737656536No Hit
CGCTAGGGGGTCCATCTGCAAAACAGCTGAGTTCCAAATGACCTTC230.18345696737656536No Hit
GTAGTGGGGATACAAAGTTTCCAGTTAACAAGAAAGTATGGAATGG220.17548057749062776No Hit
TCATGCGGGTCGCACCGGGATGCCATCTACCTTCTTCAACCTCACC220.17548057749062776No Hit
TATACGGGGGGCTGCTCCCGCCGTCACCGCCTCCGAGAACATGGCC210.16750418760469013No Hit
CAATCTGGGGGAGAGGAGGGAGCTGCTCTCTACGTCCTCCTCCCAG210.16750418760469013No Hit
TGCACAGGGGGAATCCGCAATGGCAAATACAAAGGCAATGGTCGTG210.16750418760469013No Hit
CACTCTGGGGTATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTG200.1595277977187525No Hit
TTCAGTGGGGTGGAGGGACAGCTGAGCGCTTCAGTCAGGTGTGATC200.1595277977187525No Hit
AATAGAGGGATGCTGTGGTGAAATGTTCTGCCTCTGGGCACCTCTA200.1595277977187525No Hit
ATCCATGGGTCAGACCATCCAAGAAGACCCCACAGCAGCTTCCGGA200.1595277977187525No Hit
CTTGCGGGGGGACTTGAGTATTGTAGGAAGAATATTCCATGTCTAA200.1595277977187525No Hit
CACTGTGGGGGCTTTTACTCTGGAAGAGAGACAGCAATTGAACATT200.1595277977187525No Hit
TTCATCGGGGCTCTTGGATCTCCTGACATGTCCCTATCCTAATTTC200.1595277977187525No Hit
TATCAGGGGAAAGAAAAAGGGGGAAGGAACCAATCAGGAAGCCAGA190.15155140783281484No Hit
CGTATAGGGGAGACGTTCGTGGTGGAGTGAGAGGTTCCCAGGGGAG190.15155140783281484No Hit
CGCACGGGGGGATGAAGCAGATGGGCTTCTCTCTCAAGGCTACTCT190.15155140783281484No Hit
ACGTACGGGGCTCAGATTAATCAAAGCAATAGGTTTGACTTAAATC190.15155140783281484No Hit
TTAACCGGGCGGCGGAGGCGGTGGAATGGATGATATCTTCTCACAT190.15155140783281484No Hit
CGCTCAGGGAAGTCAGGGAACTTGTTCTGTTTTCCTTTTGTTTTAA190.15155140783281484No Hit
ACGAGGGACCTCGGAAAGACTGTTACCAACGCTGTGGTCACAGTGC190.15155140783281484No Hit
AACCGGGAGAAGCGGGTCGGTCTGTACTCCCCGCTCCTCGCCACAC180.14357501794687724No Hit
ACACACGGACTTGATGAGTATAACAAGAAAGGAGAGTCTTGCAGTG180.14357501794687724No Hit
GCTGGGCCTATGTTCATTAATCGTTGATTATTCTCAACCAATCACA180.14357501794687724No Hit
AACCACGGGGTGTTTTCCTTAATCAGATGGAAGTCTTCATAGGACA180.14357501794687724No Hit
GTAAATGGGACACCAATCCCTATGTGAAAGTTTTGGGTAAGTCATG180.14357501794687724No Hit
CTAGAACCGGGAACCACACAGCCTACAGTGTTGTGTTTTAACTCTG180.14357501794687724No Hit
TTCTCCGGGGGGCGGCTCTGCGGGCGGACGCCCGGCGCAGGGAGCA180.14357501794687724No Hit
ACCACTGGGGTTTGTGTTCAAAATGCAGTGTCAGCAAACCAAAACG180.14357501794687724No Hit
TTCTGTGGGAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCT180.14357501794687724No Hit
GATACTGGGATCTGATGACATGAAGACTCACAAGAACCCTGCCCTG180.14357501794687724No Hit
CTGCTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC180.14357501794687724No Hit
GTCCGAGGGGCGCATGTGTGCACATCCGTGTGCATGCTCCTGTGCA180.14357501794687724No Hit
TAAAAAGGGATTTCACGCCAGACTTGATTCCATCCTGAGAATTCAT180.14357501794687724No Hit
AAGTCCAGGATATAATGTGTGTATGTATTTAAACATGTGTACATAT180.14357501794687724No Hit
TACAATGGGAAGATATGGCGTGATCATTGTGGGTAACCCAAAGGCC170.1355986280609396No Hit
AGTTGGGAGGGAAATGGTTGGGTTTTTGTTGTTGTTGTTGTTTTTT170.1355986280609396No Hit
GGCACAGGGACTTCATCACAGACATGTTTGATGCCTGGGATGCCTT170.1355986280609396No Hit
AGCGTAGGGGTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGGTGC170.1355986280609396No Hit
CGCTCGGGTATGGTGTTCTCCCATGGAATGCTTTCCCTGGCAAGGT170.1355986280609396No Hit
ATACGGGGTCTTCCTGTCCCCAAACAGGACAGCACCAGGAACCTAC170.1355986280609396No Hit
CGTTCCGGGACTTGCTCTCAGCAGAACAGAGCCAGGCTGAGAAGTC170.1355986280609396No Hit
CACCAAGGGAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCT170.1355986280609396No Hit
CATTATGGGACCTGGATCTGTGCATTTTGTGCCTTATTCACTCGAG170.1355986280609396No Hit
CTATCAGGGGTACCTACCCACCAATGTACCTACCTACCTACCTACC170.1355986280609396No Hit
GCAAGCGGGACCTCAGTGCCTCAGTTCTGGAAGCCCTGGCCACCAT170.1355986280609396No Hit
CTTGTGGGCCTGCCTCCTAGCGTCGCCGCGGTCTTCGAGCCCAGTG170.1355986280609396No Hit
TCAATGGGGGATGTTAGATGTGAGAGTTTTAGCTGGGTGGGACTAC170.1355986280609396No Hit
CAAAGGGGGAAGGTGTTGCAGACACAGTTAGACACACTGCGCCAGG170.1355986280609396No Hit
GTCCAGGGGAGGGCGCAGGGCGGGGAGGCATAAAGGGCGCTGCGCT170.1355986280609396No Hit
TCAGCAGGCAAGGTGAAGGCCCCTGCTACCCTGGTGAGCTCAGGAA160.12762223817500198No Hit
TATCCAGGGATCATGGCATGATCTCTAGAGAAGAGACTGACCAGCT160.12762223817500198No Hit
TTAGTAGGGGATGCAGGGAAGCCTTCAAGTCTCATCATCAGGCTAC160.12762223817500198No Hit
CGTCAGGGGGGAACATCCACAGACCTACTACTACGCTGTGGCTGTG160.12762223817500198No Hit
TGTCGCCGGGAATTGAGTCCTAGAATACAGGGGATAGCAAATACTT160.12762223817500198No Hit
CAAGTAGGGATTACTAAGCCTGATGACTTAACTTGAATCCCCAGAA160.12762223817500198No Hit
ACAATAGGGAGTGTTGGGGCTGCTGTGGTTATGCTGGTCCCGGCCA160.12762223817500198No Hit
CACTTGGGGATGATGCCCTGGTGAAAGTTATCAATAATCCCAGTTA160.12762223817500198No Hit
AAACCCGGGACTTCAATACCTGGACCACCTGTCAGTCTATTGCCTT160.12762223817500198No Hit
TAAACTGGGGAGCTCCCATAGAAACTCCCCTTTGTCTAATAGCAAG160.12762223817500198No Hit
CTGATCGGGGTGCCTGCCTCCTCCTCCCATAACTGCAGGCCCTGGA160.12762223817500198No Hit
AGCAAAGGGGGGGGAGTCCTTGTTGTCCTTATTGTTCTTGCTGTGA160.12762223817500198No Hit
TTAGCGCGGGACCTGTTTATGGGAGACTATGTGGACAGAGGATATT160.12762223817500198No Hit
GAGCAAGGGGACTTTGGGACCCAGCTGCCATCCAGCTCCCCTGGCT160.12762223817500198No Hit
GTTTCTGGATAACAAAGATGGCAGTGTTGCCATTGCCAGCAAGCCA160.12762223817500198No Hit
TCTCCAGGGACTATGGAACTCCTCAGATATCAGAGCAAGAGGAGAG160.12762223817500198No Hit
CCTTCAGGGAACCACACAGCCTACAGTGTTGTGTTTTAACTCTGCC160.12762223817500198No Hit
CAAAATGGGGGATCATGAATACGTTCAGCGTGGTGCCATCACCCAA160.12762223817500198No Hit
TGGGCGGGGCCTATGTTCATTAATCGTTGATTATTCTCAACCAATC160.12762223817500198No Hit
CGACGAGGGAGGCTGGGCTGACGATAAATGACTCCTAAAGACATGT160.12762223817500198No Hit
CAGTAAGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCTG150.11964584828906438No Hit
AGTCTGGGGAGAGAGACGCCGATGGCAGGCCTGCACCAGAGGAGGA150.11964584828906438No Hit
GAATCGGGGGGGTGTGTCTCAGGCTCCCTGGCATCTGCCTAAGTCA150.11964584828906438No Hit
CTCACCGGGCTCTCTCATCTTTTGAGAAGATTATTATTAGCATTCA150.11964584828906438No Hit
ATACACGGGACTTACTGCATGGGAGACTATGTTACCAACTGAACCC150.11964584828906438No Hit
AACGATGGGATGCCACAACTAGATACATCAACATGATTTATCACAA150.11964584828906438No Hit
TCTCGCGGGATTGGTCGTGGTCTCAGTAGCCTCCGGCTCCGCTGCT150.11964584828906438No Hit
CCCTTAGGGGGGCCGCAGCCTGGGTCCTCACCGTCGCCATGGCTCC150.11964584828906438No Hit
CTTAGCGGGCAACAAGACCAACGGAGTAGAATCTATAGGTGCTTTA150.11964584828906438No Hit
GACTAGGGGAGCCCCAAGAAAAAAGAAAGCAAAGACAGCAGGCCCC150.11964584828906438No Hit
TGTATAGGGATGCCACAACTAGATACATCAACATGATTTATCACAA150.11964584828906438No Hit
TACCATGGGCCTATGTTCATTAATCGTTGATTATTCTCAACCAATC150.11964584828906438No Hit
ATTCGTGGGATGCCATCTACCTTCTTCAACCTCACCATAGCCTTCT150.11964584828906438No Hit
GCATCAGGGGGCCCGTCGCCATGGCTGCCTACAAGCTGGTGCTGAT150.11964584828906438No Hit
CTATATGGGAACATTTCTGTTTCCGACACACTTACACTGGCCCGCA150.11964584828906438No Hit
CCATGTGGGGAGGAGCTGTGGGATGAGCACTAGTGACCTGAGAGCA150.11964584828906438No Hit
TTCTAGGGGATGACGCAGAGGATTTAGAAGAATTCTGCTTTAAGTT150.11964584828906438No Hit
GATGCTGGGGGGGAGGCGCAGGCCGGTGTCGGAGGTGAGGGTCCGC150.11964584828906438No Hit
GGGAGAGTTGAGAGACTACGGGAAAAGGTGCAGGGACGACCTGGCC150.11964584828906438No Hit
TTGTATGGGTTATCTTCACCAAGCTCTTTTTAAAAACTAAACTTTG150.11964584828906438No Hit
TGTTACGGGGACACACACTGCAGGACCGCTAGACGGACGACAACTT150.11964584828906438No Hit
TACCTGGGGACTTCAATACCTGGACCACCTGTCAGTCTATTGCCTT150.11964584828906438No Hit
TACAAAGGGATGCCACAACTAGATACATCAACATGATTTATCACAA150.11964584828906438No Hit
GTTCCGGGGGAGTTCGCGTCGACTGACCAGAGTCCGCGAATCGTCC150.11964584828906438No Hit
TCCTCTGGGACACACTGCAGGACCGCTAGACGGACGACAACTTCTG150.11964584828906438No Hit
GCTCTCGGGGGCCTTGATGATTTGGCTGATGGCAACACCTCACAGC150.11964584828906438No Hit
GCTGCAGGGAGTAATACCAATAATAATTGGAGGCTTTGGAAACTGA150.11964584828906438No Hit
CACCATGGGGCCACAAACAGGTATATCCACACTGCCTATCACCCCA140.11166945840312675No Hit
GCTCAGAGGGGTCCATCTGCAAAACAGCTGAGTTCCAAATGACCTT140.11166945840312675No Hit
CGTGCTGGGGGAGGATGGGGGCACGCCACAGAAATCCAGCACAGCC140.11166945840312675No Hit
ACACCGGGAAGCCCAAGATGGAGGCGGTGGTGGTGGTAGCGGTGTG140.11166945840312675No Hit
ATTAAAGGGGATTCGGGGACGGGCCTGCTGGACACCTGTTCTCAGA140.11166945840312675No Hit
ACCAAGGGGATGTCTATTCTGTTTGCAAGTATTTTATAGCATTTTT140.11166945840312675No Hit
CAACGTGGGGATCTGCCAGTGGGAAGCAATAGCCAGGCTGGCCCGC140.11166945840312675No Hit
TCTATAGGGATCAAGGGAAAGGTATGCAGTCTGGCGGTGTGTGCTG140.11166945840312675No Hit
AGACATGGGAAATACCCAAATCAAATGCTTTCATAGAAGATGTTCT140.11166945840312675No Hit
TCGTTAGGGATGCCATCTACCTTCTTCAACCTCACCATAGCCTTCT140.11166945840312675No Hit
TTATTCAGGGATGGAGATAAATAACATGCACGTTTATAATCATTGT140.11166945840312675No Hit
TTTTGTGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA140.11166945840312675No Hit
CAACTGGGGACAAACACAAAGTGTCTATGAATTATGAGCTGTTCAA140.11166945840312675No Hit
AGCCTAGGGGACCAAGGAGGTGATGGTGGACGACAGACTTGTTACC140.11166945840312675No Hit
CTAGGAGGGGGCCGCAGCTGCGGGGCCTCTCGAGTCGGTGGACGCG140.11166945840312675No Hit
GTCCGCGGGACCGCAAAACGGGTCTGCAGATGACTGGGTTCCTGAC140.11166945840312675No Hit
TAACATGGGGCTATCATTTCATGCTTTCTCTCTGTTAAGAAGTTGA140.11166945840312675No Hit
TAACATGGGATGAAGGGACAGATGTTTTTCAACAGCTCAACATGAA140.11166945840312675No Hit
CAGTCTGCAGTGCAGCTTCACTTCTGCGTGTAAACCCAAGGGAGAT140.11166945840312675No Hit
CTTCATGGGAGATCTTTGGCGACTACAAGACCACCATCTGCGGCAA140.11166945840312675No Hit
TAAACTGGGGATGTTCTCCTTGTGTTGCCCTCCTTGTCTTTGAAAT140.11166945840312675No Hit
GGTGCTGGGGGAGTGTGCGTGCCCTCCCACTCAGTCAGTTCGGAGC140.11166945840312675No Hit
CACATAGGGGATTAGATGGTTAAATGTCTTTTGACATGAAAGCGCG140.11166945840312675No Hit
AAACTGGGGGACCACTACTGCCCCAACTGCAAAGCGCTCCTGGGCA140.11166945840312675No Hit
TACCGCGGGATGCCACAACTAGATACATCAACATGATTTATCACAA140.11166945840312675No Hit
GCCATGGGGGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT140.11166945840312675No Hit
CAATCAGGGGACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCA140.11166945840312675No Hit
GCCCTGGGGTTGAGTTACAGTGGGGACTTGTGGGTGTATGGGAAGA140.11166945840312675No Hit
ATGATAGGGGGCCCTTTTCATTGCAGGAGAAGAGGACAAAGATACT140.11166945840312675No Hit
CTAACAGGGCTGTACAGATGGCTTAATGACTTAGAGCACTGGCTGC140.11166945840312675No Hit
AATAGTGGGTACTGCACTAAGTATTTTAATTCGAGCAGAATTAGGT140.11166945840312675No Hit
CGCCAAGGGAATAGCAAGGCTCTAACCACACAGCCTACAGTGTTGT140.11166945840312675No Hit
CGCACAGGGGGAGTTGTCTCCAGTAGGGACTTTCACATTATCCTTA140.11166945840312675No Hit
TCCACTGCCCCACCTCTCGCTTCCTAAGTCTAACCTCTGCGCATCC140.11166945840312675No Hit
AGCAATGGGGTTCGCTGGGAGGGCGGAGGAAGCGGACTGTTCCGGA140.11166945840312675No Hit
GCACGTGGGATTCCTGGAAGGAGTAGCTGTTCTAATTGAGTCTGGC140.11166945840312675No Hit
AACAACGGGGAGCCCGAGGCGACGCGAGCTGAGCAGGAGCCACCGA140.11166945840312675No Hit
CACGCCGGGGGGGTGACTGAGGAAATCCATCCGCGTCGCCGCCGCT140.11166945840312675No Hit
AATTATGGGGTAACAGTTTCTAGGTTCAGCACCGGCACCCCCAGCA140.11166945840312675No Hit
GCTACGGGGGAAGATGAGCTCCTTTGAAATGCTTCATTAAATACTT140.11166945840312675No Hit
AGTAATGGGGAGGACTCAGAAAGCCACCATGGAGGGGTACCAACGG140.11166945840312675No Hit
CTCATCGGGATATCCAGAATCCCATGGAATCGTTGGCAATTCAATG130.10369306851718911No Hit
AGTTCAGGGCTTGGTCACAGGCCATGCCTTCTTAAGTATGTATGAA130.10369306851718911No Hit
CTACCTGGTCCATGAGGGTGCAGAAGGCCGGGACATCAGCACAACC130.10369306851718911No Hit
GCAGGCCGAGCCAGTGGCCCAGAACCCAGGCCACCAGCCAGAGTAG130.10369306851718911No Hit
GTCTACGGGGTACACTTAGGTTTTAACTGTAGGACTTTGTTATTAT130.10369306851718911No Hit
TTACCTGGGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGG130.10369306851718911No Hit
CTAATCGGGAGTGTTCTGTTTTTATCCTCACTTGAAAAGTCAGAAC130.10369306851718911No Hit
AATGTGGGGACTGATGCTAATTTTGGCTATTCCAAAGGACAGCCTT130.10369306851718911No Hit
ATACCAGGGGTACCTTCTGTACCTGGGGACTTTTCATACCACTGGT130.10369306851718911No Hit
CCTATTGGGAAAGTGAGAATTAACTATAACCATTTTTGAACTTTTA130.10369306851718911No Hit
TGCTTGGGGAGAACTGGGGATGGCGGCGGTGGCTGCGCGCGCGGGT130.10369306851718911No Hit
ATTGCCGGGATGGCACTGCAACTGAATATCACCTACCTGAAAAAGG130.10369306851718911No Hit
TGTTCTGGGTAAAGGCCGTGGTGGAACAGAGGGCATCATTGGTCGC130.10369306851718911No Hit
AATTATGGGAGCTAAGGGAGGAAGGAGTTGTCTTGGAAGGGGACCT130.10369306851718911No Hit
TGGCCTGGGGAGAGAGCAGGAAGTGACAGCTTTCGTCCTGGAGAAT130.10369306851718911No Hit
ACAGCTGGGGGAAGAAGTGGTCAGGCGAGCCCAGGAACAGGAGCTG130.10369306851718911No Hit
GTTACTGGGAGTGTCAATTTGGGGACTTCTTTGCCTTTGGATTCTT130.10369306851718911No Hit
AAGTTAGGGGGTAGAGCAAAGACCCACAGGGGTTGGACCCAGACCT130.10369306851718911No Hit
TATCCAGGGGATTGTAAACACTTCAGTTTTAGGTGACAGATTCTCT130.10369306851718911No Hit
GTAGTAGGGAACGCCCTGGGCACCTTTGAGCATCCCTGATTGGGAA130.10369306851718911No Hit
CCATATGGGATGGTACTGATTTCTTACAAGAAACAAAACTTTGTCA130.10369306851718911No Hit
TTTAACGGGATCGAAAAGTTTGAGAAGGAGGCTGCTGAGATGGGAA130.10369306851718911No Hit
TCATACTTGCCCGGAAAGCTGAACGACTTGCTAAACTACATAAAGA130.10369306851718911No Hit
CTAAATGGGAACTTCCTAGAACACAGACTGGATGGTGGAGAAAAGA130.10369306851718911No Hit
CAACGGGGACCAGGACTATGAGTATCTCATTAATGTGATTCATGCT130.10369306851718911No Hit
TACAACGGGGCCTTAAGTTTCTGAGAAAAGAAAACAAAACCAAAAA130.10369306851718911No Hit
ATATAAGGGAGAGCCGGGAGAGGCGAGCGGCGGCGGCGGCAGGCGC130.10369306851718911No Hit
GGTCCCGGGGGGAAGAGGGCAGCCAGGGACGGACAAAGCCCTCACT130.10369306851718911No Hit
CCAACTGGGATGCCATGGGAGCCAAGTCGGTAGGACCCCTGCAGTA130.10369306851718911No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)