FastQCFastQC Report
Sat 31 Dec 2022
SRR5843262.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843262.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30295
Sequences flagged as poor quality0
Sequence length46
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATGCAGGGGGACATTTACATCGGAAAAGTCTCTCCCTACCTTAAT470.15514111239478462No Hit
TTACATGGGGGGGAATTCCAATGATAGGCTAGTCTCGCGCAGTACA470.15514111239478462No Hit
TTTTCAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC440.14523848819937285No Hit
TTAGCTGGGATTCTCTCAAATCCACATGTGTGCCCTGAGTGCTGTG440.14523848819937285No Hit
GCTATCGGGGGGAATTCCAATGATAGGCTAGTCTCGCGCAGTACAT430.1419376134675689No Hit
ACACTTGGGGCCTCCTGGTGGTCCTCACATGTCCTAGACTGGCTCA420.13863673873576499No Hit
TCAGCTGGACACACTGAAAGCGTGCTGTCTTCCAGGCACCTACGGG410.13533586400396105No Hit
GTTTGGGGTGACGAGTGGAGCATCATCAGTGAGGGAAAGATAGAGT410.13533586400396105No Hit
GCAAACGGGACATGGTGGGCATGATAGCCAGCTTTTACAACACGGA400.13203498927215712No Hit
GCGCATGGGGAATCAGAAATTGTGGCTGGAATCCCACGCACTGACC400.13203498927215712No Hit
GACTAAGGGGACTGTAACAGACTAATTCAGATTGTCAAAGCTGCTC390.1287341145403532No Hit
TATGCAGGGGATCCGGGTGAACATGGAGGACCTGCGCGAGCAGACC390.1287341145403532No Hit
AGCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGT390.1287341145403532No Hit
GACCGGGATAGGGGGAGGTGGACGCTTTTTCTATGTAAACAGAAAT380.12543323980854926No Hit
TATCTGGGGGGGAATTCCTCTGTGTCATGATCGTGAGTTGTCGCAG380.12543323980854926No Hit
TCCACAAGGGAGACTGGAAGCGAGGCTGTGCTGCTGGGATGCCAGC380.12543323980854926No Hit
TCAATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCT380.12543323980854926No Hit
TTAAATGGGATGCCACAACTAGATACATCAACATGATTTATCACAA380.12543323980854926No Hit
TCTACTGGGGAGTCTCCAAGATGGCCGCGTGGGGAAGGAGGCGTCT380.12543323980854926No Hit
ACGCTAGGGATCCAAGGGCAATGGCACTATACCCTCCCAACCTAGA370.12213236507674534No Hit
CTTCATGGGATTGTAAATGTGGCTGGTATTTACAGCAAATACTGTG370.12213236507674534No Hit
TCCGCAGGGGCCCAGCGAGCATGTATGTAAGGATGACCTTCCCGAC360.1188314903449414No Hit
AAATGGGGACCGAGGTGAAGGTCTCTTCCTGGGATGCAGTCCTGTC360.1188314903449414No Hit
CCCAACCGGTGTCTTGCCCTGGCCCCAGGACATCAACTGGCACAGA360.1188314903449414No Hit
CTGCCTGGGCCTGATTGGCCTGGGTGTGACGGTGTGTAACTAAAAT360.1188314903449414No Hit
CACACAGGGGAGAGCTAACACTGTAGAGTCAAGACCGAGACCACTT360.1188314903449414No Hit
TTCAATGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA360.1188314903449414No Hit
ACGCTTGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCTG360.1188314903449414No Hit
CATTCAGGGGGGAATTCGGGGAATTGGATTTGCAGAGCATATTAGC360.1188314903449414No Hit
CGACCTGGGAGAAAGAGAGCTCTGACGCCAGTGGCAATGGACTATT360.1188314903449414No Hit
CACTCAGGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGC350.11553061561313747No Hit
GGTGTGGGAGGGAGCACAGTGCCTGTATAGACAAAGCGGGGCGGAG350.11553061561313747No Hit
TACGTAGGGGAAGTGGTGTGCACTGAGTCACCTGGAGAGAACCAAG350.11553061561313747No Hit
TCAAATGGGGCCACGCGCCCGCCGGCCTCAAGGGCCGCTACATTGG350.11553061561313747No Hit
TCAATGCGGGGGGGACCCAATTCTCTACCAGCATCTGTTCTGATTC350.11553061561313747No Hit
AGATTTGGGATGGAGTAACAGTCAAAAGGCACCATTTTTAATGTTA350.11553061561313747No Hit
GACGCAGGGGGGGAGAAGCCGTACGTATGCACCCACTGTCAGCGGC350.11553061561313747No Hit
ACTACGGGGGGAATTCGCCCTAAGTTCCGGTCCGCAATTTCGTTTC350.11553061561313747No Hit
ATACCTGGGACCGCAACCTAAACACAACTTTCTTTGATCCCGCTGG350.11553061561313747No Hit
AATGCCGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCT340.11222974088133356No Hit
GCAATGCGGGACCTGTTTATTGCTGCGTTTGTGGGTGCTGCGGCCA340.11222974088133356No Hit
GTGCATGGGGAACTCCAGAGTGATGTTCTGGGGCAAAGAGCTACTA340.11222974088133356No Hit
CTATTGGGGGGGAATTCCTCTGTGTCATGATCGTGAGTTGTCGCAG340.11222974088133356No Hit
CTGGACGGGATGACAAACATACGAAAAACACACCCATTATTTAAAA340.11222974088133356No Hit
ATTTTTGGGGGGAATTCAGATGTATATATGATGTCCTTGGACGGGG340.11222974088133356No Hit
TGTTCTGGGATGACAAACATACGAAAAACACACCCATTATTTAAAA340.11222974088133356No Hit
CGTAGCGGGACCAAGAAGACGTCAGTCGGCCCCAACCTGAGACGCA340.11222974088133356No Hit
ACTGCTGGGGAGAGCTGTCCAGACTGGAAGCGAGGCTGTGCTGCTG340.11222974088133356No Hit
TCAACAGGGATGATATTACAGTAAGTTGGAATGTTCCCACATTCAT340.11222974088133356No Hit
TACTCCAGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGC340.11222974088133356No Hit
TCAATTGGGTCAGCAGGGGGAGAGTGAGAAAACTAAAGAAAGTCGG340.11222974088133356No Hit
CTCGCGGGATGGCAGTTGGCTTTTGAAACGATGAGCGTTATATCCG340.11222974088133356No Hit
GCGACTCGGGATGACCCACCAAACTCATGCATATCACATAGTTAAT330.10892886614952964No Hit
CGATAAGGGGAAGGCTGAGTGGCTGAGGTGTTCTGACTTCATCTTG330.10892886614952964No Hit
CATTCTGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA330.10892886614952964No Hit
ATGTTTGGGACTTATCAGGAACTGTGGAACCATGGAGAACATGACC330.10892886614952964No Hit
TCTATTCGGGGAACGGAGCCCTGGTGACAGGATGTTGGTGTTGGTA330.10892886614952964No Hit
GCGCCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGAC330.10892886614952964No Hit
TAAGTAGGGTACTACAGTCCAGAAGAAGTTAAACTGGTGGCAGAAG320.10562799141772569No Hit
TCACCTGGGCCAGCGTCTTTGTCCCACAGCTGGCCCAGGGTGGAGT320.10562799141772569No Hit
GTTTATGGGCGATCTTCTATGGGGGGAGATCTCATGGCAGTGAACA320.10562799141772569No Hit
CAAATAGGGGTTTCCCCCCGTGGTATTTCCTTCTAGGCATCGGGAA320.10562799141772569No Hit
TAGCCGGGGGCAAGAAGGGGAGCTGGACCACGGGCTGGGCCTAGGG320.10562799141772569No Hit
TTAGCTGGATACTTAGTTTTTTAATTAATGATCTATACATTCTGTT320.10562799141772569No Hit
TACTTTGGGGGTAAAGCAACGCGGAGTCTACGCCGCTTCCAGGGCG320.10562799141772569No Hit
CGTTCTGGGGTCCTTCTCCACCACAAGTGGATTCCTTGTCGCCTAA320.10562799141772569No Hit
AACTGTGGGGTGGCATCTGGTGCCTTTAATGGCTTAGACAGAATCA320.10562799141772569No Hit
CGTCATGGGGAGAAGATCTGGTTTGACAAGTTTAAATATGATGATG320.10562799141772569No Hit
GCCACGGGAGGCTGTTTGCAGGTGAGTGTGTTTGCCTCTGGTCCCC310.10232711668592177No Hit
AAGAATGGGATTTGTCCACCTCCCCAGTCAGGAGCTCCGGCCCCGG310.10232711668592177No Hit
GCACTTGGGGAAATGGATTCGAGTCAACCGCAGACCCCGAAAACGC310.10232711668592177No Hit
TGCTATGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCT310.10232711668592177No Hit
AAAGCTGGGGAAGATGCTGACAATGAAGATGCTGGCCCTGTGCTTG310.10232711668592177No Hit
GTCTACGGGCTATCTCCTAGGTTCAAGGACTTCATAAAAAGAACCT310.10232711668592177No Hit
GAAGCTGGGGTTCCTCGGAGTGTGGGTCTGGCACACAACACAGAGA310.10232711668592177No Hit
ATGCTAGGGGGGAATTCGAGCTCGCATTTTTAAAAATTCTATGGAA310.10232711668592177No Hit
GCGACAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC310.10232711668592177No Hit
CTATCAGGGACCAACCATATGCATACGCCAAGGATCCTGTCCCTCT310.10232711668592177No Hit
CTACAGGGGGAGATGACAGCAGGAGCATCAAGAGAAGCCTGTTTCT310.10232711668592177No Hit
TTTCGTGGGGGAGCCGGAATTAAATGCTGCAGGAAAAGATTCGAAT310.10232711668592177No Hit
CGCCATGGGGGTCTTCTTCAGCTTTGAATGGGTGGTGCCTGTGGCC310.10232711668592177No Hit
TGTAAGGGGATGGCCATGTAACTTTAATGAGAGCCCAGAGGAATTA310.10232711668592177No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)