FastQCFastQC Report
Sat 31 Dec 2022
SRR5843205.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843205.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27512
Sequences flagged as poor quality0
Sequence length46
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGCTGGGGGGGATCATGGGGCTTCTGACCATTCTGAAGAAGATG470.17083454492585054No Hit
TCACCCGGGGGGAATTCCAATGATAGGCTAGTCTCGCGCAGTACAT440.159930212271009No Hit
TACCATGGGGCAGATGAGACCTGATAACTCAAAGCCTCCTGTGTAT420.15266065716778135No Hit
ACACTTGGGTGTGCCTGCGGTTTGCAGACATGGAGTGCAAGCTCGG420.15266065716778135No Hit
CACACAGGGAGAGCCGGTTTGCAGGCAACGCTGTGGGGATCGGGCT410.1490258796161675No Hit
GCTATGGGAGCTGAGTGGCTACATCCTGACAAGGTTTGATGTGCCC400.14539110206455366No Hit
GAAACGGGGGGTGCACCCCGTGGGTCATGGTGCTGGGTCGCGGGTC390.14175632451293982No Hit
CCCTGTGGAAATTCGAGACCAGCAAATACTATGTGACCATCATTGA390.14175632451293982No Hit
TCATTTGGGGAGGAACCGTCTCGTAGCTTGAGGTCTGGGCGGGAGC390.14175632451293982No Hit
TGTCTGGGGATAGCGGTGCTGTGGATAGGTTCCAGACACTGAAGTG380.13812154696132595No Hit
GTGTAAGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC370.1344867694097121No Hit
AATTGGGGGCGGACCGCCCAGGGGCGTGCTCCCGGAAGCTGCCCGC360.1308519918580983No Hit
TCGAAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC360.1308519918580983No Hit
GTGGGTGGGCTTTTACGACGGAGCCTAAGATATTCTTTGTCTTGTC360.1308519918580983No Hit
TTCGACGGGTATCTCATCAATAATTACCCTATTTATCTTATTTCAA360.1308519918580983No Hit
GCTCAAGGGGGGGTCTGGGGCGGAGCGCCCCACCAACACCTCGCCC360.1308519918580983No Hit
TAACCTGGGGAACAACCGCCGCATACGGCCGATTGTCGCAGCCCGG350.12721721430648444No Hit
ATTCATGGGGCTCTTCCGATCTGTCTGCGGGCTCCTTCTGCCCAGT350.12721721430648444No Hit
AAGATGGGGAGCTTGAAGCTGATCTCCTCATCTTTAATGATGAACT350.12721721430648444No Hit
CCTAGAGGGGTGTGCAGAGGCCTTCCTGCTCTTGATAGAAAGGACG350.12721721430648444No Hit
GAAAAAGGGGGTGCGTCCTCACTCTGAGTACCCCTCTGTCTACGCA350.12721721430648444No Hit
ATCCATGGGGCTCAGACCCTGGAGGCTAAGGACTTGTTTCGGAAGG350.12721721430648444No Hit
TATTCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC340.1235824367548706No Hit
ATATTAGGGAGTGGCCTCTTGTTAGAAGAAGAGGAAGATGGCAAGG340.1235824367548706No Hit
ATAGCCGGGGGAACCGCTGTGGCTCAGAGTCCCTCGGCTAGCTGCA340.1235824367548706No Hit
ATGGTTGGGGGCACAGGGCCCGGTGGAGCTGGGAATGTCCCGGGCG340.1235824367548706No Hit
CACAATGGGGAAAAGTATAAGACTAACCCTCAGGCCTCATGTTCTC340.1235824367548706No Hit
AAGCTAGGGGTTGGGACCCAAGGGCAGAGGGAGTTTGGTTCAAGAT330.11994765920325676No Hit
TGCTTAGGGGTCAGCGAGAGGAAGAGGCCCGAACGGCTGGGTGAGG330.11994765920325676No Hit
CTCATCCGGGGATTCCCAAGATGGCGGACCTACTGGGCTCCATCCT330.11994765920325676No Hit
ATTAAAGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA330.11994765920325676No Hit
CTATGAGGGGCTTTTCTAAGATGGCGCAGGCGGAAGGAGCCTATCA320.11631288165164291No Hit
TGTAGTGTGTCTTTGGAATGTTCTAGTCAGTTTCCTCTCCCTCTGT320.11631288165164291No Hit
AAGCAAGGGGAATAGTATGAGCAATAATGTCTATTGGCTTTCTAGG320.11631288165164291No Hit
AACGTCGGGGCAGGAGGAACTCCCTGCTTTAGGAGGAAGCTGGAAC320.11631288165164291No Hit
ATACATGGGGTTTCCTTTCAGCGGCGCGCGGCTGCAAGATGGCGGT320.11631288165164291No Hit
CTTAAAGGGACCTATGAGGAGACCAACAGCACCATCTTGTATGCAC310.11267810410002907No Hit
GTCCTAGGGTATTTGCAAGTTGAGATAATTTGACTTTTTGGTTTTT310.11267810410002907No Hit
TCTACAGGGGATCTTTGTGCGGGGAGGTCGGGGACCGGCTCCAGAG310.11267810410002907No Hit
TGACAGGGGGGCACAAAGCTTGTTCCGTTAGCTGGCATAAGATTCC310.11267810410002907No Hit
ATTTGAGGGGACCGCGGAGCAGCTCGCCTGCCCTCCCCACGAGCAG310.11267810410002907No Hit
CGCTTAGGGGTGCTCGGTGAGAGGACACAGTCAACCAGAGCAGGGT310.11267810410002907No Hit
CACCGAGGTGCAGCTGTGAAGGTTCCTCCATATCAGCTCGTGGGTG310.11267810410002907No Hit
ATCTCCGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCT310.11267810410002907No Hit
TGTTTGGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC310.11267810410002907No Hit
CACAGAGGGCGGGCGAAGGCATGGACGAGATGGAGTTTACGGAAGC310.11267810410002907No Hit
ACACGCGGGAGAGTATGTGCCCAGATGATAGGCCCACCCTGATTTC310.11267810410002907No Hit
TGGATTGGGGGGAATTCCAATGATAGGCTAGTCTCGCGCAGTACAT300.10904332654841523No Hit
ACCACTGGGGGGGCCCGTGTGGACCACCAGACAGGCCCCATCGTGT300.10904332654841523No Hit
CATGTTGGGGAGAGACAGATACGGGGCGGAGTGTGTGACTATCTGG300.10904332654841523No Hit
ACTCTTGGGAGACTGGAAGCGAGGCTGTGCTGCTGGGATGCCAGCT300.10904332654841523No Hit
TCAGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCGGTCAAAAGAAT300.10904332654841523No Hit
TATCTAGGGAGCCTAAAACAGTAGGAAACTGAGTTTTATATGCTTC300.10904332654841523No Hit
CAAGTCGGGCATCTCCTGAAGACCAGGATGTGCTTCCTTCTCAAAG300.10904332654841523No Hit
CCCCATGTTTGTGATGGGTGTGAACCACGAGAAATATGACAACTCA300.10904332654841523No Hit
GATAATGGGGTGGTCAATCCCTGAAGATGGCGGGCAGCAGGAGGCT300.10904332654841523No Hit
TCCAAAGGGGGGGTTGCGGTAGAACATGGCGCAGGGACAACGCAAG300.10904332654841523No Hit
TGTTGCGGGCCCGGGCGGCGCGAACGGCCCAGCCATGTCCGCAGCC300.10904332654841523No Hit
CATAGTGGGGGAGGGGTGGTATTCAACAAGTCAAAGTCTGTGGTAT300.10904332654841523No Hit
AACTAGGGGCCTGTTGCCCTTGCTAAACATGGCGCTGGCTAGCGTG300.10904332654841523No Hit
TTCATTGGGTACCCTGGATACCCCGATGAACAGGAAATCAATGCCT290.10540854899680141No Hit
GAATTTGGGTAATCAGAGTGCGGCTGAGCTGCCGGACAGCCAACCC290.10540854899680141No Hit
AGTTCCGGGGACCCCGCCATGTTCTCCTTGGCGCTGCGGGCCAGGG290.10540854899680141No Hit
ATTCGCGGGGAGCAGCCCGGCGGGGCCAGGCCGCGCGAACATGGCG290.10540854899680141No Hit
GCTCATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAA290.10540854899680141No Hit
ATCCCCTGACCGCAATTGGAAGAGCAAAGAATGGCCGGAGTTTGTG290.10540854899680141No Hit
TTCTTGGGGGGAAGGAGTTGACCAGCCAACCGACTCTGCATTCATC290.10540854899680141No Hit
ACGCCTGGGGCGGCAGCAGAGGTGTTAGCGGCGGCTGCAGCAAGAG290.10540854899680141No Hit
TCTGCTGGGTCCAGGGAAGCAGTTGATTGGATTGTGGTCTTGGTGC290.10540854899680141No Hit
GGGCTGGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAG290.10540854899680141No Hit
CATTATGGGGCAATGGTAGGTACTCAAAATAGAAGTTTCATAAGTA290.10540854899680141No Hit
TTTAGAGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA290.10540854899680141No Hit
ACACAAGGGGTCTTTGGAGGTGCAGGTAATTTCTTGCACAGGGGTT290.10540854899680141No Hit
GAGGCACGGGGACCGGAAGTGCATGTGCTGCCGATGTGGTGTCTAC290.10540854899680141No Hit
TTCTCTGGGGACAGGCAAAACCATCACCCTGGAGGTCGAGCCCAGT290.10540854899680141No Hit
TGACCTGGGATAGACGGCAGCATGTAACCTCTGAATCCTCCCGCTC290.10540854899680141No Hit
TATCTTGGGACACCAACATCGTTACGCTTACACACCGGACGCTTGG290.10540854899680141No Hit
GTTAAAGGGACGTTCTAACACTGCCTTTCAGAGCTCAGATCTCACT290.10540854899680141No Hit
TTTGTGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTT290.10540854899680141No Hit
TACGCAGGGTATGGCCTACCCATTCCAACTTGGTCTACAAGACGCC290.10540854899680141No Hit
CTGACTGGGGGAGGCAAAGCAGCTATGGAAGGGCTTTTGCTGGTTA290.10540854899680141No Hit
TGCTTAGGGGTTTGCGACGGTCTATAAGGCCAGGGACAAGAACACC290.10540854899680141No Hit
GTGTGAGGGGAGTCTAGCAGGAGTTGTGCTGGCTGTGCTGGCGTTG290.10540854899680141No Hit
TCGGAGGGGTAGCAGAATCAAAGTAAAATTACTCCTGTCAGAGTAA290.10540854899680141No Hit
GCTGTTCTGATAATGTGAAGTCAGATGAGGGTTCCCAGGTTATGTG280.10177377144518757No Hit
AATCTAGGGGCACTGCGCAGAGTGGAGGTCGTTGGAGTCACTCGTC280.10177377144518757No Hit
CTAAGTGGGATCTTTCTGGGTTACATCTAGGTTACATATGGGTCTG280.10177377144518757No Hit
TAGTGAGGGGACACACGTTGCCGGCGCACGCACACACGGGCGGACA280.10177377144518757No Hit
TAGTGAGGGGAGACTGGAAGCGAGGCTGTGCTGCTGGGATGCCAGC280.10177377144518757No Hit
CACAAAGGGATAATAGCATTTCTTATTAAAATACCATTATATGGAG280.10177377144518757No Hit
TCACACGGGGCCTTTCCGCTCGGCCGTTCTCCTGTATAGGAGGCAG280.10177377144518757No Hit
TGCACAGGGGGCTGTTGAGTTGACGGCTCCTTGGGTTTGCGCTCAC280.10177377144518757No Hit
TCACCCTGCTGCATTGTGACAAGCACCTATGGCTGGACAGCCAACA280.10177377144518757No Hit
ACAGCTGAGCCAGCCTGTCACCCCCACCCTCCTCACCAAATGCTGG280.10177377144518757No Hit
GAGCCAGGGCGATGAGGGGGGGCGACCTCTTCCTGCGTTCTCACGG280.10177377144518757No Hit
CAGCTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGC280.10177377144518757No Hit
GCAGCCGGGGGAGGGCCCGCTATCCACAGGAACCTTTCACAACAGC280.10177377144518757No Hit
GGTTTTGGGGTGGAAGAGTTACCTGAGTGGAACTTTGATGGCTCTA280.10177377144518757No Hit
GTTAGGGGAGGGGGCTACGGGATCATGGGGCTTCTGACCATTCTGA280.10177377144518757No Hit
TCTTATGGGAGACCGCAGGGATGGCGGCAGGGCAGGGTGGGTGGCT280.10177377144518757No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)