FastQCFastQC Report
Sat 31 Dec 2022
SRR5843132.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843132.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57683
Sequences flagged as poor quality0
Sequence length46
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAGCGGGGAGACGAGGTTGGCGAGAGGAGACTGAGGACCTCATAA720.12482013764887401No Hit
ACATGTACCAAGTCCCAGACAAATTTGACTGACTGTCCTTTCCATG650.11268484648856683No Hit
CTGCCGGGATGACCCACCAAACTCATGCATATCACATAGTTAATCC640.11095123346566578No Hit
ATTTGTGGGATGCCACAACTAGATACATCAACATGATTTATCACAA590.10228316835116065No Hit
TACAACGGGGAAGAGGATAATCCATTTGCAGAGTACATGTGGATGG580.10054955532825963No Hit
ACTTAAGGGGTTCATCTCAGGTTTGTCTTTCTCCTACTAGAACATG580.10054955532825963No Hit
TATTTCGGGGGTAGAGGAAGCCAGCCAGCCCCATCCCTCCACCTGC580.10054955532825963No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)