FastQCFastQC Report
Sat 31 Dec 2022
SRR5843057.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843057.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67390
Sequences flagged as poor quality0
Sequence length46
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCTGTGGGACTTAAAAAAGAAATTTAAGAAAGAAATTAAGAGTTG760.11277637631696097No Hit
TCTACAGGGTATGCCACAACTAGATACATCAACATGATTTATCACA740.10980857694019884No Hit
TCACACGGGCAAATCCAGTTGCTCTAAATCTCCAGTGGATCTGTTG710.10535687787505564No Hit
CGAGCTGGGGGGTCCTAACTTCCGGGATTCGGTGGGCCTGTTGCGG690.10238907849829351No Hit
CTTCTAGGGGGACAGTGAAGGCCTAGCTGATGATCTGCCCCAGAGC680.10090517880991245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)