SRR5843043.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR5843043.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	254514
Sequences flagged as poor quality	0
Sequence length	46
%GC	54

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTACAG	30	4.852569E-6	40.000004	1
GGGTCTA	30	4.852569E-6	40.000004	7
TCGATTT	30	4.852569E-6	40.000004	14
ACGGGTA	30	4.852569E-6	40.000004	5
CACAACG	30	4.852569E-6	40.000004	1
TATACGG	30	4.852569E-6	40.000004	2
TCAACGG	30	4.852569E-6	40.000004	2
CTCGTAC	20	0.0012539279	40.0	29
TTTACTC	20	0.0012539279	40.0	26
TTACTCT	20	0.0012539279	40.0	27
GATCACG	20	0.0012539279	40.0	1
CAACACG	20	0.0012539279	40.0	1
GCCGAAA	20	0.0012539279	40.0	31
AGTTAAT	90	0.0	40.0	39
ATAACAG	20	0.0012539279	40.0	1
CGTTTTA	20	0.0012539279	40.0	12
CTCTATG	20	0.0012539279	40.0	1
AATACGG	20	0.0012539279	40.0	1
TACGTGA	20	0.0012539279	40.0	21
TCAAACG	20	0.0012539279	40.0	1