SRR5842311.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR5842311.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75029
Sequences flagged as poor quality	0
Sequence length	46
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGGGGA	30	4.8068523E-6	40.000004	5
TAAAACG	30	4.8068523E-6	40.000004	21
AAAACGA	30	4.8068523E-6	40.000004	22
CAGATAA	30	4.8068523E-6	40.000004	17
TCAGATA	30	4.8068523E-6	40.000004	16
AACGAAT	30	4.8068523E-6	40.000004	24
CTCCTGG	30	4.8068523E-6	40.000004	2
ACGAATA	30	4.8068523E-6	40.000004	25
TCTGCAC	20	0.0012482798	40.0	13
TTCTAGG	20	0.0012482798	40.0	2
CGGGTGT	20	0.0012482798	40.0	6
TTGTGGG	20	0.0012482798	40.0	3
CAAGTAT	20	0.0012482798	40.0	34
TTCAGAT	40	1.8873834E-8	40.0	15
CGACGTT	20	0.0012482798	40.0	27
GGCACCG	20	0.0012482798	40.0	8
TTTCGCG	20	0.0012482798	40.0	1
TATGGGC	25	7.725098E-5	40.0	4
CGCATGG	20	0.0012482798	40.0	2
TGGGTAC	20	0.0012482798	40.0	6