SRR5841605.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR5841605.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15583
Sequences flagged as poor quality	0
Sequence length	46
%GC	54

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAACTGTCTCTTATACACATCTGACGCTTGGTACAATCTCGTAT	47	0.3016107296412758	No Hit
AAAGCTGGGGCTCTTCCACAGGAGGCCTACACGCCGCCGTCTGTGC	17	0.10909324263620612	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAACTGT	20	0.0012179628	40.000004	3
CGGGGAA	20	0.0012179628	40.000004	6
ATAGGGA	20	0.0012179628	40.000004	4
AGCAGAG	20	0.0012179628	40.000004	38
AATAGGG	20	0.0012179628	40.000004	3
CTGTGGG	20	0.0012179628	40.000004	3
AAAACTG	20	0.0012179628	40.000004	2
GGGAAGA	20	0.0012179628	40.000004	8
ACAGGGC	20	0.0012179628	40.000004	4
CAGTGGT	20	0.0012179628	40.000004	28
ATCTGGG	20	0.0012179628	40.000004	3
CTCGTAT	20	0.0012179628	40.000004	40
TATGGGA	40	1.7271304E-8	40.000004	4
ACTGTCT	25	7.445342E-5	40.0	5
ATGGGAG	45	1.0641088E-9	40.0	5
AAACTCA	25	7.445342E-5	40.0	20
TGCATAT	25	7.445342E-5	40.0	27
CACATAG	25	7.445342E-5	40.0	34
AACTGTC	25	7.445342E-5	40.0	4
TGACCCA	25	7.445342E-5	40.0	11