SRR5841590.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR5841590.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	54171
Sequences flagged as poor quality	0
Sequence length	46
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTCCATGGGCACCGTCCTGCTGTCTATATCAACCAACACCTTTTCT	64	0.11814439460227798	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTCAC	20	0.0012452035	40.000004	7
ACGGGAA	40	1.8706487E-8	40.000004	5
GGATTAA	20	0.0012452035	40.000004	8
TATCGCG	20	0.0012452035	40.000004	1
CAATAGG	20	0.0012452035	40.000004	2
ATCGCGG	20	0.0012452035	40.000004	2
GTAACAG	20	0.0012452035	40.000004	1
TTGGGGT	20	0.0012452035	40.000004	5
GGATCTC	25	7.69658E-5	40.0	8
TCACTGG	30	4.7820376E-6	40.0	2
AAGGGAC	70	0.0	40.0	5
GGATTTC	30	4.7820376E-6	40.0	8
TGGGAGT	30	4.7820376E-6	40.0	6
TTTCTCG	25	7.69658E-5	40.0	1
TTCTCGG	25	7.69658E-5	40.0	2
ATGGGAG	90	0.0	37.777775	5
AATAGGG	75	0.0	37.333332	3
CACGGGA	70	0.0	37.142857	4
ATAGGGA	135	0.0	37.037037	4
TAGGGAG	60	1.2732926E-11	36.666664	5