FastQCFastQC Report
Sat 31 Dec 2022
SRR5841516.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5841516.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23909
Sequences flagged as poor quality0
Sequence length46
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCTGGGGGTGGACGGTGGCACGGCCAATGCGGGCAGCGATGTCA320.13384081308293946No Hit
TAAAGTGGGTGTCACATGACAGATGCCATGAAGAAGTCAACCGATA270.11292818603873017No Hit
CACAAAGGGAGTGGGAGCTTTTGACCTTGTACTGAACCTTGCCCTA260.10874566062988832No Hit
TATAACGGGCGATCTACGTTTGGGACTTCTGATTCTGACAGACTCA240.10038060981220462No Hit
AATCTAGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGT240.10038060981220462No Hit
AATAATGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGT240.10038060981220462No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)