##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633516.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 644547 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.846388238561346 33.0 33.0 33.0 33.0 33.0 2 31.978588062623828 33.0 33.0 33.0 33.0 33.0 3 31.69977829390254 33.0 33.0 33.0 27.0 33.0 4 31.97641754596639 33.0 33.0 33.0 33.0 33.0 5 32.082007983901875 33.0 33.0 33.0 33.0 33.0 6 35.24832479245113 37.0 37.0 37.0 33.0 37.0 7 35.39164095093143 37.0 37.0 37.0 33.0 37.0 8 35.508451672259746 37.0 37.0 37.0 33.0 37.0 9 35.61772842011521 37.0 37.0 37.0 33.0 37.0 10 35.630265907684 37.0 37.0 37.0 33.0 37.0 11 35.63828239057819 37.0 37.0 37.0 33.0 37.0 12 35.642429489238175 37.0 37.0 37.0 33.0 37.0 13 35.64678603732544 37.0 37.0 37.0 33.0 37.0 14 35.6205009099414 37.0 37.0 37.0 33.0 37.0 15 35.639942471223975 37.0 37.0 37.0 33.0 37.0 16 35.618724468502684 37.0 37.0 37.0 33.0 37.0 17 35.62283898614066 37.0 37.0 37.0 33.0 37.0 18 35.60427400949814 37.0 37.0 37.0 33.0 37.0 19 35.58998955855818 37.0 37.0 37.0 33.0 37.0 20 35.59444074675702 37.0 37.0 37.0 33.0 37.0 21 35.58445388776924 37.0 37.0 37.0 33.0 37.0 22 35.50012799687222 37.0 37.0 37.0 33.0 37.0 23 35.54597725224072 37.0 37.0 37.0 33.0 37.0 24 35.5379871444596 37.0 37.0 37.0 33.0 37.0 25 35.54836652718886 37.0 37.0 37.0 33.0 37.0 26 35.440084276243624 37.0 37.0 37.0 33.0 37.0 27 35.47224484793196 37.0 37.0 37.0 33.0 37.0 28 35.49459853199224 37.0 37.0 37.0 33.0 37.0 29 35.4907632802573 37.0 37.0 37.0 33.0 37.0 30 35.48794114315946 37.0 37.0 37.0 33.0 37.0 31 35.48323551269341 37.0 37.0 37.0 33.0 37.0 32 35.47192834657519 37.0 37.0 37.0 33.0 37.0 33 35.46775952723385 37.0 37.0 37.0 33.0 37.0 34 35.44114858962961 37.0 37.0 37.0 33.0 37.0 35 35.38350034985812 37.0 37.0 37.0 33.0 37.0 36 35.39851399510044 37.0 37.0 37.0 33.0 37.0 37 35.39845348748811 37.0 37.0 37.0 33.0 37.0 38 35.38541332129387 37.0 37.0 37.0 33.0 37.0 39 35.27773459499463 37.0 37.0 37.0 33.0 37.0 40 35.077874848537036 37.0 37.0 37.0 33.0 37.0 41 35.22872653196741 37.0 37.0 37.0 33.0 37.0 42 35.281293683781016 37.0 37.0 37.0 33.0 37.0 43 34.94019520686622 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 5.0 15 11.0 16 31.0 17 23.0 18 22.0 19 23.0 20 40.0 21 120.0 22 310.0 23 693.0 24 1474.0 25 2681.0 26 4326.0 27 6344.0 28 8867.0 29 12242.0 30 15686.0 31 20049.0 32 25574.0 33 33820.0 34 48856.0 35 99237.0 36 364113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.53916937011576 21.447000761775325 14.204549862151246 23.80928000595767 2 15.42618304018171 22.490679500486387 39.65125894620563 22.431878513126275 3 17.324725737611065 27.92084983717246 31.161265198658906 23.593159226557567 4 12.189646371792904 18.36049194240296 40.50395083678925 28.94591084901489 5 12.98276153639688 38.18464751212867 35.801888768390825 13.030702183083623 6 27.843431122943713 41.03409060937371 18.115203390908654 13.00727487677392 7 25.04596251320695 33.20502616566364 24.269913598232556 17.479097722896856 8 23.670112497614603 36.38865746020073 21.30705751481273 18.634172527371938 9 25.374410244714507 16.02877679982996 20.879160092281865 37.717652863173676 10 14.384521221881414 28.779127045816676 34.5901850446903 22.24616668761161 11 32.26343462928227 24.6885021573291 25.08459429645937 17.963468916929255 12 21.969693443612336 26.598060343155737 30.940645135265544 20.491601077966386 13 26.989342902844943 23.031679613744227 27.485505323894145 22.493472159516685 14 21.365082763553318 22.039199623921917 28.768266705143304 27.82745090738146 15 23.124923395811322 29.514527257127877 25.705495487528452 21.65505385953235 16 22.014841431268785 29.643299867969287 25.897413221999326 22.444445478762603 17 21.614560303593066 28.436871166881545 27.24347487460185 22.705093654923537 18 21.58865063370088 28.246815205097537 28.978647018758913 21.185887142442677 19 23.759167291136254 27.167297342164343 28.94218730364116 20.13134806305824 20 23.481608013069643 26.74079624914863 29.011383188502933 20.766212549278794 21 21.854108389302876 27.956068370498972 28.41127179243717 21.778551447760986 22 21.45150004576858 28.028832653010564 28.438267496396698 22.081399804824166 23 21.565533622838988 27.83024356641176 29.016968506563522 21.58725430418573 24 22.21529229055445 28.175602399824996 27.901456371684297 21.707648937936256 25 22.314897129301663 27.496520812291426 28.702639217931353 21.48594284047556 26 22.074728452696235 27.73994759109886 28.627547719561182 21.55777623664372 27 22.07457330497233 27.707211421354845 28.05148422070074 22.16673105297209 28 21.374701922435445 27.75809987479579 29.006728756785773 21.860469445982993 29 22.71347163201442 27.864376065670925 28.041865061818612 21.38028724049604 30 22.017789238022985 27.739327000203247 28.751045307789813 21.49183845398396 31 22.204276802157175 27.668424490378513 28.513824437938585 21.613474269525728 32 21.094039689890728 27.687662808142772 28.889437077513353 22.328860424453143 33 21.32552009395746 27.584489571745735 29.252793046899605 21.837197287397196 34 21.740540255404184 27.582627799058873 28.638252912510648 22.038579033026295 35 21.9977751816392 28.252400523158126 28.216716546659903 21.533107748542776 36 22.345150935463202 27.827140611933654 28.18863480863304 21.639073643970104 37 22.402245297860357 27.084138162151095 28.23161072815481 22.282005811833738 38 22.469889705483077 27.59922860551674 28.1552780479934 21.775603641006786 39 21.773586720596015 27.635688320634493 28.544078244100117 22.04664671466937 40 21.830991378440984 28.0066465284921 28.48403607494876 21.678326018118153 41 21.623248576131765 27.48767739202882 28.740495262564252 22.148578769275165 42 21.856125309713644 27.684870149112477 28.384586383925452 22.074418157248424 43 21.80104786772726 27.237579261093448 28.606137333662247 22.355235537517046 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 57.0 2 74.0 3 251.0 4 428.0 5 428.0 6 496.5 7 565.0 8 522.5 9 480.0 10 719.0 11 958.0 12 958.0 13 1495.0 14 2032.0 15 3793.5 16 5555.0 17 6431.5 18 7308.0 19 7308.0 20 7357.0 21 7406.0 22 8553.0 23 9700.0 24 11552.5 25 13405.0 26 13405.0 27 15988.0 28 18571.0 29 21886.0 30 25201.0 31 27444.0 32 29687.0 33 29687.0 34 33467.0 35 37247.0 36 39244.0 37 41241.0 38 43710.0 39 46179.0 40 46179.0 41 48232.5 42 50286.0 43 48917.0 44 47548.0 45 47177.5 46 46807.0 47 46807.0 48 45257.0 49 43707.0 50 44396.0 51 45085.0 52 44319.5 53 43554.0 54 43554.0 55 38980.0 56 34406.0 57 30057.0 58 25708.0 59 22641.5 60 19575.0 61 19575.0 62 17139.0 63 14703.0 64 12068.0 65 9433.0 66 7920.5 67 6408.0 68 6408.0 69 5322.0 70 4236.0 71 3572.5 72 2909.0 73 2366.5 74 1824.0 75 1824.0 76 1386.5 77 949.0 78 778.0 79 607.0 80 446.5 81 286.0 82 286.0 83 226.5 84 167.0 85 155.0 86 143.0 87 109.5 88 76.0 89 76.0 90 57.5 91 39.0 92 25.5 93 12.0 94 7.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 644547.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.459566629803795 #Duplication Level Percentage of deduplicated Percentage of total 1 87.18500987723455 49.22427874283825 2 7.183809928656229 8.111895906456247 3 1.9100908792265454 3.235287097940149 4 0.8867498212032485 2.0026204245676564 5 0.5216832169562615 1.4727004173696219 6 0.34546350641879586 1.1702831915290592 7 0.2392014253800537 0.9453646169932427 8 0.18517667201210686 0.8363995721402296 9 0.15002725473327136 0.7623426406409712 >10 1.1141771139057832 12.998048826349088 >50 0.17374797652876475 6.960188153437839 >100 0.10123676854046555 10.189841621906885 >500 0.0027888916953293964 0.9088569064135065 >1k 8.366675085988188E-4 1.1818918814171484 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3596 0.5579112151635179 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2595 0.4026083435342962 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1315 0.20401925693549114 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 721 0.11186150893573316 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 1.5514772390531645E-4 0.0 0.0 2 0.0 0.0 3.102954478106329E-4 0.0 0.0 3 0.0 0.0 3.102954478106329E-4 0.0 0.0 4 0.0 0.0 3.102954478106329E-4 0.0 0.0 5 0.0 0.0 4.6544317171594936E-4 0.0 0.0 6 0.0 0.0 0.0018617726868637974 0.0 0.0 7 0.0 0.0 0.003102954478106329 3.102954478106329E-4 0.0 8 0.0 0.0 0.003878693097632911 3.102954478106329E-4 0.0 9 1.5514772390531645E-4 0.0 0.00480957944106481 0.001396329515147848 0.0 10 1.5514772390531645E-4 0.0 0.0054301703366860755 0.0018617726868637974 0.0 11 1.5514772390531645E-4 0.0 0.007136795299644556 0.0020169204107691138 0.0 12 1.5514772390531645E-4 0.0 0.007757386195265822 0.0020169204107691138 0.0 13 1.5514772390531645E-4 0.0 0.008377977090887088 0.0020169204107691138 0.0 14 1.5514772390531645E-4 0.0 0.00868827253869772 0.0020169204107691138 0.0 15 1.5514772390531645E-4 0.0 0.009464011158224303 0.0020169204107691138 0.0 16 1.5514772390531645E-4 0.0 0.009774306606034936 0.0020169204107691138 0.0 17 1.5514772390531645E-4 0.0 0.009774306606034936 0.0020169204107691138 0.0 18 1.5514772390531645E-4 0.0 0.009929454329940253 0.0020169204107691138 0.0 19 1.5514772390531645E-4 0.0 0.010394897501656201 0.0020169204107691138 0.0 20 1.5514772390531645E-4 0.0 0.010705192949466836 0.002327215858579747 0.0 21 1.5514772390531645E-4 0.0 0.011325783845088101 0.003102954478106329 0.0 22 1.5514772390531645E-4 0.0 0.011636079292898734 0.003568397649822278 0.0 23 1.5514772390531645E-4 0.0 0.011636079292898734 0.004188988545443544 0.0 24 1.5514772390531645E-4 0.0 0.011636079292898734 0.004499283993254177 0.0 25 1.5514772390531645E-4 0.0 0.011636079292898734 0.004499283993254177 0.0 26 3.102954478106329E-4 0.0 0.011636079292898734 0.00480957944106481 0.0 27 3.102954478106329E-4 0.0 0.011636079292898734 0.006516204404023291 0.0 28 3.102954478106329E-4 0.0 0.011636079292898734 0.015359624666626328 0.0 29 3.102954478106329E-4 0.0 0.01179122701680405 0.03413249925916962 0.0 30 3.102954478106329E-4 0.0 0.01179122701680405 0.05833554418839899 0.0 31 3.102954478106329E-4 0.0 0.01179122701680405 0.11651594065289266 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGCG 25 0.005494575 29.599998 30 GGTATCA 560 0.0 25.4375 1 CCGGCGT 45 1.3223315E-4 24.666666 23 GGCGTCA 45 1.3223315E-4 24.666666 25 GTATCAA 1620 0.0 23.867285 1 CGGCCTT 80 2.7210262E-8 23.125 24 TCGCTAT 50 2.7003186E-4 22.199999 11 CCTAGTA 55 5.139726E-4 20.181818 2 TCGGCGT 55 5.139726E-4 20.181818 11 GCGTCAA 55 5.139726E-4 20.181818 26 CGTCAAA 55 5.139726E-4 20.181818 27 TAACCTA 145 7.2759576E-12 19.13793 5 GTTCTAG 150 1.2732926E-11 18.5 1 CGAGTCG 60 9.230816E-4 18.5 21 CGCTATC 60 9.230816E-4 18.5 12 CGAATTA 60 9.230816E-4 18.5 15 CATCGCT 60 9.230816E-4 18.5 9 TGTCCGA 130 6.9485395E-10 18.5 12 TGAACGT 50 0.0070316126 18.499998 5 GTATTAT 185 0.0 18.0 1 >>END_MODULE