##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633480.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 913411 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.883801486953846 33.0 33.0 33.0 33.0 33.0 2 31.998986217595366 33.0 33.0 33.0 33.0 33.0 3 31.710187418369166 33.0 33.0 33.0 27.0 33.0 4 31.993104965891586 33.0 33.0 33.0 33.0 33.0 5 32.10050459212775 33.0 33.0 33.0 33.0 33.0 6 35.27806431058965 37.0 37.0 37.0 33.0 37.0 7 35.42640498089031 37.0 37.0 37.0 33.0 37.0 8 35.564270629541355 37.0 37.0 37.0 33.0 37.0 9 35.672093942376435 37.0 37.0 37.0 33.0 37.0 10 35.6754057045514 37.0 37.0 37.0 33.0 37.0 11 35.7008181421069 37.0 37.0 37.0 33.0 37.0 12 35.685027879016125 37.0 37.0 37.0 33.0 37.0 13 35.690083653470346 37.0 37.0 37.0 33.0 37.0 14 35.66555143303508 37.0 37.0 37.0 33.0 37.0 15 35.68508590327903 37.0 37.0 37.0 33.0 37.0 16 35.66073760880918 37.0 37.0 37.0 33.0 37.0 17 35.67112066747609 37.0 37.0 37.0 33.0 37.0 18 35.650309663448326 37.0 37.0 37.0 33.0 37.0 19 35.63924892518264 37.0 37.0 37.0 33.0 37.0 20 35.635157667249466 37.0 37.0 37.0 33.0 37.0 21 35.63510073778398 37.0 37.0 37.0 33.0 37.0 22 35.54338080009985 37.0 37.0 37.0 33.0 37.0 23 35.58830252755879 37.0 37.0 37.0 33.0 37.0 24 35.579227751800666 37.0 37.0 37.0 33.0 37.0 25 35.60663053105338 37.0 37.0 37.0 33.0 37.0 26 35.49719239203382 37.0 37.0 37.0 33.0 37.0 27 35.507649896924825 37.0 37.0 37.0 33.0 37.0 28 35.52253914174452 37.0 37.0 37.0 33.0 37.0 29 35.532070448023944 37.0 37.0 37.0 33.0 37.0 30 35.52927105103836 37.0 37.0 37.0 33.0 37.0 31 35.523881363373114 37.0 37.0 37.0 33.0 37.0 32 35.5094377011006 37.0 37.0 37.0 33.0 37.0 33 35.50881804576472 37.0 37.0 37.0 33.0 37.0 34 35.485952106992364 37.0 37.0 37.0 33.0 37.0 35 35.417696962265616 37.0 37.0 37.0 33.0 37.0 36 35.45103244870053 37.0 37.0 37.0 33.0 37.0 37 35.44274811667475 37.0 37.0 37.0 33.0 37.0 38 35.430443688547655 37.0 37.0 37.0 33.0 37.0 39 35.31526771628544 37.0 37.0 37.0 33.0 37.0 40 35.09995500382632 37.0 37.0 37.0 33.0 37.0 41 35.26895231171948 37.0 37.0 37.0 33.0 37.0 42 35.30671187450118 37.0 37.0 37.0 33.0 37.0 43 34.97418248740162 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 6.0 15 20.0 16 40.0 17 35.0 18 25.0 19 24.0 20 60.0 21 132.0 22 350.0 23 849.0 24 1810.0 25 3333.0 26 5591.0 27 8402.0 28 11981.0 29 16474.0 30 21664.0 31 27991.0 32 36084.0 33 48460.0 34 69264.0 35 141815.0 36 519001.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.912895728209975 20.769401726057602 13.836049708181749 23.481652837550676 2 15.853213942026098 21.991195639202942 39.459345245459055 22.696245173311905 3 17.80162489832069 27.91207900933972 30.43000357998754 23.856292512352052 4 11.946976771683284 18.086600664979947 40.894186735215584 29.072235828121183 5 13.49392551655279 37.404519980600185 35.379801644604676 13.721752858242347 6 28.139358952322667 41.08752795838894 17.530334099326588 13.242778989961804 7 25.846524729831366 32.89493995583587 23.582702638790202 17.675832675542555 8 24.462153400823944 35.34859991832811 20.91183486951657 19.277411811331373 9 26.099422932283495 15.276146225521698 20.635508002421695 37.98892283977312 10 14.955261103709065 28.138811553616062 33.74647338383269 23.159453958842185 11 33.094959443229826 24.493355127100504 24.431061154288706 17.98062427538096 12 23.059827394239832 26.26637953779843 30.373183594241805 20.300609473719934 13 27.998677484724837 22.93348777275509 26.299442419677447 22.76839232284262 14 21.922551841394508 21.588310191140682 28.788573818357783 27.700564149107027 15 23.715611044754223 28.934400833797707 25.505166896391657 21.84482122505641 16 22.115017226637296 28.894440728215447 25.79375549451452 23.19678655063274 17 22.1222428895645 27.643306244396005 26.674301053961468 23.560149812078024 18 22.81579705083473 26.90891613961294 28.78167659465454 21.493610214897785 19 24.858907983372216 26.32090044897642 28.34145855480173 20.478733012849638 20 24.404019658182353 26.168066730091933 28.286061805693162 21.14185180603255 21 22.85915102839795 27.10028672744252 28.385469410812874 21.655092833346654 22 22.212454196413226 27.13192637268437 28.500861058165494 22.154758372736914 23 22.3744842135687 26.770862185806827 28.890937376493163 21.963716224131304 24 22.278908399395235 27.180863817054973 27.929486288209798 22.610741495339994 25 22.565088443209028 27.271841482092945 28.530530068063552 21.632540006634475 26 22.71660840519766 27.305561242419895 28.270515682425547 21.707314669956897 27 22.762918335776554 27.05167772229588 28.031302447638577 22.154101494288987 28 22.15224033868653 27.073354711077492 28.522209607723138 22.252195342512845 29 23.201384699768234 27.030000733514264 27.882081560217692 21.88653300649981 30 23.052382771829986 26.701999428515748 28.49889042282171 21.746727376832553 31 22.649716283250363 26.92993624994663 28.25891082984549 22.161436636957514 32 21.394421569260714 26.91449960642033 28.825140051959085 22.86593877235987 33 21.555356789002982 27.084521644692256 29.21959555993961 22.140526006365153 34 22.337151621778148 26.59142488978127 28.709310485641183 22.362113002799397 35 22.25099106535831 27.412413469949453 28.103121157945328 22.23347430674691 36 22.756240071555958 27.09689285546156 28.213476737197162 21.93339033578531 37 22.735110481480955 26.522562132490197 28.22792806305157 22.51439932297728 38 22.727446899588465 26.86348204696462 28.023638865746086 22.385432187700825 39 22.297957874385137 26.784656633213306 28.503707531439844 22.413677960961714 40 22.23183211062709 27.436608492781456 28.432874138804987 21.898685257786475 41 22.25077210587567 26.335789693796112 28.52604139866938 22.887396801658838 42 21.73950171390535 27.384167696688564 28.558118962876517 22.318211626529568 43 22.540893420377024 26.541611607480093 28.31934364705483 22.598151325088047 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 71.0 2 92.0 3 337.5 4 583.0 5 583.0 6 757.0 7 931.0 8 852.0 9 773.0 10 1109.0 11 1445.0 12 1445.0 13 2198.0 14 2951.0 15 5291.5 16 7632.0 17 8968.0 18 10304.0 19 10304.0 20 9999.0 21 9694.0 22 10799.5 23 11905.0 24 14508.5 25 17112.0 26 17112.0 27 20484.5 28 23857.0 29 27149.5 30 30442.0 31 34495.5 32 38549.0 33 38549.0 34 44155.0 35 49761.0 36 53074.0 37 56387.0 38 58869.5 39 61352.0 40 61352.0 41 63378.0 42 65404.0 43 66692.5 44 67981.0 45 66834.0 46 65687.0 47 65687.0 48 65028.0 49 64369.0 50 64198.0 51 64027.0 52 62023.5 53 60020.0 54 60020.0 55 57291.0 56 54562.0 57 47852.5 58 41143.0 59 37476.5 60 33810.0 61 33810.0 62 29856.0 63 25902.0 64 21372.5 65 16843.0 66 14049.5 67 11256.0 68 11256.0 69 9488.0 70 7720.0 71 6448.5 72 5177.0 73 3844.5 74 2512.0 75 2512.0 76 1852.5 77 1193.0 78 936.5 79 680.0 80 555.5 81 431.0 82 431.0 83 376.5 84 322.0 85 298.5 86 275.0 87 219.0 88 163.0 89 163.0 90 122.0 91 81.0 92 53.0 93 25.0 94 16.5 95 8.0 96 8.0 97 4.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 913411.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.8109913947442 #Duplication Level Percentage of deduplicated Percentage of total 1 86.92099498811477 48.51146903304277 2 7.671361751705279 8.562926094207864 3 1.8335088872885894 3.0698984619195144 4 0.8207533517093514 1.8322823299783229 5 0.47230077448629476 1.317978723029281 6 0.33328898497994286 1.116071320360717 7 0.25155649468650954 0.9827732152168561 8 0.19203652934413187 0.857419926936151 9 0.14325573935404606 0.7195720352702745 >10 1.1097908153122502 12.389833902098934 >50 0.1410127332575574 5.562817409652355 >100 0.10257063134204894 10.906914992574453 >500 0.006174154499930314 2.2906055429979215 >1k 0.0011949976451478027 1.2281700705868897 >5k 1.9916627419130044E-4 0.6512669421276664 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5859 0.6414418044013046 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4091 0.44788162174530416 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2302 0.2520223645215571 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 1276 0.13969614992593696 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1209 0.13236100725741207 No Hit GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC 1098 0.1202087559707514 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1073 0.11747176243771972 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 2.189594826425344E-4 0.0 0.0 2 0.0 0.0 2.189594826425344E-4 0.0 0.0 3 0.0 0.0 2.189594826425344E-4 0.0 0.0 4 0.0 0.0 2.189594826425344E-4 3.2843922396380164E-4 0.0 5 0.0 0.0 6.568784479276033E-4 3.2843922396380164E-4 0.0 6 0.0 0.0 0.001532716378497741 3.2843922396380164E-4 0.0 7 0.0 0.0 0.0031749124983167488 3.2843922396380164E-4 0.0 8 0.0 0.0 0.003612831463601818 3.2843922396380164E-4 0.0 9 0.0 0.0 0.0038317909462443523 5.47398706606336E-4 0.0 10 3.2843922396380164E-4 0.0 0.004269709911529421 6.568784479276033E-4 0.0 11 3.2843922396380164E-4 0.0 0.006130865513990964 6.568784479276033E-4 0.0 12 3.2843922396380164E-4 0.0 0.006568784479276032 6.568784479276033E-4 0.0 13 3.2843922396380164E-4 0.0 0.006897223703239834 6.568784479276033E-4 0.0 14 4.379189652850688E-4 0.0 0.007335142668524903 6.568784479276033E-4 0.0 15 4.379189652850688E-4 0.0 0.007554102151167437 6.568784479276033E-4 0.0 16 4.379189652850688E-4 0.0 0.008101500857773773 7.663581892488705E-4 0.0 17 4.379189652850688E-4 0.0 0.008101500857773773 8.758379305701376E-4 0.0 18 4.379189652850688E-4 0.0 0.00821098059909504 0.001094797413212672 0.0 19 4.379189652850688E-4 0.0 0.008429940081737575 0.001094797413212672 0.0 20 4.379189652850688E-4 0.0 0.008539419823058843 0.0014232366371764737 0.0 21 4.379189652850688E-4 0.0 0.009086818529665178 0.001642196119819008 0.0 22 4.379189652850688E-4 0.0 0.009524737494950248 0.002189594826425344 0.0 23 4.379189652850688E-4 0.0 0.009524737494950248 0.00273699353303168 0.0 24 4.379189652850688E-4 0.0 0.009634217236271515 0.0031749124983167488 0.0 25 4.379189652850688E-4 0.0 0.009634217236271515 0.004050750428886887 0.0 26 4.379189652850688E-4 0.0 0.009634217236271515 0.005036068100778291 0.0 27 4.379189652850688E-4 0.0 0.009634217236271515 0.007225662927203636 0.0 28 4.379189652850688E-4 0.0 0.009634217236271515 0.01959687369650683 0.0 29 4.379189652850688E-4 0.0 0.009634217236271515 0.045215133165683354 0.0 30 4.379189652850688E-4 0.0 0.009634217236271515 0.07740217711413591 0.0 31 4.379189652850688E-4 0.0 0.009634217236271515 0.14265210294161118 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1285 0.0 25.914398 1 GACGGAC 50 2.7015136E-4 22.2 7 GTATCAA 3150 0.0 21.436508 1 GTGTATC 45 0.0038252163 20.555555 1 CCACGTT 55 5.141981E-4 20.18182 37 GTACTGG 465 0.0 18.698925 1 TGCGGGT 130 6.9485395E-10 18.5 21 TGTACGC 50 0.0070338026 18.5 34 CGCTTCA 50 0.0070338026 18.5 32 GAAAGCG 145 1.546141E-10 17.862068 34 TATAACT 220 0.0 17.659092 4 ACTATCG 445 0.0 17.460674 11 GGTCGGC 85 2.722124E-5 17.411764 22 GTCGCCC 245 0.0 17.367346 37 TTGTCCG 75 2.0666813E-4 17.266666 13 TCGGCTC 75 2.0666813E-4 17.266666 24 AAAGCGT 140 1.8681021E-9 17.178572 35 GTCGGCT 65 0.0015795982 17.076923 23 ACGGTAC 110 7.8032826E-7 16.818184 3 TCTGCGG 155 4.0017767E-10 16.709679 19 >>END_MODULE