##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633472.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 935836 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.877655914070413 33.0 33.0 33.0 33.0 33.0 2 31.999761710385155 33.0 33.0 33.0 33.0 33.0 3 31.715442663030704 33.0 33.0 33.0 27.0 33.0 4 31.997516658901773 33.0 33.0 33.0 33.0 33.0 5 32.09582020781419 33.0 33.0 33.0 33.0 33.0 6 35.27307135010835 37.0 37.0 37.0 33.0 37.0 7 35.41406400266713 37.0 37.0 37.0 33.0 37.0 8 35.546660953414914 37.0 37.0 37.0 33.0 37.0 9 35.66456622741592 37.0 37.0 37.0 33.0 37.0 10 35.66483123111314 37.0 37.0 37.0 33.0 37.0 11 35.685847734004675 37.0 37.0 37.0 33.0 37.0 12 35.68394462277578 37.0 37.0 37.0 33.0 37.0 13 35.69140319457683 37.0 37.0 37.0 33.0 37.0 14 35.66148342230904 37.0 37.0 37.0 33.0 37.0 15 35.67616761911275 37.0 37.0 37.0 33.0 37.0 16 35.67023602426066 37.0 37.0 37.0 33.0 37.0 17 35.65209823088661 37.0 37.0 37.0 33.0 37.0 18 35.64070093477917 37.0 37.0 37.0 33.0 37.0 19 35.628343000269275 37.0 37.0 37.0 33.0 37.0 20 35.63795258998371 37.0 37.0 37.0 33.0 37.0 21 35.64421116520416 37.0 37.0 37.0 33.0 37.0 22 35.53426989344287 37.0 37.0 37.0 33.0 37.0 23 35.58698105223565 37.0 37.0 37.0 33.0 37.0 24 35.57998516834146 37.0 37.0 37.0 33.0 37.0 25 35.608204856406466 37.0 37.0 37.0 33.0 37.0 26 35.49145683645425 37.0 37.0 37.0 33.0 37.0 27 35.50989382755098 37.0 37.0 37.0 33.0 37.0 28 35.528698404421284 37.0 37.0 37.0 33.0 37.0 29 35.542432648455495 37.0 37.0 37.0 33.0 37.0 30 35.546636376459126 37.0 37.0 37.0 33.0 37.0 31 35.53457336541873 37.0 37.0 37.0 33.0 37.0 32 35.529276497164034 37.0 37.0 37.0 33.0 37.0 33 35.52381613872516 37.0 37.0 37.0 33.0 37.0 34 35.50043917951436 37.0 37.0 37.0 33.0 37.0 35 35.43345201509666 37.0 37.0 37.0 33.0 37.0 36 35.466368038844415 37.0 37.0 37.0 33.0 37.0 37 35.457259605315464 37.0 37.0 37.0 33.0 37.0 38 35.43856402190127 37.0 37.0 37.0 33.0 37.0 39 35.34773934749251 37.0 37.0 37.0 33.0 37.0 40 35.13918678058976 37.0 37.0 37.0 33.0 37.0 41 35.30558559405708 37.0 37.0 37.0 33.0 37.0 42 35.33954346701773 37.0 37.0 37.0 33.0 37.0 43 35.021005817258576 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 4.0 15 41.0 16 48.0 17 48.0 18 29.0 19 29.0 20 58.0 21 143.0 22 401.0 23 866.0 24 1868.0 25 3364.0 26 5588.0 27 8631.0 28 12190.0 29 16671.0 30 22161.0 31 28625.0 32 37327.0 33 48623.0 34 71180.0 35 144838.0 36 533103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.426061831346516 20.65255023316051 13.69598946824016 24.22539846725281 2 16.109125957966995 21.47619882116097 39.19094798661304 23.223727234258995 3 17.491846862057027 27.82079338687548 30.0311165631585 24.656243187908995 4 12.116011779841768 17.979752862681067 40.41114041349125 29.493094943985916 5 13.34603498903654 37.61064972922606 35.54661286806663 13.496702413670771 6 28.80932129133737 40.59963497877833 17.3792202907347 13.211823439149594 7 26.26175953906454 32.45739638141726 23.6800037613428 17.600840318175408 8 24.353732919015727 35.74654106061318 20.471856179928963 19.427869840442128 9 26.072837548459344 15.233224624827427 20.475596151462437 38.21834167525079 10 15.41765864959245 27.732957484003606 33.69051842416834 23.158865442235605 11 33.46911210938669 24.05015408682718 23.97257639158998 18.508157412196155 12 23.245205356494086 26.272124603028736 29.68714603840844 20.79552400206874 13 27.400741155501606 22.59316803371531 26.25331788903184 23.752772921751248 14 21.945404964117646 21.088203488645448 28.233686244170986 28.73270530306592 15 24.183510786077903 28.359242431366177 25.30325826319996 22.153988519355956 16 22.695322684743907 28.369928064318962 25.353480738078037 23.58126851285909 17 22.15676678392368 27.47789142542069 26.376950662295528 23.9883911283601 18 22.674378844156454 27.135630601943078 28.284870426014812 21.905120127885656 19 24.952983215007755 25.90165370855577 27.79525472411833 21.35010835231814 20 23.989245978996323 26.141332455686676 28.029697511102373 21.839724054214628 21 23.091332241974023 27.06211344722793 27.861398792096054 21.985155518701998 22 22.51751375240961 26.99265683303485 27.712227356075207 22.77760205848033 23 22.44891198885275 26.93912181194141 28.438957253193937 22.173008946011908 24 22.972935428857195 27.503430088177844 26.640992652558783 22.882641830406182 25 22.851119213195474 26.962416491778473 28.08782735436551 22.098636940660544 26 23.035660094290026 27.275398680965466 28.004799986322386 21.684141238422118 27 23.084386580554714 27.009540133100245 27.02556858252942 22.880504703815628 28 22.112528263499158 26.772960219525643 28.48597403818618 22.628537478789017 29 24.1124513269419 26.644198342444614 27.218764826315724 22.02458550429776 30 23.33528524228604 26.29189302399138 28.125440782359302 22.247380951363276 31 22.890869767779826 26.581794246000367 28.042306557986656 22.48502942823315 32 21.637979304066096 26.50410969443364 28.395039301758 23.462871699742262 33 21.77571711282746 26.755008356164968 28.739330395496648 22.729944135510923 34 22.852080920161224 26.530289495167956 28.417372274629315 22.2002573100415 35 22.760184476767297 27.334383374864828 27.626956005112007 22.278476143255872 36 23.65393081693801 27.037002209788895 27.158070431143916 22.150996542129175 37 22.67705025239465 26.465427703144567 27.520954526220404 23.336567518240376 38 23.064190734273954 26.84519509828645 27.425745536611117 22.664868630828476 39 22.18903739544108 26.886334785154663 27.96045460956834 22.964173209835913 40 22.653862428887113 27.503323231848313 28.051175633337465 21.791638705927106 41 22.369197167024993 26.2132467654589 28.128005334267968 23.28955073324813 42 21.951816343889313 27.590945422061132 27.767899503759207 22.689338730290352 43 23.139845015579652 25.934458601720817 27.67536192238811 23.25033446031142 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 56.0 1 73.0 2 90.0 3 338.0 4 586.0 5 586.0 6 699.0 7 812.0 8 741.5 9 671.0 10 982.5 11 1294.0 12 1294.0 13 1981.5 14 2669.0 15 4706.5 16 6744.0 17 7648.0 18 8552.0 19 8552.0 20 7777.0 21 7002.0 22 7347.5 23 7693.0 24 9825.0 25 11957.0 26 11957.0 27 15250.5 28 18544.0 29 21912.5 30 25281.0 31 30209.5 32 35138.0 33 35138.0 34 43452.0 35 51766.0 36 55940.0 37 60114.0 38 64461.0 39 68808.0 40 68808.0 41 71967.5 42 75127.0 43 76919.5 44 78712.0 45 76322.0 46 73932.0 47 73932.0 48 70521.5 49 67111.0 50 67376.0 51 67641.0 52 63867.0 53 60093.0 54 60093.0 55 59025.5 56 57958.0 57 49277.0 58 40596.0 59 36748.5 60 32901.0 61 32901.0 62 29261.5 63 25622.0 64 20560.5 65 15499.0 66 12871.5 67 10244.0 68 10244.0 69 8546.0 70 6848.0 71 5955.5 72 5063.0 73 4954.5 74 4846.0 75 4846.0 76 4077.0 77 3308.0 78 2404.5 79 1501.0 80 966.5 81 432.0 82 432.0 83 348.0 84 264.0 85 228.0 86 192.0 87 154.0 88 116.0 89 116.0 90 79.5 91 43.0 92 25.5 93 8.0 94 5.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 935836.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.385402391269004 #Duplication Level Percentage of deduplicated Percentage of total 1 84.92587800869767 41.94098658891358 2 8.559269327407106 8.454059198184929 3 2.3385876686743936 3.4647627913423378 4 0.9834204600161431 1.9426646055081642 5 0.5771863495125749 1.4252290062713069 6 0.3839243745187283 1.1376155834054198 7 0.26389856781835414 0.9122915873532309 8 0.19581760703271026 0.7736425054884626 9 0.17208153396879527 0.7648484219240202 >10 1.270556882074161 12.646650259952935 >50 0.1738092524921497 6.070281324664844 >100 0.14040848787875185 13.498547610792693 >500 0.011645774422409215 3.9913024013685523 >1k 0.0032959738931346836 2.4125128459592085 >5k 2.1973159287564552E-4 0.5646052688703563 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5203 0.5559734825332644 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3701 0.39547527558247386 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2079 0.22215430908834455 No Hit GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC 1818 0.19426480708158267 No Hit TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG 1725 0.1843271684354951 No Hit GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC 1489 0.1591090746669288 No Hit GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA 1416 0.15130856261139772 No Hit AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC 1279 0.13666924546608594 No Hit CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTG 1217 0.1300441530353609 No Hit CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG 1165 0.12448762389991408 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 1129 0.12064079603691245 No Hit GATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCAC 1084 0.1158322612081604 No Hit TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG 1050 0.1121991460042144 No Hit CCATAGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCA 1050 0.1121991460042144 No Hit CCTTTAATAGCGGCTGCACCATCGGGATGTCCTGATCCAACAT 1023 0.1093140251069632 No Hit CTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAG 1007 0.10760432383451803 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 978 0.10450549027821113 No Hit GTACCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAA 971 0.10375749597151637 No Hit GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG 952 0.10172722571048774 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 941 0.10055180608568168 No Hit ACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTT 940 0.10044494975615385 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 4.27425318111293E-4 0.0 0.0 2 0.0 0.0 4.27425318111293E-4 0.0 0.0 3 0.0 0.0 5.342816476391162E-4 0.0 0.0 4 0.0 0.0 8.54850636222586E-4 0.0 0.0 5 0.0 0.0 0.0010685632952782324 0.0 0.0 6 0.0 0.0 0.002243982920084288 0.0 0.0 7 0.0 0.0 0.0037399715334738137 1.0685632952782325E-4 0.0 8 0.0 0.0 0.004381109510640753 1.0685632952782325E-4 0.0 9 0.0 0.0 0.005770241794502456 7.479943066947628E-4 0.0 10 2.137126590556465E-4 0.0 0.0066250924307250415 7.479943066947628E-4 0.0 11 2.137126590556465E-4 0.0 0.010258207634671033 7.479943066947628E-4 0.0 12 2.137126590556465E-4 0.0 0.011006201941365795 7.479943066947628E-4 0.0 13 2.137126590556465E-4 0.0 0.012288477895699673 7.479943066947628E-4 0.0 14 2.137126590556465E-4 0.0 0.01282275954333879 8.54850636222586E-4 0.0 15 2.137126590556465E-4 0.0 0.014746173474839608 9.617069657504092E-4 0.0 16 2.137126590556465E-4 0.0 0.01645587474728478 9.617069657504092E-4 0.0 17 3.205689885834698E-4 0.0 0.01677644373586825 0.0010685632952782324 0.0 18 4.27425318111293E-4 0.0 0.017310725383507367 0.0011754196248060557 0.0 19 5.342816476391162E-4 0.0 0.017524438042563012 0.0011754196248060557 0.0 20 5.342816476391162E-4 0.0 0.017845007031146484 0.0013891322838617023 0.0 21 5.342816476391162E-4 0.0 0.018379288678785598 0.001709701272445172 0.0 22 5.342816476391162E-4 0.0 0.018486145008313422 0.0023508392496121113 0.0 23 6.411379771669396E-4 0.0 0.018486145008313422 0.002457695579139935 0.0 24 6.411379771669396E-4 0.0 0.018486145008313422 0.0032056898858346975 0.0 25 6.411379771669396E-4 0.0 0.01869985766736907 0.003419402544890344 0.0 26 6.411379771669396E-4 0.0 0.01869985766736907 0.0036331152039459904 0.0 27 6.411379771669396E-4 0.0 0.01869985766736907 0.005129103817335516 0.0 28 6.411379771669396E-4 0.0 0.01869985766736907 0.013677610179561376 0.0 29 6.411379771669396E-4 0.0 0.01869985766736907 0.03237746784693044 0.0 30 6.411379771669396E-4 0.0 0.01869985766736907 0.06058753884227578 0.0 31 6.411379771669396E-4 0.0 0.01869985766736907 0.12138879034360721 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCAC 40 0.0019309203 23.125 23 GTATCAA 2460 0.0 22.93699 1 GGTATCA 900 0.0 22.816668 1 TCGCGCG 115 1.3460522E-10 20.913044 9 CGTGCGA 45 0.003825285 20.555555 32 GCCGAAC 45 0.003825285 20.555555 11 CGCACGG 45 0.003825285 20.555555 25 AATACGC 45 0.003825285 20.555555 5 AGTACGC 45 0.003825285 20.555555 21 TATAGGA 130 3.274181E-11 19.923077 2 ATCGCGC 160 0.0 19.65625 8 TAGGACC 275 0.0 19.509092 4 CCGTCCG 95 1.6752892E-7 19.473684 28 GGACCGT 95 1.6752892E-7 19.473684 6 GCCGGCA 105 2.2580934E-8 19.38095 15 AACGGCC 420 0.0 18.940475 37 GTCAACC 420 0.0 18.940475 15 CGCGCGC 130 6.9667294E-10 18.5 10 TGTCCGG 150 1.2732926E-11 18.5 14 CCGACAT 50 0.00703393 18.499998 28 >>END_MODULE