##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633444.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1259227 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.873038776963963 33.0 33.0 33.0 33.0 33.0 2 31.996211961782905 33.0 33.0 33.0 33.0 33.0 3 31.722046144182105 33.0 33.0 33.0 27.0 33.0 4 31.99259307495789 33.0 33.0 33.0 33.0 33.0 5 32.09753126322736 33.0 33.0 33.0 33.0 33.0 6 35.27075261251546 37.0 37.0 37.0 33.0 37.0 7 35.409053331925065 37.0 37.0 37.0 33.0 37.0 8 35.541373398124406 37.0 37.0 37.0 33.0 37.0 9 35.64412135381468 37.0 37.0 37.0 33.0 37.0 10 35.66105237578292 37.0 37.0 37.0 33.0 37.0 11 35.6774235304675 37.0 37.0 37.0 33.0 37.0 12 35.675143560295325 37.0 37.0 37.0 33.0 37.0 13 35.666380247564575 37.0 37.0 37.0 33.0 37.0 14 35.63960350278385 37.0 37.0 37.0 33.0 37.0 15 35.67518167891889 37.0 37.0 37.0 33.0 37.0 16 35.65267183756384 37.0 37.0 37.0 33.0 37.0 17 35.64533082597498 37.0 37.0 37.0 33.0 37.0 18 35.6275476939424 37.0 37.0 37.0 33.0 37.0 19 35.61962060851618 37.0 37.0 37.0 33.0 37.0 20 35.62308622670893 37.0 37.0 37.0 33.0 37.0 21 35.62067045894029 37.0 37.0 37.0 33.0 37.0 22 35.531043251137405 37.0 37.0 37.0 33.0 37.0 23 35.58248909847073 37.0 37.0 37.0 33.0 37.0 24 35.567044702821654 37.0 37.0 37.0 33.0 37.0 25 35.59115234981461 37.0 37.0 37.0 33.0 37.0 26 35.47935995654477 37.0 37.0 37.0 33.0 37.0 27 35.49769104379115 37.0 37.0 37.0 33.0 37.0 28 35.52066148518099 37.0 37.0 37.0 33.0 37.0 29 35.53142126082112 37.0 37.0 37.0 33.0 37.0 30 35.53011331554994 37.0 37.0 37.0 33.0 37.0 31 35.52709956187407 37.0 37.0 37.0 33.0 37.0 32 35.526276834915386 37.0 37.0 37.0 33.0 37.0 33 35.52190669355088 37.0 37.0 37.0 33.0 37.0 34 35.50310388833785 37.0 37.0 37.0 33.0 37.0 35 35.45338211458299 37.0 37.0 37.0 33.0 37.0 36 35.47922257067233 37.0 37.0 37.0 33.0 37.0 37 35.48644843225249 37.0 37.0 37.0 33.0 37.0 38 35.478741323049775 37.0 37.0 37.0 33.0 37.0 39 35.38021182836772 37.0 37.0 37.0 33.0 37.0 40 35.17833639208816 37.0 37.0 37.0 33.0 37.0 41 35.354011627768465 37.0 37.0 37.0 33.0 37.0 42 35.40638026344734 37.0 37.0 37.0 33.0 37.0 43 35.07576791158385 37.0 37.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 4.0 15 32.0 16 58.0 17 56.0 18 29.0 19 40.0 20 68.0 21 167.0 22 505.0 23 1215.0 24 2619.0 25 4954.0 26 7764.0 27 11585.0 28 16979.0 29 22785.0 30 29739.0 31 38238.0 32 48865.0 33 64892.0 34 94062.0 35 192769.0 36 721802.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.356880054191976 20.227885837898967 14.003591091995327 24.411643015913732 2 15.731635360423498 21.896369757001715 39.4575402211039 22.914454661470888 3 17.94148314799476 26.970832105728356 30.781423841769595 24.30626090450729 4 12.763544619040093 17.985875461691975 39.0740509852473 30.176528934020634 5 13.63900234032466 37.429470619673815 35.32389315032158 13.607633889679938 6 29.205854067614496 39.41656270076801 17.76558158298702 13.61200164863047 7 26.087591832131935 32.60436760012293 23.513552361885505 17.794488205859626 8 24.180707688129306 36.083406724919335 20.814118502859294 18.921767084092068 9 25.931702544497536 15.994097966450846 20.012912683733752 38.06128680531787 10 14.89135795214048 28.40409235189525 33.79128624147989 22.91326345448438 11 33.17320864308024 24.0946231299043 24.400763325436955 18.33140490157851 12 22.645877192912796 25.806784638512358 30.35060398164906 21.196734186925788 13 27.912520935462787 22.404062174651592 26.64055011526913 23.042866774616492 14 22.158435294033563 21.361676647657653 27.622660568745744 28.85722748956304 15 23.915306771535235 28.529804395871434 24.744704489341476 22.81018434325185 16 22.9021455226103 28.759707344267554 24.885743396544072 23.452403736578077 17 22.56821049739245 27.710651058149168 26.183761942842715 23.53737650161567 18 23.029048773572995 27.266886748775242 27.467962488097857 22.23610198955391 19 25.14248820903618 26.43058003044725 27.499013283546176 20.927918476970394 20 24.789335044435994 25.92789068214071 27.594309842466846 21.688464430956454 21 22.975603286778316 27.323429373734836 26.80525433460369 22.895713004883156 22 22.532156632600795 27.211614744601253 26.994973900654927 23.26125472214303 23 22.617923535629398 27.179531569764627 27.511401836205863 22.691143058400115 24 23.42222649291986 27.21042353761474 26.622126113877798 22.745223855587597 25 23.435568011168755 26.77666536692749 27.316520373213088 22.471246248690665 26 23.324229864829775 26.833049164288887 26.948437414382 22.894283556499346 27 23.080588329189254 26.80549257600099 26.8065249553893 23.307394139420452 28 22.401838588276775 27.149433739905515 27.46923310888347 22.979494562934242 29 23.416746940781923 27.081534941674533 26.781986091467225 22.719732026076315 30 22.81558448159069 27.426587898766464 27.092891114945918 22.66493650469693 31 23.455580288542098 26.80104540325136 27.012683177854353 22.73069113035219 32 22.337433997206222 26.89054475483769 27.33978861634955 23.432232631606535 33 22.57972549826203 26.71718443140117 27.664114571876237 23.038975498460562 34 22.697019679533557 26.821692991017503 27.111076874939943 23.370210454508996 35 23.049140464745435 27.254895265111056 26.996721004235134 22.69924326590837 36 23.190814682340832 27.08320263145565 26.899756755533353 22.826225930670166 37 23.757829207918828 26.280408536348094 26.798821816876544 23.162940438856534 38 23.46193339247014 26.864258787335405 26.971705657518463 22.702102162675992 39 23.052872913303162 26.69883984380894 27.17841977657722 23.069867466310683 40 23.08527374333619 26.684148290975333 27.254498196115552 22.97607976957292 41 22.77008037470607 26.616011251347054 27.593833359672242 23.020075014274628 42 22.994106701968747 26.68073349761401 27.05207242220823 23.273087378209013 43 22.815505067791587 26.492046310951086 27.233453539353906 23.45899508190342 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 49.0 2 69.0 3 214.0 4 359.0 5 359.0 6 454.5 7 550.0 8 512.5 9 475.0 10 681.5 11 888.0 12 888.0 13 1367.0 14 1846.0 15 3706.0 16 5566.0 17 6531.0 18 7496.0 19 7496.0 20 7527.0 21 7558.0 22 9324.0 23 11090.0 24 14453.5 25 17817.0 26 17817.0 27 22632.5 28 27448.0 29 35800.0 30 44152.0 31 48254.0 32 52356.0 33 52356.0 34 59071.5 35 65787.0 36 70125.5 37 74464.0 38 81853.5 39 89243.0 40 89243.0 41 93526.0 42 97809.0 43 94176.0 44 90543.0 45 92634.0 46 94725.0 47 94725.0 48 93627.5 49 92530.0 50 94375.0 51 96220.0 52 96799.0 53 97378.0 54 97378.0 55 85860.0 56 74342.0 57 66732.5 58 59123.0 59 52220.0 60 45317.0 61 45317.0 62 40229.5 63 35142.0 64 29192.0 65 23242.0 66 19715.5 67 16189.0 68 16189.0 69 13483.5 70 10778.0 71 9329.5 72 7881.0 73 6337.0 74 4793.0 75 4793.0 76 3643.0 77 2493.0 78 1964.5 79 1436.0 80 1119.0 81 802.0 82 802.0 83 656.5 84 511.0 85 455.5 86 400.0 87 315.0 88 230.0 89 230.0 90 168.5 91 107.0 92 70.5 93 34.0 94 21.5 95 9.0 96 9.0 97 4.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1259227.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.821450199653306 #Duplication Level Percentage of deduplicated Percentage of total 1 84.62746003979362 45.547726260549034 2 9.041794019499202 9.732849330719986 3 2.4203650635383505 3.9080267319663013 4 1.0253601994659274 2.2074549164904798 5 0.6006304876103982 1.6163401938658264 6 0.3860786886184598 1.2467588947575534 7 0.26435057542597157 0.9959411931377035 8 0.1991681570103128 0.8575615235109824 9 0.1455295212766262 0.704934889377239 >10 1.011654129242766 10.79139311364852 >50 0.14720476135030883 5.5639381249311 >100 0.12203936117808556 12.753824016750542 >500 0.005974997135663929 2.1139259213636925 >1k 0.0023899988542655714 1.9593248889311081 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3939 0.3128109546571031 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2637 0.2094141882281749 No Hit GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC 1636 0.12992097532851504 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 1561 0.12396494039597308 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1543 0.12253549201216303 No Hit GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC 1501 0.11920011244993953 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 1355 0.10760569778125786 No Hit GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG 1305 0.1036350078262299 No Hit ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT 1290 0.10244380083972152 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 7.941379910055932E-5 7.941379910055932E-5 0.0 2 0.0 0.0 2.3824139730167792E-4 7.941379910055932E-5 0.0 3 0.0 0.0 3.9706899550279656E-4 7.941379910055932E-5 0.0 4 0.0 0.0 5.558965937039152E-4 7.941379910055932E-5 0.0 5 0.0 0.0 7.941379910055931E-4 7.941379910055932E-5 0.0 6 0.0 0.0 0.0015088621829106269 7.941379910055932E-5 0.0 7 7.941379910055932E-5 0.0 0.0031765519640223725 7.941379910055932E-5 0.0 8 7.941379910055932E-5 0.0 0.00349420716042461 7.941379910055932E-5 0.0 9 7.941379910055932E-5 0.0 0.004526586548731881 3.9706899550279656E-4 0.0 10 3.1765519640223727E-4 0.0 0.005161896941536355 3.9706899550279656E-4 0.0 11 3.1765519640223727E-4 0.0 0.007703138512754253 5.558965937039152E-4 0.0 12 3.1765519640223727E-4 0.0 0.008417862704659287 5.558965937039152E-4 0.0 13 3.1765519640223727E-4 0.0 0.008735517901061524 5.558965937039152E-4 0.0 14 3.1765519640223727E-4 0.0 0.009450242092966557 5.558965937039152E-4 0.0 15 3.1765519640223727E-4 0.0 0.010085552485771032 5.558965937039152E-4 0.0 16 3.1765519640223727E-4 0.0 0.010641449079474948 6.353103928044745E-4 0.0 17 3.9706899550279656E-4 0.0 0.010959104275877185 7.147241919050338E-4 0.0 18 3.9706899550279656E-4 0.0 0.011038518074977745 7.147241919050338E-4 0.0 19 3.9706899550279656E-4 0.0 0.011117931874078304 7.147241919050338E-4 0.0 20 3.9706899550279656E-4 0.0 0.011117931874078304 7.941379910055931E-4 0.0 21 3.9706899550279656E-4 0.0 0.0115150008695811 9.529655892067117E-4 0.0 22 3.9706899550279656E-4 0.0 0.01159441466868166 0.0013500345847095082 0.0 23 3.9706899550279656E-4 0.0 0.011753242266882779 0.0015882759820111862 0.0 24 3.9706899550279656E-4 0.0 0.011753242266882779 0.0018265173793128643 0.0 25 3.9706899550279656E-4 0.0 0.011753242266882779 0.002144172575715101 0.0 26 3.9706899550279656E-4 0.0 0.011753242266882779 0.0026206553703184573 0.0 27 4.7648279460335585E-4 0.0 0.011753242266882779 0.0036530347586257285 0.0 28 5.558965937039152E-4 0.0 0.011753242266882779 0.009847311088469354 0.0 29 5.558965937039152E-4 0.0 0.011753242266882779 0.022712346542759963 0.0 30 5.558965937039152E-4 0.0 0.011753242266882779 0.040580451340385806 0.0 31 5.558965937039152E-4 0.0 0.011753242266882779 0.0993466626747997 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1010 0.0 28.940596 1 GTATCAA 2755 0.0 21.891108 1 GTCGCCA 250 0.0 19.980001 12 TTCGCCG 85 1.2455021E-6 19.588236 24 TCGCCAT 280 0.0 18.5 13 TACCGTA 50 0.0070352466 18.5 7 TAACCGT 130 1.3933459E-8 17.076923 7 CGGCCTT 330 0.0 16.257576 24 GTACTAA 115 1.2423498E-6 16.086956 1 ATCTCGC 335 0.0 16.014925 11 CTAACCG 130 2.5893314E-7 15.653846 6 TCTCGCC 355 0.0 15.633803 12 AGAGGTC 355 0.0 15.633803 8 CGAACTA 180 2.0190782E-10 15.416667 29 TTACGTT 75 0.0041046944 14.800001 4 AACCTCG 75 0.0041046944 14.800001 5 TTAGCCG 275 0.0 14.8 29 TATTGTC 405 0.0 14.617284 5 TATCAAC 4115 0.0 14.611179 2 GCGAACT 190 4.5474735E-10 14.605264 28 >>END_MODULE