ERR1633415.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1633415.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	428612
Sequences flagged as poor quality	0
Sequence length	43
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2832	0.6607374501880489	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	2136	0.49835282259946057	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	1206	0.28137336332160556	No Hit
ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA	540	0.12598807312907712	No Hit
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC	500	0.11665562326766399	No Hit
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC	499	0.11642231202112867	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	482	0.11245602083002808	No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT	446	0.10405681595475628	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCCAT	80	3.274181E-11	27.75	13
CATAATA	90	5.456968E-12	26.722223	2
TGCGGTA	35	8.8602846E-4	26.42857	36
GTCGCCA	95	1.0913936E-11	25.31579	12
GGTATCA	540	0.0	24.324074	1
ATAGCGG	70	1.9170693E-7	23.785713	7
GCCGGCA	70	1.9170693E-7	23.785713	15
GTATATC	75	3.7294558E-7	22.2	1
GTATCAA	1340	0.0	21.95149	1
CGCTCTC	60	3.719271E-5	21.583334	29
ACAACGC	45	0.0038219523	20.555557	3
TTGCGGT	45	0.0038219523	20.555557	35
CCGCTCT	75	9.243555E-6	19.733334	28
CCGGCAG	85	1.241584E-6	19.588236	16
TGCTCGC	85	1.241584E-6	19.588236	10
AATAGCG	85	1.241584E-6	19.588236	6
ATCTCGC	90	2.1458145E-6	18.5	11
ATAATAC	90	2.1458145E-6	18.5	3
ACTCTGT	70	1.2169349E-4	18.5	6
GCTTCGC	70	1.2169349E-4	18.5	22