ERR1633412.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1633412.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	650444
Sequences flagged as poor quality	0
Sequence length	43
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3662	0.5630000430475183	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	2672	0.41079631759229085	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	1420	0.21831241428931625	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC	801	0.12314665059559317	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	798	0.12268542718512278	No Hit
GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA	737	0.11330721783889158	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTG	729	0.1120772887443039	No Hit
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG	694	0.10669634895548272	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA	659	0.10131540916666153	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	657	0.10100792689301463	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA	654	0.10054670348254424	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCATG	45	1.3223494E-4	24.666666	11
GTATCAA	1755	0.0	24.666666	1
CCTTGCG	45	1.3223494E-4	24.666666	33
GGTATCA	585	0.0	23.717949	1
CGTAGGC	40	0.0019302913	23.125	18
GTATACG	40	0.0019302913	23.125	1
ATGCCCG	115	5.456968E-12	22.52174	29
CCGGCAG	50	2.7003555E-4	22.199999	16
CTTGCGG	50	2.7003555E-4	22.199999	34
GCCGGCA	45	0.003824049	20.555555	15
AAACGCA	45	0.003824049	20.555555	5
TTCGCCG	45	0.003824049	20.555555	24
TGCGGTA	70	1.2181648E-4	18.5	36
AACGCAC	60	9.2309405E-4	18.5	32
TGCACCG	60	9.2309405E-4	18.5	5
ATTCCGG	50	0.00703168	18.499998	1
TATCGGA	50	0.00703168	18.499998	26
CGAACTA	245	0.0	18.122448	29
AACGGCC	195	0.0	18.025642	37
TTAACGG	190	0.0	17.526316	35