##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633407.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1076282 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.881303413046023 33.0 33.0 33.0 33.0 33.0 2 31.986621535991496 33.0 33.0 33.0 33.0 33.0 3 31.70513118309142 33.0 33.0 33.0 27.0 33.0 4 31.98460161927822 33.0 33.0 33.0 33.0 33.0 5 32.07754844919826 33.0 33.0 33.0 33.0 33.0 6 35.24345849879492 37.0 37.0 37.0 33.0 37.0 7 35.40178503403383 37.0 37.0 37.0 33.0 37.0 8 35.53959092505496 37.0 37.0 37.0 33.0 37.0 9 35.648880126212276 37.0 37.0 37.0 33.0 37.0 10 35.65166099590999 37.0 37.0 37.0 33.0 37.0 11 35.68238435651623 37.0 37.0 37.0 33.0 37.0 12 35.66468267610162 37.0 37.0 37.0 33.0 37.0 13 35.669345022958666 37.0 37.0 37.0 33.0 37.0 14 35.6564218299665 37.0 37.0 37.0 33.0 37.0 15 35.673004844455264 37.0 37.0 37.0 33.0 37.0 16 35.656767464289096 37.0 37.0 37.0 33.0 37.0 17 35.65071793451902 37.0 37.0 37.0 33.0 37.0 18 35.63389892240138 37.0 37.0 37.0 33.0 37.0 19 35.62365718278295 37.0 37.0 37.0 33.0 37.0 20 35.62465041689817 37.0 37.0 37.0 33.0 37.0 21 35.623426759901214 37.0 37.0 37.0 33.0 37.0 22 35.5308023361907 37.0 37.0 37.0 33.0 37.0 23 35.57678656708929 37.0 37.0 37.0 33.0 37.0 24 35.577149854777836 37.0 37.0 37.0 33.0 37.0 25 35.600928938698225 37.0 37.0 37.0 33.0 37.0 26 35.4830982957998 37.0 37.0 37.0 33.0 37.0 27 35.489289981621916 37.0 37.0 37.0 33.0 37.0 28 35.51610172798579 37.0 37.0 37.0 33.0 37.0 29 35.51907399733527 37.0 37.0 37.0 33.0 37.0 30 35.52556671950288 37.0 37.0 37.0 33.0 37.0 31 35.52194685036078 37.0 37.0 37.0 33.0 37.0 32 35.50068197739998 37.0 37.0 37.0 33.0 37.0 33 35.49476717068575 37.0 37.0 37.0 33.0 37.0 34 35.480363882328234 37.0 37.0 37.0 33.0 37.0 35 35.41116733346836 37.0 37.0 37.0 33.0 37.0 36 35.44816042635666 37.0 37.0 37.0 33.0 37.0 37 35.441388966832115 37.0 37.0 37.0 33.0 37.0 38 35.437535887434706 37.0 37.0 37.0 33.0 37.0 39 35.333140385140695 37.0 37.0 37.0 33.0 37.0 40 35.11396455575769 37.0 37.0 37.0 33.0 37.0 41 35.28448120474002 37.0 37.0 37.0 33.0 37.0 42 35.32755820500575 37.0 37.0 37.0 33.0 37.0 43 35.00772102478719 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 5.0 15 31.0 16 60.0 17 35.0 18 30.0 19 51.0 20 63.0 21 143.0 22 453.0 23 1051.0 24 2169.0 25 3997.0 26 6543.0 27 10172.0 28 14331.0 29 19588.0 30 25748.0 31 33300.0 32 42779.0 33 56389.0 34 81934.0 35 166675.0 36 610735.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.508545158239194 20.221187383975575 13.870063793689758 24.400203664095468 2 15.953997186610943 21.674152313241322 39.37090836788128 23.00094213226645 3 17.825253976188396 27.386595706329754 30.16848744102382 24.61966287645803 4 12.479257295021192 17.86966612839386 39.77544918525071 29.87562739133424 5 13.67281065742993 37.22955507943085 35.14673663593742 13.950897627201792 6 28.941392683330204 40.10956236376712 17.53285848876038 13.416186464142296 7 26.18235741190506 32.45190386906034 23.615929654124105 17.749809064910497 8 24.51894577815108 35.679961199759916 20.75441194779807 19.046681074290937 9 26.17380946629229 15.421887572216203 20.363900910727857 38.04040205076365 10 15.297199061212583 28.064763695760032 33.65604925103272 22.98198799199466 11 33.781481061654844 24.05958661391717 24.11635612228022 18.042576202147764 12 23.120985020654437 25.81303041396214 30.123424901652168 20.942559663731252 13 28.165387881614667 22.27120773180263 26.22741995127671 23.33598443530599 14 22.221220832458407 21.064182063808556 28.111405746821 28.603191356912035 15 23.853692619592263 28.58470177890181 24.81050505350828 22.751100547997645 16 22.67416903748274 28.10109246461429 25.45578203481987 23.768956463083097 17 22.229118390904986 27.309664195814854 26.6067814940694 23.854435919210765 18 23.274662216779618 26.63865046521265 27.833690426858386 22.252996891149344 19 24.95479809194988 25.886338338836843 27.659758316129047 21.499105253084227 20 24.11905058339729 26.218314530950064 27.72860644329274 21.934028442359903 21 23.43335668532968 26.67804534499323 27.642476599998883 22.246121369678207 22 22.89567232379618 26.496866062983493 27.794295547077812 22.813166066142518 23 22.847264936141272 26.514519428922906 28.07303290401586 22.565182730919965 24 22.99926970812482 26.78275767874962 27.23171064832451 22.986261964801045 25 23.096734870600827 26.54248607706902 28.194748216545477 22.16603083578467 26 23.22114464424751 26.5943312254595 27.911922711705667 22.27260141858732 27 23.128232191934828 26.653609370034992 27.36160225665764 22.85655618137254 28 22.674261949935055 26.472430088025256 28.118374180744453 22.734933781295236 29 23.601714048920265 26.35656825999134 27.471610600195863 22.570107090892535 30 23.39972237759249 26.49147714074936 27.716156174682844 22.39264430697531 31 23.172458519235665 26.278893449857936 27.721545096916977 22.82710293398942 32 22.217690159270525 26.37998219797414 28.126643389000282 23.27568425375506 33 22.47431435255816 26.530407458268375 28.18369163472027 22.8115865544532 34 22.87012139941019 26.35907689620378 27.950667204320055 22.820134500065965 35 23.059569889675753 26.685013778916677 27.67806206923464 22.577354262172925 36 23.54828938884047 26.5511269351341 27.18367491047885 22.716908765546577 37 23.284975498986324 26.108120362507226 27.54984288504314 23.057061253463313 38 23.331710462499604 26.496122763364994 27.25354507461799 22.918621699517413 39 22.54000345634323 26.533287744290064 27.809626101709405 23.117082697657303 40 22.9683298615047 26.568873213525823 28.062812534261468 22.39998439070801 41 22.732703882439733 26.017344896597734 27.92232890636469 23.32762231459785 42 22.199572231069553 27.070321718657375 27.723496258415548 23.006609791857525 43 23.146443032588113 25.88327222791053 27.751834556370913 23.218450183130443 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 73.5 2 105.0 3 366.5 4 628.0 5 628.0 6 724.0 7 820.0 8 787.5 9 755.0 10 1000.5 11 1246.0 12 1246.0 13 2085.5 14 2925.0 15 5377.0 16 7829.0 17 8942.0 18 10055.0 19 10055.0 20 9156.0 21 8257.0 22 8926.0 23 9595.0 24 12289.0 25 14983.0 26 14983.0 27 18917.5 28 22852.0 29 27536.5 30 32221.0 31 36919.5 32 41618.0 33 41618.0 34 48945.5 35 56273.0 36 60995.0 37 65717.0 38 69646.5 39 73576.0 40 73576.0 41 77295.5 42 81015.0 43 82057.0 44 83099.0 45 82651.0 46 82203.0 47 82203.0 48 80416.5 49 78630.0 50 77481.5 51 76333.0 52 73370.0 53 70407.0 54 70407.0 55 67987.0 56 65567.0 57 58116.5 58 50666.0 59 46248.0 60 41830.0 61 41830.0 62 37647.5 63 33465.0 64 27000.5 65 20536.0 66 17261.0 67 13986.0 68 13986.0 69 11718.0 70 9450.0 71 7898.0 72 6346.0 73 6112.0 74 5878.0 75 5878.0 76 4952.5 77 4027.0 78 3002.5 79 1978.0 80 1321.5 81 665.0 82 665.0 83 496.5 84 328.0 85 265.5 86 203.0 87 161.0 88 119.0 89 119.0 90 80.0 91 41.0 92 26.0 93 11.0 94 6.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1076282.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.77914229681529 #Duplication Level Percentage of deduplicated Percentage of total 1 85.14443146323632 47.49283358369294 2 8.973246748239442 10.010400144689658 3 2.206937341327078 3.6930321600611493 4 0.9117067355490888 2.0341687894063027 5 0.5359031113765741 1.4946107953389989 6 0.3137934546076948 1.0501877853823114 7 0.24484055966927445 0.9559897492477046 8 0.1838100238920987 0.8202212382606713 9 0.1388708848230072 0.6971488960884448 >10 1.0875814777281512 12.297283799452833 >50 0.15358197951285682 6.003438250997321 >100 0.1002339020399238 10.43373084253373 >500 0.004218598331987587 1.560198075728338 >1k 6.74975733118014E-4 0.8766701784105778 >5k 1.687439332795035E-4 0.5800857107090822 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6163 0.5726194436030706 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4411 0.40983682715124853 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2359 0.21918047500562118 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 1433 0.13314354416407595 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1111 0.10322573451939177 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 2.7873735693805153E-4 0.0 0.0 2 1.858249046253677E-4 0.0 2.7873735693805153E-4 0.0 0.0 3 1.858249046253677E-4 0.0 5.574747138761031E-4 0.0 0.0 4 1.858249046253677E-4 0.0 8.362120708141547E-4 0.0 0.0 5 1.858249046253677E-4 0.0 0.0011149494277522061 0.0 0.0 6 2.7873735693805153E-4 0.0 0.0021369864031917287 0.0 0.0 7 2.7873735693805153E-4 0.0 0.004738535067946877 0.0 0.0 8 3.716498092507354E-4 0.0 0.005760572043386399 0.0 0.0 9 3.716498092507354E-4 0.0 0.007432996185014708 6.50387166188787E-4 0.0 10 8.362120708141547E-4 0.0 0.008919595422017649 6.50387166188787E-4 0.0 11 8.362120708141547E-4 0.0 0.013658130489964527 8.362120708141547E-4 0.0 12 8.362120708141547E-4 0.0 0.0149589048223421 9.291245231268385E-4 0.0 13 8.362120708141547E-4 0.0 0.016817153868595777 0.0010220369754395224 0.0 14 8.362120708141547E-4 0.0 0.017932103296347982 0.0010220369754395224 0.0 15 8.362120708141547E-4 0.0 0.020162002151852397 0.0011149494277522061 0.0 16 8.362120708141547E-4 0.0 0.021369864031917287 0.0011149494277522061 0.0 17 8.362120708141547E-4 0.0 0.02202025119810607 0.00120786188006489 0.0 18 9.291245231268385E-4 0.0 0.022577725911982177 0.001300774332377574 0.0 19 9.291245231268385E-4 0.0 0.02313520062585828 0.0013936867846902577 0.0 20 9.291245231268385E-4 0.0 0.023692675339734383 0.0016724241416283094 0.0 21 0.0010220369754395224 0.0 0.02564383683830074 0.001858249046253677 0.0 22 0.0010220369754395224 0.0 0.025922574195238794 0.002322811307817096 0.0 23 0.0010220369754395224 0.0 0.026294224004489528 0.002508636212442464 0.0 24 0.0010220369754395224 0.0 0.02657296136142758 0.0027873735693805155 0.0 25 0.0010220369754395224 0.0 0.02657296136142758 0.0028802860216931995 0.0 26 0.0010220369754395224 0.0 0.02657296136142758 0.0033448482832566188 0.0 27 0.0010220369754395224 0.0 0.026665873813740266 0.004738535067946877 0.0 28 0.0011149494277522061 0.0 0.026665873813740266 0.01570220444084357 0.0 29 0.0011149494277522061 0.0 0.026665873813740266 0.03642168130657207 0.0 30 0.0011149494277522061 0.0 0.026665873813740266 0.06104348116943329 0.0 31 0.0011149494277522061 0.0 0.026665873813740266 0.12301608686199342 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGTCG 30 3.599328E-4 30.833332 9 GGTATCA 965 0.0 25.49741 1 CGTATGG 45 1.3231357E-4 24.666666 10 CCGTATG 45 1.3231357E-4 24.666666 9 GTATCAA 2760 0.0 24.197462 1 ACCGTAT 75 3.7403152E-7 22.2 8 CGCCTAT 45 0.003825652 20.555555 36 CGGTCGT 45 0.003825652 20.555555 10 TCTATCG 45 0.003825652 20.555555 31 TTAACGG 170 0.0 19.588234 35 CGAGTCG 105 2.259003E-8 19.38095 21 CATAATA 205 0.0 18.951218 2 GTACCGG 50 0.0070345984 18.5 6 GCCGCTC 175 0.0 17.97143 27 CCGTTAA 155 2.0008883E-11 17.903225 16 CGCCGTC 105 4.796566E-7 17.619047 26 GCCGTCC 105 4.796566E-7 17.619047 27 CCGCTCT 195 0.0 17.076923 28 CGCTCTC 210 0.0 16.738094 29 CCGTCCG 100 5.877091E-6 16.650002 28 >>END_MODULE