##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633342.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 852930 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.88014373981452 33.0 33.0 33.0 33.0 33.0 2 31.979226900214556 33.0 33.0 33.0 33.0 33.0 3 31.700670629477212 33.0 33.0 33.0 27.0 33.0 4 31.974810359584023 33.0 33.0 33.0 33.0 33.0 5 32.07198246045983 33.0 33.0 33.0 33.0 33.0 6 35.235276048444774 37.0 37.0 37.0 33.0 37.0 7 35.3869156906194 37.0 37.0 37.0 33.0 37.0 8 35.51867796888373 37.0 37.0 37.0 33.0 37.0 9 35.639474517252296 37.0 37.0 37.0 33.0 37.0 10 35.63076102376514 37.0 37.0 37.0 33.0 37.0 11 35.650303072936815 37.0 37.0 37.0 33.0 37.0 12 35.657501787954466 37.0 37.0 37.0 33.0 37.0 13 35.660819762465856 37.0 37.0 37.0 33.0 37.0 14 35.627290633463474 37.0 37.0 37.0 33.0 37.0 15 35.651160118649834 37.0 37.0 37.0 33.0 37.0 16 35.644540583635234 37.0 37.0 37.0 33.0 37.0 17 35.626917800991876 37.0 37.0 37.0 33.0 37.0 18 35.61218388378882 37.0 37.0 37.0 33.0 37.0 19 35.59450365211682 37.0 37.0 37.0 33.0 37.0 20 35.60102118579485 37.0 37.0 37.0 33.0 37.0 21 35.60213733835133 37.0 37.0 37.0 33.0 37.0 22 35.50830548814088 37.0 37.0 37.0 33.0 37.0 23 35.55271358728149 37.0 37.0 37.0 33.0 37.0 24 35.55763778973655 37.0 37.0 37.0 33.0 37.0 25 35.57102810312687 37.0 37.0 37.0 33.0 37.0 26 35.46432649807135 37.0 37.0 37.0 33.0 37.0 27 35.47005381449826 37.0 37.0 37.0 33.0 37.0 28 35.49804438816785 37.0 37.0 37.0 33.0 37.0 29 35.50389949937275 37.0 37.0 37.0 33.0 37.0 30 35.49882053626909 37.0 37.0 37.0 33.0 37.0 31 35.49263480004221 37.0 37.0 37.0 33.0 37.0 32 35.47303295698357 37.0 37.0 37.0 33.0 37.0 33 35.47012650510593 37.0 37.0 37.0 33.0 37.0 34 35.43297105272414 37.0 37.0 37.0 33.0 37.0 35 35.373294408685354 37.0 37.0 37.0 33.0 37.0 36 35.394956209771024 37.0 37.0 37.0 33.0 37.0 37 35.390489254686784 37.0 37.0 37.0 33.0 37.0 38 35.3702578171714 37.0 37.0 37.0 33.0 37.0 39 35.27076782385424 37.0 37.0 37.0 33.0 37.0 40 35.04250876390794 37.0 37.0 37.0 27.0 37.0 41 35.197777074320285 37.0 37.0 37.0 33.0 37.0 42 35.23480824921154 37.0 37.0 37.0 33.0 37.0 43 34.89082808671286 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 28.0 16 44.0 17 49.0 18 46.0 19 43.0 20 66.0 21 179.0 22 365.0 23 862.0 24 1832.0 25 3275.0 26 5474.0 27 8289.0 28 11720.0 29 15683.0 30 20787.0 31 27214.0 32 34558.0 33 45224.0 34 65623.0 35 131986.0 36 479582.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.8612312850996 20.339535483568405 14.33411886086783 23.465114370464164 2 15.560479758010622 22.399141781857832 39.7968180272707 22.243560432860846 3 17.732522012357403 28.077450670043262 30.802645000175865 23.38738231742347 4 12.08493076805834 18.137948014491222 40.40870880377053 29.368412413679902 5 13.425017293330049 37.290047248894986 35.22364086150095 14.06129459627402 6 28.125989237100345 40.836176474036556 17.54716096279882 13.490673326064273 7 25.5427760777555 33.174938154362025 23.614247359103327 17.66803840877915 8 24.3980162498681 35.49599615443237 20.847314551018254 19.258673044681277 9 26.365117887751634 15.38625678543374 20.49523407548099 37.75339125133364 10 14.81200098484049 28.278639513207416 33.7923393478949 23.11702015405719 11 32.89308618526726 24.498610671450177 24.338105119998126 18.270198023284443 12 22.930721161173835 26.22923334857491 30.680008910461588 20.16003657978967 13 28.16807944379961 22.92134172792609 26.584713868664483 22.325864959609813 14 22.248015663653522 21.583717303881915 28.831088131499655 27.337178900964908 15 23.66876531485585 28.656396187260384 25.735523430996682 21.939315066887083 16 21.92090792913838 29.154444092715696 25.72450259693058 23.20014538121534 17 21.960536034610108 27.409517779888148 26.951215222820164 23.67873096268158 18 23.175993340602393 26.546844406926713 28.56940194388754 21.707760308583353 19 24.77026250688802 26.09592815354132 28.760859625057154 20.3729497145135 20 24.519010938764023 25.844442099586136 28.55920181023062 21.077345151419223 21 22.700690560772866 27.07572719918399 28.347343861747156 21.87623837829599 22 22.23078095506079 27.06880986716378 28.556270737340693 22.144138440434737 23 22.0864549259611 26.757178197507415 29.093243290774158 22.06312358575733 24 22.44428030436261 27.005264206910297 28.41100676491623 22.139448723810865 25 22.5701991957136 26.76479898702121 28.947041375024913 21.717960442240276 26 22.545695426353863 26.866917566506043 28.555567279847118 22.031819727292977 27 22.595054693820128 26.852027716225248 28.33362644062233 22.219291149332303 28 21.933804649854032 26.929525283434746 28.736121369866225 22.400548696844993 29 22.631634483486334 26.9535600811321 28.278170541545027 22.13663489383654 30 22.604199641236676 26.89599380957406 28.712203815084475 21.78760273410479 31 22.514508810805108 26.85859331949867 28.554277607775553 22.072620261920672 32 21.60083476955905 26.80395812083055 28.879626698556738 22.71558041105366 33 21.771657697583624 26.69046697853282 29.334646453988018 22.203228869895536 34 22.18458724631564 26.506864572708196 28.77070802996729 22.537840151008876 35 22.056089010821523 27.334599556821782 28.489559518366104 22.119751913990598 36 22.667862544405754 26.946877234943077 28.46165570445406 21.92360451619711 37 22.85967195432216 26.743109047635798 28.12223746380125 22.274981534240794 38 22.636675928857 26.99295370077263 28.205128205128204 22.165242165242166 39 22.269002145545354 26.771950804872613 28.398227287116175 22.560819762465854 40 22.2267946959305 27.18019063698076 28.580774506700436 22.01224016038831 41 22.288816198281218 26.593389844418653 28.510897729004725 22.606896228295405 42 21.952211787602735 27.098472324809777 28.41464129529973 22.53467459228776 43 22.229608525904823 26.639818038994996 28.43234497555485 22.698228459545334 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 53.5 2 91.0 3 329.5 4 568.0 5 568.0 6 735.0 7 902.0 8 822.0 9 742.0 10 1074.5 11 1407.0 12 1407.0 13 2243.0 14 3079.0 15 5747.0 16 8415.0 17 9683.5 18 10952.0 19 10952.0 20 9917.0 21 8882.0 22 9582.5 23 10283.0 24 12796.5 25 15310.0 26 15310.0 27 18671.5 28 22033.0 29 26357.0 30 30681.0 31 34077.5 32 37474.0 33 37474.0 34 41578.0 35 45682.0 36 48603.0 37 51524.0 38 54045.5 39 56567.0 40 56567.0 41 58498.0 42 60429.0 43 59761.5 44 59094.0 45 59938.0 46 60782.0 47 60782.0 48 60011.5 49 59241.0 50 60475.5 51 61710.0 52 61053.5 53 60397.0 54 60397.0 55 55209.5 56 50022.0 57 44917.5 58 39813.0 59 35303.0 60 30793.0 61 30793.0 62 26890.0 63 22987.0 64 18955.5 65 14924.0 66 12670.5 67 10417.0 68 10417.0 69 8499.0 70 6581.0 71 5661.5 72 4742.0 73 3824.5 74 2907.0 75 2907.0 76 2163.5 77 1420.0 78 1112.0 79 804.0 80 631.5 81 459.0 82 459.0 83 381.0 84 303.0 85 269.5 86 236.0 87 195.0 88 154.0 89 154.0 90 119.5 91 85.0 92 51.5 93 18.0 94 11.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 852930.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.413779148938495 #Duplication Level Percentage of deduplicated Percentage of total 1 88.09371368337494 54.982615902439846 2 7.270351343967772 9.075402062351854 3 1.6539869320706877 3.096947252804707 4 0.7372532197334369 1.8405903853314625 5 0.4307599403897554 1.3442677892848052 6 0.25465252301867375 0.9536295798844489 7 0.18619464512185366 0.8134778021545247 8 0.15902527939466543 0.794029493378951 9 0.11760332953078872 0.6606061412863036 >10 0.9095667492623152 11.605026264305273 >50 0.11977977062566408 5.147546017373967 >100 0.0650212565495499 7.418952551729406 >500 0.0013308444290276017 0.5351632379141524 >1k 5.703618981546865E-4 0.9458505918877403 >5k 1.901206327182288E-4 0.7858949278726013 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6623 0.7764998299977723 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4466 0.5236068610554206 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2381 0.27915538203604046 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1124 0.13178103713083136 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 862 0.1010633932444632 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 2.344858311936501E-4 0.0 0.0 2 0.0 0.0 3.517287467904752E-4 0.0 0.0 3 0.0 0.0 4.689716623873002E-4 0.0 0.0 4 0.0 0.0 5.862145779841253E-4 0.0 0.0 5 1.1724291559682506E-4 0.0 7.034574935809504E-4 0.0 0.0 6 1.1724291559682506E-4 0.0 0.0018758866495492009 1.1724291559682506E-4 0.0 7 1.1724291559682506E-4 0.0 0.004103502045888877 2.344858311936501E-4 0.0 8 1.1724291559682506E-4 0.0 0.004806959539469828 2.344858311936501E-4 0.0 9 1.1724291559682506E-4 0.0 0.006213874526631728 5.862145779841253E-4 0.0 10 2.344858311936501E-4 0.0 0.007386303682599979 7.034574935809504E-4 0.0 11 2.344858311936501E-4 0.0 0.010317376572520605 9.379433247746004E-4 0.0 12 2.344858311936501E-4 0.0 0.01184153447527933 9.379433247746004E-4 0.0 13 2.344858311936501E-4 0.0 0.012779477800053932 0.0011724291559682507 0.0 14 2.344858311936501E-4 0.0 0.013482935293634882 0.0011724291559682507 0.0 15 3.517287467904752E-4 0.0 0.014772607365199957 0.0012896720715650757 0.0 16 3.517287467904752E-4 0.0 0.01594503652116821 0.001641400818355551 0.0 17 3.517287467904752E-4 0.0 0.01617952235236186 0.0018758866495492009 0.0 18 5.862145779841253E-4 0.0 0.016882979845942808 0.0018758866495492009 0.0 19 5.862145779841253E-4 0.0 0.017000222761539632 0.0018758866495492009 0.0 20 5.862145779841253E-4 0.0 0.017234708592733284 0.0018758866495492009 0.0 21 5.862145779841253E-4 0.0 0.01828989483310471 0.0023448583119365014 0.0 22 5.862145779841253E-4 0.0 0.018876109411088835 0.0024621012275333263 0.0 23 5.862145779841253E-4 0.0 0.018876109411088835 0.0030483158055174516 0.0 24 5.862145779841253E-4 0.0 0.01899335232668566 0.003986259130292052 0.0 25 5.862145779841253E-4 0.0 0.01899335232668566 0.004572473708276178 0.0 26 5.862145779841253E-4 0.0 0.01899335232668566 0.005627659948647603 0.0 27 8.207004091777755E-4 0.0 0.019110595242282487 0.006682846189019029 0.0 28 8.207004091777755E-4 0.0 0.019110595242282487 0.015007093196393607 0.0 29 8.207004091777755E-4 0.0 0.019110595242282487 0.03634530383501577 0.0 30 8.207004091777755E-4 0.0 0.019110595242282487 0.06647673314339982 0.0 31 8.207004091777755E-4 0.0 0.019110595242282487 0.12603613426658694 1.1724291559682506E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1065 0.0 24.666666 1 TTAACGG 100 2.0008883E-11 24.050001 35 CACGGTA 55 1.901913E-5 23.545454 2 GTATCAA 3020 0.0 23.461922 1 AACGGCC 115 5.456968E-12 22.52174 37 ACGGTAC 70 5.0993767E-6 21.142859 3 CGAACTA 155 1.8189894E-12 19.096775 29 GCACCGC 140 9.458745E-11 18.5 10 GTGTCGT 50 0.0070334305 18.5 28 TCCGTCG 50 0.0070334305 18.5 10 GCGAACT 180 0.0 17.472221 28 TCACGGT 75 2.0664785E-4 17.266666 1 TCCACGC 75 2.0664785E-4 17.266666 20 CCGGTTA 65 0.0015794818 17.076923 23 TAACGGC 145 2.9758667E-9 16.586206 36 TATTCCG 90 4.4437944E-5 16.444445 5 TCCGATC 80 3.381286E-4 16.1875 8 TATCAAC 4435 0.0 16.101465 2 ATCAACG 4400 0.0 16.061365 3 TCAACGC 4470 0.0 15.934004 4 >>END_MODULE