##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633288.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 978568 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.57058988235871 33.0 33.0 33.0 27.0 33.0 2 31.761386025294104 33.0 33.0 33.0 27.0 33.0 3 31.489052370402465 33.0 33.0 33.0 27.0 33.0 4 31.795143515831295 33.0 33.0 33.0 27.0 33.0 5 31.90485484912648 33.0 33.0 33.0 33.0 33.0 6 34.98366286246842 37.0 37.0 37.0 27.0 37.0 7 35.15443995716189 37.0 37.0 37.0 33.0 37.0 8 35.27621177066898 37.0 37.0 37.0 33.0 37.0 9 35.40916829489622 37.0 37.0 37.0 33.0 37.0 10 35.40293060880797 37.0 37.0 37.0 33.0 37.0 11 35.44152169292272 37.0 37.0 37.0 33.0 37.0 12 35.41737722876693 37.0 37.0 37.0 33.0 37.0 13 35.42068614546971 37.0 37.0 37.0 33.0 37.0 14 35.40608419649937 37.0 37.0 37.0 33.0 37.0 15 35.42547273158329 37.0 37.0 37.0 33.0 37.0 16 35.40716025866368 37.0 37.0 37.0 33.0 37.0 17 35.3875387300627 37.0 37.0 37.0 33.0 37.0 18 35.38244352972916 37.0 37.0 37.0 33.0 37.0 19 35.36469719017994 37.0 37.0 37.0 33.0 37.0 20 35.35766548671119 37.0 37.0 37.0 33.0 37.0 21 35.36487091341634 37.0 37.0 37.0 33.0 37.0 22 35.25708790804523 37.0 37.0 37.0 33.0 37.0 23 35.31530665216929 37.0 37.0 37.0 33.0 37.0 24 35.2969594346024 37.0 37.0 37.0 33.0 37.0 25 35.32343383392876 37.0 37.0 37.0 33.0 37.0 26 35.20547269070724 37.0 37.0 37.0 33.0 37.0 27 35.2137633766892 37.0 37.0 37.0 33.0 37.0 28 35.23812244013702 37.0 37.0 37.0 33.0 37.0 29 35.24235311189411 37.0 37.0 37.0 33.0 37.0 30 35.2367326542458 37.0 37.0 37.0 33.0 37.0 31 35.22757130827904 37.0 37.0 37.0 33.0 37.0 32 35.21995814291904 37.0 37.0 37.0 33.0 37.0 33 35.21294585557672 37.0 37.0 37.0 33.0 37.0 34 35.19554594059892 37.0 37.0 37.0 33.0 37.0 35 35.12495197063464 37.0 37.0 37.0 33.0 37.0 36 35.15623543790518 37.0 37.0 37.0 33.0 37.0 37 35.14040107585778 37.0 37.0 37.0 33.0 37.0 38 35.12759154192657 37.0 37.0 37.0 33.0 37.0 39 35.03384537405679 37.0 37.0 37.0 27.0 37.0 40 34.80621070789153 37.0 37.0 37.0 27.0 37.0 41 34.98914945103457 37.0 37.0 37.0 27.0 37.0 42 35.02833834746282 37.0 37.0 37.0 27.0 37.0 43 34.6501214018852 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 4.0 15 35.0 16 43.0 17 51.0 18 39.0 19 49.0 20 100.0 21 267.0 22 693.0 23 1592.0 24 2920.0 25 5156.0 26 8017.0 27 11712.0 28 16148.0 29 21597.0 30 27756.0 31 35042.0 32 44050.0 33 57924.0 34 83121.0 35 164300.0 36 497952.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.4058093050253 20.49249515618741 13.729347372895905 24.372348165891385 2 16.235867103767955 21.644791164231815 38.8754792717522 23.243862460248035 3 17.77648564024166 27.6122865247995 30.0011854056131 24.61004242934574 4 12.320656305949102 18.12444306374212 39.91342451418808 29.641476116120696 5 13.78688042118688 36.96544338257535 35.66241691941695 13.585259276820825 6 28.91674364990476 40.49161632099149 17.236410755307755 13.355229273795995 7 26.590998275030454 32.29341241487562 23.571994996770794 17.54359431332314 8 24.413735172210824 35.71228570727839 20.6584519420214 19.215527178489385 9 26.17978515545164 15.365309309112906 20.440582565544755 38.0143229698907 10 15.19209702340563 27.767206775614977 33.96074672378414 23.07994947719525 11 33.64038063782997 23.71874003646144 24.04390905895145 18.59697026675714 12 23.034270485035275 26.1136681354796 29.942017315097164 20.91004406438796 13 27.79459373288315 22.408764643846926 26.21371228161967 23.58292934165025 14 22.106077451950195 21.183913637069676 28.12742701580268 28.582581895177444 15 24.282727413935465 28.33722337129356 24.94635017699332 22.43369903777765 16 22.782780552807775 28.52249409340996 25.29308131882506 23.401644034957204 17 22.351538165973135 27.452461147309133 26.444559805756985 23.75144088096075 18 23.037336189207085 27.05667873872843 28.032185806198445 21.87379926586604 19 24.908948586097235 26.074529312219486 27.82300259154193 21.19351951014135 20 24.345267779040395 26.0366167706281 27.852535541730365 21.76557990860114 21 22.875160438518325 26.920254903082874 27.88360134400471 22.320983314394095 22 22.7469118139976 26.86313061534814 27.60707482770742 22.782882742946835 23 22.47518823423615 26.79169970814496 28.305033477489555 22.42807858012933 24 22.83540847442385 27.33116145224451 26.92332060725468 22.91010946607696 25 22.985423598564434 26.863334995626264 27.92968909672092 22.221552309088384 26 22.854211460010955 27.12933592760033 27.86633121050351 22.150121401885205 27 22.954255606151026 27.01028441559503 27.04380278120683 22.991657197047115 28 22.396604017298746 26.76707188463142 28.12722263552456 22.70910146254527 29 23.986989151494836 26.60438518324736 27.12780307551442 22.28082258974338 30 23.25959974166333 26.44180067200235 27.900769287366845 22.397830298967474 31 22.95364246531667 26.70146581535468 27.727659191798626 22.617232527530025 32 21.960865264345454 26.49146507958568 28.088799143237875 23.45887051283099 33 21.94022285625526 26.57117338805275 28.664129626147595 22.824474129544395 34 23.0532778509005 26.281259963538556 28.140405163463345 22.525057022097595 35 22.78441559503274 27.232343587773155 27.648359643887805 22.3348811733063 36 23.525805053915516 26.738152075277345 27.48863645653649 22.24740641427065 37 23.0241536612683 26.302106751906866 27.454402759951275 23.219336826873555 38 23.04183255532574 26.72149508261051 27.29294234023594 22.94373002182781 39 22.49021018467802 26.58067707098536 27.709878107602126 23.21923463673449 40 22.51136354346351 27.48158533694133 27.883396963726586 22.123654155868575 41 22.54988922588926 26.259289083640585 27.980886356390155 23.209935334080004 42 22.33069137760483 27.14793453290931 27.640388813041096 22.880985276444765 43 23.04111722435232 26.075551213610094 27.667162629474905 23.216168932562685 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 42.0 2 59.0 3 249.0 4 439.0 5 439.0 6 551.5 7 664.0 8 654.5 9 645.0 10 842.0 11 1039.0 12 1039.0 13 1665.5 14 2292.0 15 4246.0 16 6200.0 17 6980.5 18 7761.0 19 7761.0 20 7255.0 21 6749.0 22 7174.0 23 7599.0 24 9988.0 25 12377.0 26 12377.0 27 16047.5 28 19718.0 29 23609.0 30 27500.0 31 33189.0 32 38878.0 33 38878.0 34 46556.5 35 54235.0 36 58811.0 37 63387.0 38 66953.0 39 70519.0 40 70519.0 41 72947.5 42 75376.0 43 76684.5 44 77993.0 45 77019.5 46 76046.0 47 76046.0 48 73338.5 49 70631.0 50 72076.5 51 73522.0 52 70455.5 53 67389.0 54 67389.0 55 63765.0 56 60141.0 57 52180.0 58 44219.0 59 39808.5 60 35398.0 61 35398.0 62 31156.0 63 26914.0 64 22348.0 65 17782.0 66 15019.0 67 12256.0 68 12256.0 69 10025.5 70 7795.0 71 6612.5 72 5430.0 73 4441.0 74 3452.0 75 3452.0 76 2562.0 77 1672.0 78 1327.0 79 982.0 80 784.0 81 586.0 82 586.0 83 475.5 84 365.0 85 321.0 86 277.0 87 221.0 88 165.0 89 165.0 90 113.5 91 62.0 92 41.5 93 21.0 94 14.5 95 8.0 96 8.0 97 4.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 978568.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.367713929136364 #Duplication Level Percentage of deduplicated Percentage of total 1 86.32903956100522 46.93512526629827 2 7.828740729631978 8.512614728280193 3 2.037826645166281 3.323759282447161 4 0.9230856364815379 2.00744223265292 5 0.5421397894802268 1.4737450492031587 6 0.34157775893520176 1.1142481129406732 7 0.25784850841614204 0.9813043759836324 8 0.1843451515578087 0.8017939571294583 9 0.15322731099945275 0.7497556749494151 >10 1.1323593455880971 12.328200205456977 >50 0.14871230648427355 5.642886431543519 >100 0.11119622275344491 11.34501403319735 >500 0.007996988596479704 2.925434749900798 >1k 0.0019040449039237392 1.85867590001659 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4667 0.47692137899461257 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3292 0.3364099377866433 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1959 0.2001904824192085 No Hit GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC 1294 0.13223403994408156 No Hit TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG 1186 0.12119750492556469 No Hit GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC 1166 0.11915370214435787 No Hit CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTG 1148 0.11731427964127172 No Hit AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC 1121 0.11455514588664252 No Hit GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA 1106 0.1130222938007374 No Hit CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG 1016 0.1038251812853067 No Hit TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG 988 0.10096385739161713 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 3.065704171810237E-4 0.0 0.0 2 1.0219013906034123E-4 0.0 3.065704171810237E-4 0.0 0.0 3 1.0219013906034123E-4 0.0 3.065704171810237E-4 0.0 0.0 4 1.0219013906034123E-4 0.0 6.131408343620474E-4 1.0219013906034123E-4 0.0 5 1.0219013906034123E-4 0.0 9.197112515430711E-4 1.0219013906034123E-4 0.0 6 1.0219013906034123E-4 0.0 0.0015328520859051184 1.0219013906034123E-4 0.0 7 1.0219013906034123E-4 0.0 0.0035766548671119433 3.065704171810237E-4 0.0 8 2.0438027812068245E-4 0.0 0.004394175979594673 3.065704171810237E-4 0.0 9 2.0438027812068245E-4 0.0 0.006029218204560133 0.0012262816687240948 0.0 10 5.109506953017062E-4 0.0 0.006437978760801498 0.0014306619468447772 0.0 11 5.109506953017062E-4 0.0 0.009503682932611736 0.001737232364025801 0.0 12 5.109506953017062E-4 0.0 0.010832154740396172 0.0018394225030861423 0.0 13 5.109506953017062E-4 0.0 0.011649675852878901 0.0018394225030861423 0.0 14 5.109506953017062E-4 0.0 0.012569387104421972 0.0019416126421464835 0.0 15 7.153309734223886E-4 0.0 0.014408809607508113 0.002043802781206825 0.0 16 7.153309734223886E-4 0.0 0.015532901137171868 0.002043802781206825 0.0 17 7.153309734223886E-4 0.0 0.01583947155435289 0.002145992920267166 0.0 18 7.153309734223886E-4 0.0 0.016248232110594257 0.0022481830593275073 0.0 19 7.153309734223886E-4 0.0 0.016759182805895962 0.002656943615568872 0.0 20 7.153309734223886E-4 0.0 0.01716794336213733 0.0027591337546292133 0.0 21 8.175211124827298E-4 0.0 0.017781084196499375 0.0032700844499309193 0.0 22 8.175211124827298E-4 0.0 0.017781084196499375 0.00408760556241365 0.0 23 8.175211124827298E-4 0.0 0.017883274335559717 0.005109506953017062 0.0 24 8.175211124827298E-4 0.0 0.017883274335559717 0.006029218204560133 0.0 25 8.175211124827298E-4 0.0 0.017883274335559717 0.0065401688998618385 0.0 26 8.175211124827298E-4 0.0 0.017883274335559717 0.007255499873284227 0.0 27 9.197112515430711E-4 0.0 0.017985464474620058 0.008379591402947981 0.0 28 9.197112515430711E-4 0.0 0.017985464474620058 0.017985464474620058 0.0 29 9.197112515430711E-4 0.0 0.017985464474620058 0.034642457141455675 0.0 30 9.197112515430711E-4 0.0 0.017985464474620058 0.062335984826808154 0.0 31 9.197112515430711E-4 0.0 0.017985464474620058 0.12722672313012484 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1170 0.0 24.350426 1 GTATCAA 2780 0.0 20.895683 1 GCCGGCA 180 0.0 20.555555 15 TAATTCG 45 0.0038254077 20.555555 5 TAGGACC 315 0.0 19.968254 4 GGACCGT 75 9.263464E-6 19.733334 6 AGGACCG 70 1.2189624E-4 18.5 5 CGCCGTT 60 9.23548E-4 18.5 25 TGCGGTA 135 1.1514203E-9 17.814814 36 GGACCCT 115 6.401933E-8 17.69565 6 GTTTAGG 235 0.0 17.319149 1 CGGAATA 75 2.066871E-4 17.266666 27 ATTTCGG 215 0.0 17.209303 29 CCGGCAG 205 0.0 17.146343 16 GCCGCTC 185 1.8189894E-12 17.0 27 TGGGGCG 210 0.0 16.738094 37 TTGCGGT 155 4.0017767E-10 16.709679 35 AGCTTCG 205 0.0 16.243904 21 CGGTTGG 240 0.0 16.1875 33 GTCTTAT 70 0.0025921247 15.857142 1 >>END_MODULE