##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633281.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 545558 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79215592109363 33.0 33.0 33.0 27.0 33.0 2 31.902992899013487 33.0 33.0 33.0 33.0 33.0 3 31.61842003966581 33.0 33.0 33.0 27.0 33.0 4 31.90633993085978 33.0 33.0 33.0 33.0 33.0 5 32.015838829235385 33.0 33.0 33.0 33.0 33.0 6 35.109071812712855 37.0 37.0 37.0 33.0 37.0 7 35.28934778703639 37.0 37.0 37.0 33.0 37.0 8 35.44901733637853 37.0 37.0 37.0 33.0 37.0 9 35.57829415020951 37.0 37.0 37.0 33.0 37.0 10 35.537220607158176 37.0 37.0 37.0 33.0 37.0 11 35.55021830859414 37.0 37.0 37.0 33.0 37.0 12 35.5468511139054 37.0 37.0 37.0 33.0 37.0 13 35.562438824103026 37.0 37.0 37.0 33.0 37.0 14 35.54926698902775 37.0 37.0 37.0 33.0 37.0 15 35.58142488974591 37.0 37.0 37.0 33.0 37.0 16 35.56298688682047 37.0 37.0 37.0 33.0 37.0 17 35.544446236697105 37.0 37.0 37.0 33.0 37.0 18 35.52370600376128 37.0 37.0 37.0 33.0 37.0 19 35.51089343387871 37.0 37.0 37.0 33.0 37.0 20 35.51392519218855 37.0 37.0 37.0 33.0 37.0 21 35.504105887916594 37.0 37.0 37.0 33.0 37.0 22 35.40487354231814 37.0 37.0 37.0 33.0 37.0 23 35.44501959461689 37.0 37.0 37.0 33.0 37.0 24 35.44135912221982 37.0 37.0 37.0 33.0 37.0 25 35.4570311497586 37.0 37.0 37.0 33.0 37.0 26 35.3468998713244 37.0 37.0 37.0 33.0 37.0 27 35.35485686214848 37.0 37.0 37.0 33.0 37.0 28 35.37100179999194 37.0 37.0 37.0 33.0 37.0 29 35.36943276425238 37.0 37.0 37.0 33.0 37.0 30 35.35762467052083 37.0 37.0 37.0 33.0 37.0 31 35.33225798173613 37.0 37.0 37.0 33.0 37.0 32 35.305457898151985 37.0 37.0 37.0 33.0 37.0 33 35.26591856411234 37.0 37.0 37.0 33.0 37.0 34 35.21169518181385 37.0 37.0 37.0 33.0 37.0 35 35.12433325145997 37.0 37.0 37.0 33.0 37.0 36 35.10897833044333 37.0 37.0 37.0 33.0 37.0 37 35.07916298542043 37.0 37.0 37.0 33.0 37.0 38 35.012075709640406 37.0 37.0 37.0 27.0 37.0 39 34.87923007269621 37.0 37.0 37.0 27.0 37.0 40 34.614389304161975 37.0 37.0 37.0 27.0 37.0 41 34.726272916903426 37.0 37.0 37.0 27.0 37.0 42 34.684350701483616 37.0 37.0 37.0 27.0 37.0 43 34.303610248589514 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 4.0 15 22.0 16 49.0 17 35.0 18 36.0 19 23.0 20 49.0 21 141.0 22 329.0 23 733.0 24 1465.0 25 2617.0 26 4084.0 27 6081.0 28 8592.0 29 11691.0 30 15420.0 31 19616.0 32 24124.0 33 31315.0 34 43870.0 35 85395.0 36 289867.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.89586808368679 18.05050975331679 14.236433156511316 22.8171890064851 2 16.5124514717042 22.5086975170376 38.487750156720274 22.491100854537923 3 19.044537885980958 28.039731797535733 29.96839932692766 22.94733098955565 4 12.058112977905191 17.387702132495537 39.31314360709585 31.241041282503417 5 14.80355892499056 35.909472503381856 32.38464104641486 16.90232752521272 6 27.93525161394389 40.395521649393835 16.090681467415013 15.578545269247265 7 26.10556531111266 33.27125621840391 21.174467242712964 19.448711227770467 8 26.313792484025527 32.148735789778534 19.62577764417349 21.911694082022443 9 28.758812078642414 13.096132766818561 18.75712573181953 39.387929422719495 10 16.869883678728932 26.671774586753376 30.395301691112586 26.0630400434051 11 35.03037257266872 23.74907892469728 21.621715747913147 19.598832754720856 12 25.330212369720545 26.080270108769373 27.43411332983844 21.155404191671646 13 30.668416556993023 22.22440143852716 24.939969719076615 22.167212285403203 14 24.016328236411162 20.757279702616405 28.916632145436417 26.30975991553602 15 26.21206177894926 25.991553602000156 26.576459331546783 21.219925287503806 16 21.53813160103967 27.619244883220485 25.40518148391189 25.437442031827963 17 22.944031615336957 24.84795383808871 25.436342240421734 26.7716723061526 18 25.29410255188266 22.51456307120416 28.989035079679887 23.202299297233292 19 27.335132103277743 23.011485488252394 29.145938653635362 20.5074437548345 20 26.524035941183154 22.267476601937833 29.073719017959593 22.13476843891942 21 23.98553407703672 24.792414372074095 29.12559251262011 22.096459038269074 22 23.610321908944602 24.5170999233812 29.015979969132523 22.85659819854168 23 23.15079239970819 24.3922735987741 30.012207684609155 22.444726316908557 24 23.436921463895683 24.445613481976253 29.33546937264232 22.781995681485746 25 23.086637901011443 24.696915818299793 30.602062475483816 21.614383805204945 26 23.669893943448724 24.70589744811734 29.41098838253678 22.213220225897153 27 23.997448483937546 24.224372110756327 29.561109909487165 22.217069495818958 28 22.350510853108194 24.636243992389442 29.39155873436005 23.621686420142314 29 23.8267975174042 24.43461556791395 28.83598077564622 22.90260613903563 30 23.78537204110287 24.1792806631009 29.969315819766184 22.066031476030044 31 23.034947704918636 24.406570887055086 29.424369177979244 23.134112230047034 32 21.68733663515153 24.360929543696546 29.91304315948075 24.03869066167117 33 22.100858203893996 24.601417264525498 30.220434857522022 23.077289674058488 34 22.260144659229635 24.87251584616118 29.68556963695886 23.181769857650334 35 22.4205309059715 25.441841197452884 29.30614160180952 22.831486294766094 36 23.039346870543554 24.967464504232364 29.427485253630227 22.565703371593855 37 23.236392830826418 25.300884598887745 29.00278247225776 22.459940098028074 38 23.275985321450698 25.187422785478354 28.121299660164457 23.41529223290649 39 22.54022487068286 24.693249846945694 28.838180358458683 23.928344923912764 40 22.66945036091488 25.868560263070105 29.15070441639569 22.311284959619325 41 23.08480491533439 24.61369826856173 28.790156133719968 23.511340682383906 42 21.84094083488832 26.072021673222643 28.883638403249517 23.20339908863952 43 22.64268877002995 25.279255367898557 28.55003501002643 23.52802085204506 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 16.0 1 61.5 2 107.0 3 496.5 4 886.0 5 886.0 6 1181.0 7 1476.0 8 1447.5 9 1419.0 10 1930.0 11 2441.0 12 2441.0 13 3929.0 14 5417.0 15 9069.0 16 12721.0 17 13513.5 18 14306.0 19 14306.0 20 11265.0 21 8224.0 22 6274.0 23 4324.0 24 4531.5 25 4739.0 26 4739.0 27 5340.5 28 5942.0 29 6637.5 30 7333.0 31 8692.0 32 10051.0 33 10051.0 34 12859.0 35 15667.0 36 17054.5 37 18442.0 38 21115.0 39 23788.0 40 23788.0 41 26284.0 42 28780.0 43 31623.5 44 34467.0 45 37910.0 46 41353.0 47 41353.0 48 43446.0 49 45539.0 50 48514.5 51 51490.0 52 51062.0 53 50634.0 54 50634.0 55 46459.5 56 42285.0 57 37444.0 58 32603.0 59 29555.5 60 26508.0 61 26508.0 62 22742.0 63 18976.0 64 14787.0 65 10598.0 66 9420.0 67 8242.0 68 8242.0 69 6932.5 70 5623.0 71 4757.5 72 3892.0 73 3765.5 74 3639.0 75 3639.0 76 2813.0 77 1987.0 78 1417.5 79 848.0 80 554.5 81 261.0 82 261.0 83 218.0 84 175.0 85 178.5 86 182.0 87 140.0 88 98.0 89 98.0 90 79.5 91 61.0 92 37.5 93 14.0 94 9.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 545558.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.15528213603952 #Duplication Level Percentage of deduplicated Percentage of total 1 82.31081862037976 32.229033259293445 2 8.75312995732674 6.854625461050961 3 2.686331235458633 3.155521723057151 4 1.376657760584957 2.1561369208188936 5 0.8197030523967875 1.6047852142184498 6 0.5741793847293546 1.3489293483465277 7 0.39130024248514794 1.072502997608465 8 0.32673776246876846 1.0234807419170313 9 0.25685457303961107 0.9051491947768147 >10 1.9714635576145123 15.789867643874159 >50 0.30344676859417163 8.415688144607294 >100 0.20978445891783687 16.037090405898272 >500 0.015291805661436857 3.844942430209238 >1k 0.0033450824884393125 2.3145621617445267 >5k 9.557378538398036E-4 3.2476843525787995 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9998 1.8326190799145097 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7359 1.3488941597410358 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3829 0.7018502157424141 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2000 0.3665971354099839 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 1534 0.28118000285945766 No Hit GTATGAAACTGCTCGCCGGCAGCTTCGCCGCTCTCTTCCTGAG 1467 0.2688989988232232 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1367 0.250569142052724 No Hit CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT 1106 0.20272821588172113 No Hit GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG 1067 0.19557957174122642 No Hit TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA 988 0.18109898489253204 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 971 0.1779829092415472 No Hit GTATGAAACTGCTTGTCCGGCGAGTCGCCGTCCGCCGCCTGGG 899 0.16478541236678776 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 879 0.16111944101268794 No Hit GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC 846 0.15507058827842318 No Hit ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA 751 0.13765722434644898 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 742 0.13600753723710404 No Hit TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT 663 0.12152695038840967 No Hit GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA 640 0.11731108333119485 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 634 0.11621129192496489 No Hit GGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAA 622 0.114011709112505 No Hit TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACAC 620 0.113645111977095 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 619 0.11346181340939003 No Hit CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA 614 0.11254532057086507 No Hit GGTATTAACTTTACTCCCTTCCTCCCCGCTGAAAGTACTTTAC 606 0.11107893202922513 No Hit GTATCAACGCAGAGTACGGGGATTTCACATCTGACTTAACAAA 604 0.11071233489381514 No Hit CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA 595 0.10906264778447021 No Hit GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC 595 0.10906264778447021 No Hit GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT 593 0.10869605064906024 No Hit CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG 588 0.10777955781053528 No Hit GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATC 584 0.1070463635397153 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 575 0.10539667643037039 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 560 0.1026471979147955 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 549 0.1006309136700406 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0012830899739349436 0.0 0.0 2 0.0 0.0 0.0018329856770499195 0.0 0.0 3 0.0 0.0 0.0029327770832798714 0.0 0.0 4 0.0 0.0 0.003665971354099839 1.8329856770499196E-4 0.0 5 0.0 0.0 0.004765762760329791 1.8329856770499196E-4 0.0 6 0.0 0.0 0.00934822695295459 1.8329856770499196E-4 0.0 7 0.0 0.0 0.01979624531213913 3.665971354099839E-4 0.0 8 0.0 0.0 0.02437870950476393 3.665971354099839E-4 0.0 9 1.8329856770499196E-4 0.0 0.030794159374438648 0.0012830899739349436 0.0 10 0.0016496871093449276 0.0 0.03574322070247343 0.0012830899739349436 0.0 11 0.0018329856770499195 0.0 0.05132359895739775 0.0012830899739349436 0.0 12 0.0018329856770499195 0.0 0.05663925742084251 0.0014663885416399357 0.0 13 0.0018329856770499195 0.0 0.05938873593641739 0.0016496871093449276 0.0 14 0.0018329856770499195 0.0 0.06360460299363221 0.0018329856770499195 0.0 15 0.0018329856770499195 0.0 0.07020335143101192 0.0020162842447549113 0.0 16 0.0020162842447549113 0.0 0.07570230846216168 0.0020162842447549113 0.0 17 0.0020162842447549113 0.0 0.0773519955715066 0.0021995828124599034 0.0 18 0.0021995828124599034 0.0 0.07955157838396651 0.0023828813801648955 0.0 19 0.0021995828124599034 0.0 0.08065136979019646 0.0023828813801648955 0.0 20 0.002566179947869887 0.0 0.08230105689954138 0.0034826727863948473 0.0 21 0.0027494785155748793 0.0 0.08578372968593623 0.005315658463444767 0.0 22 0.0027494785155748793 0.0 0.08780001393069115 0.006782047005084702 0.0 23 0.0027494785155748793 0.0 0.08834990963380612 0.009531525520659582 0.0 24 0.0027494785155748793 0.0 0.08853320820151112 0.012281004036234461 0.0 25 0.0027494785155748793 0.0 0.08871650676921611 0.013747392577874397 0.0 26 0.0027494785155748793 0.0 0.08871650676921611 0.015580378254924317 0.0 27 0.0027494785155748793 0.0 0.08871650676921611 0.017230065364269243 0.0 28 0.0029327770832798714 0.0 0.08871650676921611 0.041792073436738165 0.0 29 0.0029327770832798714 0.0 0.08871650676921611 0.09274907525872593 0.0 30 0.0029327770832798714 0.0 0.08871650676921611 0.16753489088236265 0.0 31 0.0029327770832798714 0.0 0.08871650676921611 0.28612906418749245 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTATGC 25 0.0054938435 29.6 1 TAGTACA 25 0.0054938435 29.6 4 TGGTACT 35 8.863397E-4 26.428572 5 GGTATCA 1635 0.0 24.666668 1 GTATTGC 45 1.3219676E-4 24.666666 1 TTAACGG 115 0.0 24.130436 35 ACTAGTG 70 1.9190702E-7 23.785715 8 AACGGCC 125 0.0 23.680002 37 GACACAT 135 0.0 23.296297 26 GTGACAC 135 0.0 23.296297 24 CTAGTGC 40 0.0019298942 23.125 9 CATAATA 80 2.7192073E-8 23.125 2 GTATCAA 4210 0.0 22.982183 1 GTTTAAC 130 0.0 22.76923 33 TAAGAAC 50 2.699581E-4 22.2 3 TTCGCCG 425 0.0 21.764706 24 AGTGACA 145 0.0 21.689655 23 TCGTCTG 60 3.7216687E-5 21.583334 23 GCCGCTC 415 0.0 21.39759 27 TGCTCGC 460 0.0 21.315218 10 >>END_MODULE