ERR1633228.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1633228.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	474668
Sequences flagged as poor quality	0
Sequence length	43
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4200	0.8848289751995078	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	3125	0.6583548922615385	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	1662	0.3501394659003767	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	845	0.17801916286752004	No Hit
ATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAA	554	0.11671315530012555	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA	521	0.10976092763784372	No Hit
GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG	518	0.10912890694127263	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	475	0.10006994362375386	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACGC	25	0.0054931333	29.6	3
CGCCTGG	65	9.3676135E-8	25.615385	36
CCGTCCG	85	1.9699655E-9	23.941177	28
CGTCCGC	85	1.9699655E-9	23.941177	29
GGTATCA	720	0.0	22.868055	1
TCGCCGT	90	3.814421E-9	22.61111	25
CGCCGTC	90	3.814421E-9	22.61111	26
GCCGTCC	90	3.814421E-9	22.61111	27
GTATCAA	1725	0.0	21.449274	1
GGACTGC	70	5.091515E-6	21.142859	6
GACCGTT	45	0.0038225492	20.555555	7
GTGTAGA	45	0.0038225492	20.555555	1
TCCGCCG	100	1.2849341E-8	20.35	31
CGAGTCG	100	1.2849341E-8	20.35	21
GAGTCGC	100	1.2849341E-8	20.35	22
GCCGGCA	110	1.7462298E-9	20.181818	15
CGGGATA	55	5.136984E-4	20.181818	17
GGACCGT	55	5.136984E-4	20.181818	6
TTAACGG	75	9.246991E-6	19.733334	35
GTCCGCC	105	2.2509994E-8	19.38095	30