##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633220.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 556899 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.874645133139044 33.0 33.0 33.0 33.0 33.0 2 31.9909444980149 33.0 33.0 33.0 33.0 33.0 3 31.71193519830346 33.0 33.0 33.0 27.0 33.0 4 32.00152451342164 33.0 33.0 33.0 33.0 33.0 5 32.091257122027514 33.0 33.0 33.0 33.0 33.0 6 35.26244076574029 37.0 37.0 37.0 33.0 37.0 7 35.39736828401559 37.0 37.0 37.0 33.0 37.0 8 35.546411467788595 37.0 37.0 37.0 33.0 37.0 9 35.646555299973606 37.0 37.0 37.0 33.0 37.0 10 35.656961136579525 37.0 37.0 37.0 33.0 37.0 11 35.67186150450979 37.0 37.0 37.0 33.0 37.0 12 35.65789487860456 37.0 37.0 37.0 33.0 37.0 13 35.67389418907199 37.0 37.0 37.0 33.0 37.0 14 35.644323297402224 37.0 37.0 37.0 33.0 37.0 15 35.66547075861153 37.0 37.0 37.0 33.0 37.0 16 35.640033471060285 37.0 37.0 37.0 33.0 37.0 17 35.645558709927656 37.0 37.0 37.0 33.0 37.0 18 35.633057340738624 37.0 37.0 37.0 33.0 37.0 19 35.627763741719775 37.0 37.0 37.0 33.0 37.0 20 35.6210533687437 37.0 37.0 37.0 33.0 37.0 21 35.614984045580975 37.0 37.0 37.0 33.0 37.0 22 35.52798622371382 37.0 37.0 37.0 33.0 37.0 23 35.57606136839894 37.0 37.0 37.0 33.0 37.0 24 35.56968498776259 37.0 37.0 37.0 33.0 37.0 25 35.59555323317154 37.0 37.0 37.0 33.0 37.0 26 35.48461570230868 37.0 37.0 37.0 33.0 37.0 27 35.48388307395057 37.0 37.0 37.0 33.0 37.0 28 35.52316667833844 37.0 37.0 37.0 33.0 37.0 29 35.523409092133406 37.0 37.0 37.0 33.0 37.0 30 35.517190729378214 37.0 37.0 37.0 33.0 37.0 31 35.51276084173252 37.0 37.0 37.0 33.0 37.0 32 35.49585113279068 37.0 37.0 37.0 33.0 37.0 33 35.492841610417685 37.0 37.0 37.0 33.0 37.0 34 35.470650872061185 37.0 37.0 37.0 33.0 37.0 35 35.39613646280564 37.0 37.0 37.0 33.0 37.0 36 35.41885153322236 37.0 37.0 37.0 33.0 37.0 37 35.425897694195896 37.0 37.0 37.0 33.0 37.0 38 35.41344839908134 37.0 37.0 37.0 33.0 37.0 39 35.300383013796036 37.0 37.0 37.0 33.0 37.0 40 35.079621259869384 37.0 37.0 37.0 33.0 37.0 41 35.247130987845196 37.0 37.0 37.0 33.0 37.0 42 35.2799574069984 37.0 37.0 37.0 33.0 37.0 43 34.947773294618955 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 18.0 16 29.0 17 29.0 18 11.0 19 17.0 20 43.0 21 89.0 22 256.0 23 587.0 24 1148.0 25 2107.0 26 3428.0 27 5350.0 28 7612.0 29 10111.0 30 13106.0 31 17374.0 32 22365.0 33 29191.0 34 42337.0 35 85792.0 36 315897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.2230943133315 21.227727110301867 13.97973420674126 23.569444369625373 2 15.577330898421437 22.424712560087197 38.750294038955 23.247662502536368 3 17.6865104803564 27.728905959608475 30.774161921641085 23.810421638394036 4 12.02049204613404 17.954422615231845 40.97726876866361 29.047816569970497 5 13.353229221097543 37.34626925169555 35.80505621306557 13.495445314141344 6 28.436215543572533 40.932556890926364 17.426140107990857 13.205087457510247 7 25.64594298068411 32.78637598559164 24.048884986326065 17.518796047398183 8 24.796596869450298 34.697494518754745 21.54555853036188 18.960350081433077 9 26.049068143415592 15.280688239698762 20.931623148901327 37.73862046798432 10 14.640895386775698 28.59171950389568 34.256480977699724 22.510904131628894 11 32.80666691805875 24.516833393487865 24.71902445506277 17.957475233390614 12 22.872190469007844 26.29184106992471 30.676119009012403 20.159849452055038 13 27.955338400679473 22.60499659722858 26.754761635413242 22.684903366678697 14 21.619180497720414 21.654734520981364 29.075649264947508 27.650435716350717 15 23.186610139360997 29.590643904909147 25.274062262636495 21.94868369309336 16 21.91959403769804 29.121618103103074 26.13418232031302 22.824605538885866 17 21.85656645100817 28.080495745188983 27.173149888938568 22.889787914864275 18 22.30997003047231 27.421489354443086 29.18069524276395 21.087845372320654 19 24.204029815101123 26.546465337520807 28.91781094956177 20.3316938978163 20 24.11047604682357 26.56244669141083 28.30980123864471 21.01727602312089 21 22.471579227112993 27.089113106685414 28.70251158648157 21.736796079720023 22 21.98316032171004 27.389347080888992 28.90991005550378 21.717582541897183 23 22.112447679022587 26.95300224995915 29.06487531850479 21.869674752513472 24 21.84130336021433 27.405508000553063 28.57932946548656 22.173859173746045 25 22.370842827873634 27.660670965471297 28.488828315367776 21.47965789128729 26 22.503721500667087 27.490801743224537 28.528871482979856 21.47660527312852 27 22.33205662067987 27.26921757805275 28.385039297969648 22.013686503297723 28 22.14818126805758 27.21462958274301 28.749198687733323 21.887990461466085 29 22.63157233178727 27.425798933020168 28.346971353872068 21.59565738132049 30 22.8438190767087 26.951027026444653 28.40299587537417 21.802158021472476 31 22.14566734722095 27.549519751337314 28.647564459623737 21.657248441817995 32 21.432432092713398 27.35882089930131 28.818690642288818 22.390056365696474 33 21.237603227874356 27.393836225240126 29.44573432525467 21.922826221630853 34 22.528681143259373 26.767869936918544 28.743093451415785 21.960355468406302 35 21.945990206482684 27.490263045902395 28.45165820014042 22.1120885474745 36 22.18840400144371 27.414845420803413 28.727830360621944 21.668920217130935 37 22.294527373904423 26.846160614402255 28.762127423464577 22.097184588228746 38 22.592426993045418 27.060382582838184 28.334940447011036 22.012249977105363 39 22.042955724467095 27.2805302218176 28.55508808599046 22.121425967724846 40 21.87757564657146 27.458659469670444 28.834133298856706 21.829631584901392 41 21.74954524967723 26.699455377007318 28.891235215003082 22.659764158312367 42 21.656530178721813 27.380548357960777 28.817792813418592 22.145128649898815 43 22.149438228475898 27.03470467714972 28.720647729660136 22.095209364714247 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 55.0 1 65.0 2 75.0 3 297.5 4 520.0 5 520.0 6 576.5 7 633.0 8 585.0 9 537.0 10 725.5 11 914.0 12 914.0 13 1477.0 14 2040.0 15 3517.5 16 4995.0 17 5972.5 18 6950.0 19 6950.0 20 6887.5 21 6825.0 22 7795.5 23 8766.0 24 10829.5 25 12893.0 26 12893.0 27 15077.5 28 17262.0 29 19347.5 30 21433.0 31 23814.0 32 26195.0 33 26195.0 34 28605.0 35 31015.0 36 32952.5 37 34890.0 38 35649.5 39 36409.0 40 36409.0 41 37112.0 42 37815.0 43 37643.0 44 37471.0 45 37333.0 46 37195.0 47 37195.0 48 36870.0 49 36545.0 50 36401.0 51 36257.0 52 35591.0 53 34925.0 54 34925.0 55 32888.5 56 30852.0 57 27591.0 58 24330.0 59 22581.0 60 20832.0 61 20832.0 62 18498.0 63 16164.0 64 13967.5 65 11771.0 66 9721.5 67 7672.0 68 7672.0 69 6469.0 70 5266.0 71 4581.5 72 3897.0 73 2742.5 74 1588.0 75 1588.0 76 1131.5 77 675.0 78 538.0 79 401.0 80 335.5 81 270.0 82 270.0 83 227.5 84 185.0 85 170.5 86 156.0 87 140.5 88 125.0 89 125.0 90 98.5 91 72.0 92 49.0 93 26.0 94 14.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 556899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.548764076295136 #Duplication Level Percentage of deduplicated Percentage of total 1 89.31716037920131 56.7599515290248 2 6.204702512691128 7.886023522852083 3 1.42214867885664 2.711273726222263 4 0.690643472024569 1.755581562580907 5 0.42588508912224327 1.3532235526120682 6 0.29251263670932803 1.1153289923745668 7 0.22386862710181288 0.9958602197444039 8 0.16546533746310454 0.8412094154597911 9 0.12641879480396206 0.7230382349225896 >10 0.9519804322811101 12.200827192200087 >50 0.11623147192730292 5.049836691456299 >100 0.06097857702335086 6.6893914287963225 >500 8.588531975119742E-4 0.35185300180293183 >1k 0.0011451375966826324 1.5666009299509027 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3619 0.6498485362695929 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2516 0.451787487497733 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1343 0.2411568345427088 No Hit GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA 1133 0.20344802199321602 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 738 0.13251954124536047 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 609 0.10935555639352916 No Hit ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC 587 0.10540510936453468 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 5.386973221356117E-4 0.0 0.0 0.0 0.0 3 5.386973221356117E-4 0.0 0.0 0.0 0.0 4 5.386973221356117E-4 0.0 0.0 0.0 0.0 5 5.386973221356117E-4 0.0 1.7956577404520387E-4 0.0 0.0 6 5.386973221356117E-4 0.0 3.5913154809040775E-4 0.0 0.0 7 5.386973221356117E-4 0.0 0.001436526192361631 0.0 0.0 8 5.386973221356117E-4 0.0 0.0017956577404520389 0.0 0.0 9 5.386973221356117E-4 0.0 0.002873052384723262 5.386973221356117E-4 0.0 10 7.182630961808155E-4 0.0 0.003950447028994486 7.182630961808155E-4 0.0 11 7.182630961808155E-4 0.0 0.004668710125175301 8.978288702260194E-4 0.0 12 7.182630961808155E-4 0.0 0.004848275899220505 8.978288702260194E-4 0.0 13 7.182630961808155E-4 0.0 0.005207407447310913 8.978288702260194E-4 0.0 14 7.182630961808155E-4 0.0 0.005925670543491728 8.978288702260194E-4 0.0 15 7.182630961808155E-4 0.0 0.0066439336396725435 8.978288702260194E-4 0.0 16 7.182630961808155E-4 0.0 0.007003065187762952 8.978288702260194E-4 0.0 17 7.182630961808155E-4 0.0 0.007003065187762952 8.978288702260194E-4 0.0 18 7.182630961808155E-4 0.0 0.007003065187762952 8.978288702260194E-4 0.0 19 7.182630961808155E-4 0.0 0.007003065187762952 0.0010773946442712234 0.0 20 7.182630961808155E-4 0.0 0.00736219673585336 0.001616091966406835 0.0 21 7.182630961808155E-4 0.0 0.00736219673585336 0.001975223514497243 0.0 22 7.182630961808155E-4 0.0 0.00736219673585336 0.0023343550625876505 0.0 23 7.182630961808155E-4 0.0 0.007541762509898563 0.00323218393281367 0.0 24 7.182630961808155E-4 0.0 0.007541762509898563 0.005207407447310913 0.0 25 7.182630961808155E-4 0.0 0.007541762509898563 0.005925670543491728 0.0 26 7.182630961808155E-4 0.0 0.007541762509898563 0.007003065187762952 0.0 27 7.182630961808155E-4 0.0 0.007541762509898563 0.008798722928214991 0.0 28 7.182630961808155E-4 0.0 0.007541762509898563 0.020111366693062835 0.0 29 7.182630961808155E-4 0.0 0.007541762509898563 0.044532311963210565 0.0 30 7.182630961808155E-4 0.0 0.007541762509898563 0.07882937480584451 0.0 31 7.182630961808155E-4 0.0 0.007541762509898563 0.13826564601480698 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCCGA 45 1.3220156E-4 24.666666 10 CTTCGCA 40 0.0019299441 23.125 9 TGCGTTA 40 0.0019299441 23.125 37 GTATCAA 1455 0.0 22.632303 1 TTTGCCG 50 2.6996783E-4 22.2 9 GGTATCA 520 0.0 22.057692 1 CCGGCTT 45 0.0038233683 20.555555 25 CGCTCTC 45 0.0038233683 20.555555 29 GCGGCTT 45 0.0038233683 20.555555 36 ATGCGTT 45 0.0038233683 20.555555 36 TGCGTTT 45 0.0038233683 20.555555 24 TAGTACC 90 9.456198E-8 20.555555 4 TAGTACA 65 6.893968E-5 19.923077 4 GCTTTAT 245 0.0 19.632652 1 CTCGTCT 100 2.8683098E-7 18.5 13 CTATCGG 100 2.8683098E-7 18.5 12 ATCGGTC 100 2.8683098E-7 18.5 14 ATAGTAC 120 5.156835E-9 18.5 3 TGCCGAG 60 9.228666E-4 18.5 11 TAGGACC 115 6.387381E-8 17.695652 4 >>END_MODULE