Basic Statistics
Measure | Value |
---|---|
Filename | ERR1633165.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 367120 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 2480 | 0.6755284375680977 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1886 | 0.5137284811505775 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 1194 | 0.32523425582915666 | No Hit |
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA | 587 | 0.1598932229243844 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 485 | 0.1321093920244062 | No Hit |
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA | 399 | 0.10868380910873827 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATATCGC | 20 | 0.0018403047 | 37.0 | 6 |
GTGTCGT | 20 | 0.0018403047 | 37.0 | 6 |
GGTATCA | 640 | 0.0 | 28.328125 | 1 |
TGTCCGG | 45 | 1.3208165E-4 | 24.666668 | 14 |
CGAGTCG | 45 | 0.003820923 | 20.555557 | 21 |
GTATCAA | 1400 | 0.0 | 19.953571 | 1 |
GTAAGAC | 65 | 6.885787E-5 | 19.923077 | 3 |
TAACTAG | 65 | 6.885787E-5 | 19.923077 | 26 |
TCACCCG | 50 | 0.007025987 | 18.5 | 5 |
CTATACC | 110 | 3.830428E-8 | 18.5 | 4 |
GTACATG | 130 | 1.384069E-8 | 17.076923 | 1 |
GTCCGGC | 65 | 0.0015771661 | 17.076923 | 15 |
ATAGGTT | 230 | 0.0 | 16.891304 | 17 |
TAGGTTA | 230 | 0.0 | 16.891304 | 18 |
TAACTGA | 235 | 0.0 | 16.531916 | 6 |
ACCAACG | 90 | 4.4327076E-5 | 16.444445 | 30 |
CGCTTCC | 90 | 4.4327076E-5 | 16.444445 | 26 |
CATAGGT | 240 | 0.0 | 16.1875 | 16 |
GGCGAAC | 240 | 0.0 | 16.1875 | 29 |
CATGCTA | 140 | 3.450441E-8 | 15.857142 | 4 |