##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633162.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 947590 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.838303485684737 33.0 33.0 33.0 27.0 33.0 2 31.95191591300035 33.0 33.0 33.0 33.0 33.0 3 31.680801823573486 33.0 33.0 33.0 27.0 33.0 4 31.967336084171425 33.0 33.0 33.0 33.0 33.0 5 32.05933262275879 33.0 33.0 33.0 33.0 33.0 6 35.2203231355333 37.0 37.0 37.0 33.0 37.0 7 35.36417860044956 37.0 37.0 37.0 33.0 37.0 8 35.49072172564084 37.0 37.0 37.0 33.0 37.0 9 35.61465929357634 37.0 37.0 37.0 33.0 37.0 10 35.611482814297325 37.0 37.0 37.0 33.0 37.0 11 35.62243164237698 37.0 37.0 37.0 33.0 37.0 12 35.613546998174314 37.0 37.0 37.0 33.0 37.0 13 35.620771641743794 37.0 37.0 37.0 33.0 37.0 14 35.60478160385821 37.0 37.0 37.0 33.0 37.0 15 35.61140472145126 37.0 37.0 37.0 33.0 37.0 16 35.611578847391804 37.0 37.0 37.0 33.0 37.0 17 35.59701980814487 37.0 37.0 37.0 33.0 37.0 18 35.58235734864235 37.0 37.0 37.0 33.0 37.0 19 35.58205025380175 37.0 37.0 37.0 33.0 37.0 20 35.58206291750652 37.0 37.0 37.0 33.0 37.0 21 35.5822592049304 37.0 37.0 37.0 33.0 37.0 22 35.48693316729809 37.0 37.0 37.0 33.0 37.0 23 35.52631517850547 37.0 37.0 37.0 33.0 37.0 24 35.52339513924799 37.0 37.0 37.0 33.0 37.0 25 35.542780105319814 37.0 37.0 37.0 33.0 37.0 26 35.43590687955761 37.0 37.0 37.0 33.0 37.0 27 35.44513133317152 37.0 37.0 37.0 33.0 37.0 28 35.482322523454236 37.0 37.0 37.0 33.0 37.0 29 35.48406378285968 37.0 37.0 37.0 33.0 37.0 30 35.473988750408935 37.0 37.0 37.0 33.0 37.0 31 35.458268871558374 37.0 37.0 37.0 33.0 37.0 32 35.46027606876392 37.0 37.0 37.0 33.0 37.0 33 35.46687280363871 37.0 37.0 37.0 33.0 37.0 34 35.44439156175139 37.0 37.0 37.0 33.0 37.0 35 35.38018974450976 37.0 37.0 37.0 33.0 37.0 36 35.41151869479416 37.0 37.0 37.0 33.0 37.0 37 35.40873479036292 37.0 37.0 37.0 33.0 37.0 38 35.39756645806731 37.0 37.0 37.0 33.0 37.0 39 35.30552137527834 37.0 37.0 37.0 33.0 37.0 40 35.10783777794194 37.0 37.0 37.0 33.0 37.0 41 35.27359828617862 37.0 37.0 37.0 33.0 37.0 42 35.30479954410663 37.0 37.0 37.0 33.0 37.0 43 34.97214829198282 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 36.0 16 46.0 17 37.0 18 33.0 19 32.0 20 55.0 21 151.0 22 433.0 23 1035.0 24 2134.0 25 3727.0 26 6155.0 27 9546.0 28 12925.0 29 17781.0 30 23153.0 31 29926.0 32 38291.0 33 50502.0 34 73457.0 35 147477.0 36 530655.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.793075064110006 20.019734273261644 13.331293069787566 24.855897592840787 2 16.51832543610633 20.75992781688283 39.00906510199559 23.712681645015248 3 17.7780474677867 27.15689274897371 29.517723910129906 25.547335873109677 4 12.439240599837483 17.392015534144516 39.61660633818423 30.552137527833768 5 13.805232220686161 37.23688515075085 35.21164216591564 13.746240462647346 6 29.909665572663286 39.55318228347703 17.010732489789888 13.526419654069798 7 27.232347323209403 31.830327462299095 23.245602000865354 17.691723213626144 8 24.899376312540234 35.5139881172237 20.101837292499923 19.48479827773615 9 26.469359111007922 14.946865205415843 19.86734769256746 38.716427991008764 10 15.808208191306367 27.445097563292144 33.20718876307264 23.539505482328853 11 34.43831192815458 23.4593020188056 23.441678363005096 18.66070769003472 12 23.826338395297544 25.787102016694984 28.927595267995653 21.45896432001182 13 27.750081786426616 22.012895872687555 25.83469644044365 24.40232590044217 14 22.189237961565656 20.531559007587667 27.588725081522597 29.690477949324073 15 24.666575206576685 27.80537996390844 24.714802815563694 22.813242013951182 16 23.25056195189903 27.763167614685674 24.69950083897044 24.286769594444856 17 22.73736531622326 27.076372692831285 25.695395688008528 24.490866302936926 18 23.344062305427453 26.586920503593326 27.567724437784275 22.501292753194946 19 25.59556348209669 25.518103821272913 26.769277852235675 22.11705484439473 20 24.50131385936956 25.816439599404806 27.345054295634185 22.337192245591446 21 23.785603478297578 26.498274570225522 27.12491689443747 22.59120505703944 22 23.369600776707227 26.509144250150378 26.844732426471364 23.27652254667103 23 23.224706888000085 26.439704935678932 27.617429478994083 22.718158697326903 24 23.66614252999715 27.02941145432096 25.792589622093942 23.511856393587944 25 23.38891292647664 26.58808134319695 27.44414778543463 22.578857944891777 26 23.73146614041938 26.641374434090693 27.363311136673037 22.26384828881689 27 23.714370138984158 26.508300003165925 26.134404119925286 23.64292573792463 28 22.639221604280333 26.16363617176205 27.80654080351207 23.39060142044555 29 24.77843793201701 25.9185934845239 26.528984054285083 22.77398452917401 30 23.925854008590214 25.666058105298706 27.47622917084393 22.93185871526715 31 23.410546755453307 26.174505851686913 27.306957650460646 23.107989742399138 32 22.24432507730136 25.924503213415086 27.693728300214225 24.137443409069324 33 22.5295750271742 26.26895598307285 27.92368007260524 23.277788917147713 34 23.399149421163163 26.189913359153223 27.673782965206474 22.737154254477147 35 23.491488935087958 26.70310999482899 26.925569075232957 22.879831994850093 36 24.341645648434447 26.399181080425077 26.30103736848215 22.958135902658324 37 23.28570373262698 25.898120495150856 26.83016916598951 23.986006606232653 38 23.867706497535853 26.259141611878555 26.640846779725408 23.23230511086018 39 22.688926645490138 26.42471955170485 27.256724954885552 23.62962884791946 40 23.239164617608882 26.84082778416826 27.40752857248388 22.51247902573898 41 22.867062759210206 25.702466256503342 27.56086493103557 23.869606053250877 42 22.526725693601662 26.99078715478213 27.120273536022964 23.36221361559324 43 23.758587574795005 25.22420033980941 27.167340305406345 23.849871779989236 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 27.0 1 45.5 2 64.0 3 243.0 4 422.0 5 422.0 6 520.5 7 619.0 8 582.5 9 546.0 10 722.5 11 899.0 12 899.0 13 1498.5 14 2098.0 15 3676.0 16 5254.0 17 5962.5 18 6671.0 19 6671.0 20 6097.5 21 5524.0 22 5740.5 23 5957.0 24 7798.0 25 9639.0 26 9639.0 27 12708.5 28 15778.0 29 19010.5 30 22243.0 31 27099.5 32 31956.0 33 31956.0 34 40280.5 35 48605.0 36 53391.0 37 58177.0 38 63032.5 39 67888.0 40 67888.0 41 71263.5 42 74639.0 43 76678.5 44 78718.0 45 76429.5 46 74141.0 47 74141.0 48 70491.5 49 66842.0 50 67977.0 51 69112.0 52 66141.0 53 63170.0 54 63170.0 55 63028.0 56 62886.0 57 54180.5 58 45475.0 59 41375.0 60 37275.0 61 37275.0 62 33760.0 63 30245.0 64 24293.0 65 18341.0 66 15482.0 67 12623.0 68 12623.0 69 10768.0 70 8913.0 71 7728.5 72 6544.0 73 6871.0 74 7198.0 75 7198.0 76 6135.0 77 5072.0 78 3786.0 79 2500.0 80 1573.5 81 647.0 82 647.0 83 511.0 84 375.0 85 319.5 86 264.0 87 199.5 88 135.0 89 135.0 90 110.0 91 85.0 92 52.0 93 19.0 94 11.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 947590.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.124633891518265 #Duplication Level Percentage of deduplicated Percentage of total 1 84.68516429082023 39.907573632479796 2 8.581528561002848 8.088027833337335 3 2.3100013713053835 3.26573906735014 4 1.0181646336299868 1.9192254240441982 5 0.5976532354931994 1.4082094958349185 6 0.400658109471708 1.1328520034713252 7 0.30431877110427386 1.0038637472223957 8 0.22252622190829194 0.8389173390952807 9 0.16876168890956647 0.7157549524299858 >10 1.337932501835976 12.823639371928541 >50 0.19052008032122386 6.31372024343933 >100 0.16613431350506716 15.331130227614084 >500 0.012989925746050957 4.328835195597374 >1k 0.0036462949462599177 2.9225114661553864 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4192 0.44238541985457847 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2939 0.3101552359142667 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 2233 0.23565043953608628 No Hit GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC 1937 0.2044133011112401 No Hit GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC 1737 0.18330712649985753 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1697 0.179085891577581 No Hit TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG 1634 0.17243744657499552 No Hit AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC 1494 0.15766312434702773 No Hit GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA 1493 0.1575575934739708 No Hit CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTG 1326 0.13993393767346637 No Hit TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG 1172 0.12368218322270179 No Hit GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG 1131 0.11935541742736837 No Hit CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG 1129 0.11914435568125455 No Hit GTACCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAA 1052 0.11101847845587226 No Hit GATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCAC 1030 0.10869679924862018 No Hit GTACCTAACAAACCCACAGGTCCTAAACTACCAAACCTGCATT 1017 0.10732489789888032 No Hit CCTTTAATAGCGGCTGCACCATCGGGATGTCCTGATCCAACAT 1000 0.1055308730569128 No Hit CTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAG 997 0.10521428043774206 No Hit ACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTT 977 0.10310366297660381 No Hit GTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGGGCAGGCG 975 0.10289260123048999 No Hit CCATAGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCA 952 0.100465391150181 No Hit ATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCAT 951 0.10035986027712408 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.055308730569128E-4 0.0 4 0.0 0.0 2.110617461138256E-4 3.165926191707384E-4 0.0 5 0.0 0.0 4.221234922276512E-4 4.221234922276512E-4 0.0 6 0.0 0.0 9.497778575122152E-4 4.221234922276512E-4 0.0 7 0.0 0.0 0.0025327409533659074 5.27654365284564E-4 0.0 8 0.0 0.0 0.003165926191707384 6.331852383414768E-4 0.0 9 0.0 0.0 0.004115704049219599 0.0022161483341951688 0.0 10 0.0 0.0 0.0051710127797887275 0.0024272100803089942 0.0 11 0.0 0.0 0.008548000717609937 0.0024272100803089942 0.0 12 0.0 0.0 0.009286716829008326 0.0024272100803089942 0.0 13 0.0 0.0 0.01013096381346363 0.0024272100803089942 0.0 14 1.055308730569128E-4 0.0 0.010447556432634368 0.0024272100803089942 0.0 15 1.055308730569128E-4 0.0 0.011080741670975844 0.0025327409533659074 0.0 16 1.055308730569128E-4 0.0 0.01245264302071571 0.0025327409533659074 0.0 17 1.055308730569128E-4 0.0 0.012874766512943362 0.0028493335725366456 0.0 18 1.055308730569128E-4 0.0 0.012980297386000275 0.0028493335725366456 0.0 19 1.055308730569128E-4 0.0 0.012980297386000275 0.0028493335725366456 0.0 20 1.055308730569128E-4 0.0 0.012980297386000275 0.003060395318650471 0.0 21 1.055308730569128E-4 0.0 0.013402420878227926 0.0033769879378212097 0.0 22 1.055308730569128E-4 0.0 0.013719013497398664 0.004115704049219599 0.0 23 1.055308730569128E-4 0.0 0.01393007524351249 0.00453782754144725 0.0 24 2.110617461138256E-4 0.0 0.014035606116569403 0.004748889287561076 0.0 25 2.110617461138256E-4 0.0 0.014035606116569403 0.005065481906731815 0.0 26 2.110617461138256E-4 0.0 0.014035606116569403 0.006226321510357855 0.0 27 2.110617461138256E-4 0.0 0.014035606116569403 0.007387161113983896 0.0 28 2.110617461138256E-4 0.0 0.014035606116569403 0.015301976593252355 0.0 29 2.110617461138256E-4 0.0 0.014035606116569403 0.031237138424846187 0.0 30 2.110617461138256E-4 0.0 0.014035606116569403 0.05181565867094418 0.0 31 2.110617461138256E-4 0.0 0.014035606116569403 0.10669171266053884 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 835 0.0 27.02994 1 GCCGGCA 185 0.0 26.0 15 CCGCTCT 175 0.0 24.314287 28 CGCTCTC 175 0.0 24.314287 29 GTATCAA 2345 0.0 22.799574 1 TTCGCCG 190 0.0 22.394737 24 GCCGCTC 210 0.0 21.142857 27 CCGGCAG 220 0.0 21.02273 16 TCGAGTC 55 5.142176E-4 20.18182 31 GCCTAAG 65 6.900494E-5 19.923077 1 GCTTCGC 240 0.0 19.270834 22 TGCGGGT 125 4.129106E-10 19.240002 21 TCTATAC 110 3.8495273E-8 18.500002 3 TGCGGTA 140 9.458745E-11 18.5 36 TGCTCGC 260 0.0 18.5 10 ACCGTGG 50 0.007033993 18.5 8 CCTTGCG 140 9.458745E-11 18.5 33 ATCAAGC 640 0.0 18.210938 30 AGCTTCG 245 0.0 18.12245 21 TGCATCA 635 0.0 18.062992 14 >>END_MODULE