ERR1633109.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1633109.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	441317
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1113	0.25219966599972354	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	747	0.1692660831103266	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC	590	0.13369074837361805	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	506	0.11465681131703515	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	484	0.10967173256412058	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC	469	0.10627281523258791	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA	462	0.104686653811206	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	449	0.10174092545721103	No Hit
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG	445	0.10083454750213566	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGAGT	30	3.5959168E-4	30.833334	12
GTATCAA	710	0.0	25.535212	1
CCGAGTT	40	0.0019293126	23.125	13
TGCCGAG	50	2.698449E-4	22.199999	11
CGAAATT	85	5.162474E-8	21.764706	20
GGTATCA	225	0.0	21.377777	1
TATATCG	45	0.0038221295	20.555555	5
CGATGTC	45	0.0038221295	20.555555	23
CCCGCTG	45	0.0038221295	20.555555	25
ACGAAAT	45	0.0038221295	20.555555	19
TTTCGGG	55	5.1361945E-4	20.18182	22
TCGTTTG	70	1.2170382E-4	18.5	12
CCTACAT	70	1.2170382E-4	18.5	3
CCGTGCC	50	0.007028185	18.499998	9
CCTACCG	50	0.007028185	18.499998	24
ACGGGGT	100	2.864963E-7	18.499998	16
TTTGCCG	50	0.007028185	18.499998	9
CCGAAAT	50	0.007028185	18.499998	19
ATACGAA	50	0.007028185	18.499998	17
TGAGCGT	50	0.007028185	18.499998	31